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The map label for this gene is 52842527

Identifier: 52842527

GI number: 52842527

Start: 2618685

End: 2619845

Strand: Direct

Name: 52842527

Synonym: lpg2317

Alternate gene names: NA

Gene position: 2618685-2619845 (Clockwise)

Preceding gene: 52842526

Following gene: 52842528

Centisome position: 77.07

GC content: 37.21

Gene sequence:

>1161_bases
ATGACTCGAACTAAAAAATCTGCAAGACAGATTGAGTATCGCCATATTGCATGCAGCTTTCAGGGAGGAGGGGCTTTGGG
TGCCTATCAAGCTGGAGTATTGCATGCTTTAAATGAAGTGGGATACCACCCTCATTGGTACGTGGGAACCTCAATTGGAG
CAATTAATGCGGCGATTGCTGCAGGTAACTCTGACAAAGAGCGGATAGAAAAAATGTATCAATTTTGGGAGTCTATAGCT
ACTCCGTCCGCAGTCAATGAATCAACTCTCCTCGATGATAAGATAAGTCGGAAAATTCAACATTTAATTGCTGCTCATTC
CGCTTTACTCTTGGGACAGCCAGGTTTTTTTGTACCTCGTTTCCCTTCCCCTGATTTTGGTTGGCATAACAGCCCTGATT
TATTAAGTTACTATGATACTTCTCCTTTGCATAAAAGTTTGGAAAAATTTATTGATTTTGATCGTCTGAATAACAATAAA
TTAACCCGAATCAGTGTAGGAGCAGTTGAAGTAAGTAGTGGAATGATGACTTATTTTGATTCCTATAAACAAAAAATAGG
ACCTGAACACATTATGGCAAGCGGTGCGCTTCCTCCCGGCTTCCCGGCAGTTAAAGTTGATGGTAAATATTACTGGGATG
GTGGCATATCAAGTAATTCACCAGTCAATTATATCCTGAATCATAATAATCAAAAGCAAATGCTTTGTTTTATGATTCAT
TTGTTTGATTCTTTTGGGATGGTTCCCACCTCAATGGATGAGGTATTAAAACGTAAAAAAGACATTGAATTTTCCAGTCG
GTTTATAAAATTAATTAACCTTCACAAGGAAATTCATGATTTAAGAAACACAATTCACATTTTATCAAACCATATTTCTC
CTGAGGAAAAATCAAAACCTGAAATAAGGGAATGTATTAAAAAGGGACGTCCTTCCGCTATTTCGCTGGTTCGATTTTTA
TATGAGCACGATGAAACGGAATTGTCTTCAAAAGATTATGAATTCTCCAAAAAATCTATTCATGAACGCATTCAAAAAGG
TTATGATGATGGTAAAAATGCGATCAAAAAATCGCCTTGGAATCAATCAGTCCCAATGACTGAAGGTATAGCACTGTATG
ACATGTCTGCCAAAGACACTATGAAAAAATATCAAGACTAA

Upstream 100 bases:

>100_bases
TGTAGCACAAACCGCTTTATTTTTTGCATCATTTGAATCGAATGCGCTTACAGGACAATCATTGGTAGTCAGTCATGGTT
GGTTCATGGAGTAAACAACC

Downstream 100 bases:

>100_bases
TTGGACACTAGATACTATAGGATAGGGATATGTTAATTATAGTAGGTTATATTGTAATACTACTCTGTGTATTTGGTGGA
TTCAGCCTGACAGGCGGCCA

Product: transmembrane protein

Products: NA

Alternate protein names: Patatin-Like Phospholipase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Transmembrane Protein; Esterase; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Alpha/Beta Hydrolase; Patatin-Like Phospholipase Family; Phospholipase Patatin Family Protein; Transpatatin- Like Phospholipase Domain-Containing Protein; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Dehydrogenase/Reductase

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTRTKKSARQIEYRHIACSFQGGGALGAYQAGVLHALNEVGYHPHWYVGTSIGAINAAIAAGNSDKERIEKMYQFWESIA
TPSAVNESTLLDDKISRKIQHLIAAHSALLLGQPGFFVPRFPSPDFGWHNSPDLLSYYDTSPLHKSLEKFIDFDRLNNNK
LTRISVGAVEVSSGMMTYFDSYKQKIGPEHIMASGALPPGFPAVKVDGKYYWDGGISSNSPVNYILNHNNQKQMLCFMIH
LFDSFGMVPTSMDEVLKRKKDIEFSSRFIKLINLHKEIHDLRNTIHILSNHISPEEKSKPEIRECIKKGRPSAISLVRFL
YEHDETELSSKDYEFSKKSIHERIQKGYDDGKNAIKKSPWNQSVPMTEGIALYDMSAKDTMKKYQD

Sequences:

>Translated_386_residues
MTRTKKSARQIEYRHIACSFQGGGALGAYQAGVLHALNEVGYHPHWYVGTSIGAINAAIAAGNSDKERIEKMYQFWESIA
TPSAVNESTLLDDKISRKIQHLIAAHSALLLGQPGFFVPRFPSPDFGWHNSPDLLSYYDTSPLHKSLEKFIDFDRLNNNK
LTRISVGAVEVSSGMMTYFDSYKQKIGPEHIMASGALPPGFPAVKVDGKYYWDGGISSNSPVNYILNHNNQKQMLCFMIH
LFDSFGMVPTSMDEVLKRKKDIEFSSRFIKLINLHKEIHDLRNTIHILSNHISPEEKSKPEIRECIKKGRPSAISLVRFL
YEHDETELSSKDYEFSKKSIHERIQKGYDDGKNAIKKSPWNQSVPMTEGIALYDMSAKDTMKKYQD
>Mature_385_residues
TRTKKSARQIEYRHIACSFQGGGALGAYQAGVLHALNEVGYHPHWYVGTSIGAINAAIAAGNSDKERIEKMYQFWESIAT
PSAVNESTLLDDKISRKIQHLIAAHSALLLGQPGFFVPRFPSPDFGWHNSPDLLSYYDTSPLHKSLEKFIDFDRLNNNKL
TRISVGAVEVSSGMMTYFDSYKQKIGPEHIMASGALPPGFPAVKVDGKYYWDGGISSNSPVNYILNHNNQKQMLCFMIHL
FDSFGMVPTSMDEVLKRKKDIEFSSRFIKLINLHKEIHDLRNTIHILSNHISPEEKSKPEIRECIKKGRPSAISLVRFLY
EHDETELSSKDYEFSKKSIHERIQKGYDDGKNAIKKSPWNQSVPMTEGIALYDMSAKDTMKKYQD

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43741; Mature: 43610

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTKKSARQIEYRHIACSFQGGGALGAYQAGVLHALNEVGYHPHWYVGTSIGAINAAIA
CCCCHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHC
AGNSDKERIEKMYQFWESIATPSAVNESTLLDDKISRKIQHLIAAHSALLLGQPGFFVPR
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FPSPDFGWHNSPDLLSYYDTSPLHKSLEKFIDFDRLNNNKLTRISVGAVEVSSGMMTYFD
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCHHHHHH
SYKQKIGPEHIMASGALPPGFPAVKVDGKYYWDGGISSNSPVNYILNHNNQKQMLCFMIH
HHHHHCCHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHH
LFDSFGMVPTSMDEVLKRKKDIEFSSRFIKLINLHKEIHDLRNTIHILSNHISPEEKSKP
HHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EIRECIKKGRPSAISLVRFLYEHDETELSSKDYEFSKKSIHERIQKGYDDGKNAIKKSPW
HHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCC
NQSVPMTEGIALYDMSAKDTMKKYQD
CCCCCCCCCEEEEECCHHHHHHHHCC
>Mature Secondary Structure 
TRTKKSARQIEYRHIACSFQGGGALGAYQAGVLHALNEVGYHPHWYVGTSIGAINAAIA
CCCHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHC
AGNSDKERIEKMYQFWESIATPSAVNESTLLDDKISRKIQHLIAAHSALLLGQPGFFVPR
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FPSPDFGWHNSPDLLSYYDTSPLHKSLEKFIDFDRLNNNKLTRISVGAVEVSSGMMTYFD
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECEEECCCCHHHHHH
SYKQKIGPEHIMASGALPPGFPAVKVDGKYYWDGGISSNSPVNYILNHNNQKQMLCFMIH
HHHHHCCHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHH
LFDSFGMVPTSMDEVLKRKKDIEFSSRFIKLINLHKEIHDLRNTIHILSNHISPEEKSKP
HHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EIRECIKKGRPSAISLVRFLYEHDETELSSKDYEFSKKSIHERIQKGYDDGKNAIKKSPW
HHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCC
NQSVPMTEGIALYDMSAKDTMKKYQD
CCCCCCCCCEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA