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The map label for this gene is yfcB [C]

Identifier: 52842514

GI number: 52842514

Start: 2605902

End: 2606834

Strand: Reverse

Name: yfcB [C]

Synonym: lpg2304

Alternate gene names: 52842514

Gene position: 2606834-2605902 (Counterclockwise)

Preceding gene: 52842520

Following gene: 52842513

Centisome position: 76.72

GC content: 39.23

Gene sequence:

>933_bases
ATGGTTATGGTTGATACGCTTGTGAGTAGTTATTTTAGCAAGGAAACAGAAGAACTGGTTACTATTCTGGATTTTTTACG
GTTTAGTTTGTCTTGTGCAGAAAACGCGCAATTATTTTATGGCCACGGAACTGACAATGCTTGGGATGACATGAGATCCC
TGATATTGAGAAGCTTGTCTTTACCATATGATGTTGACCCTTTTTTGTTGAATGCACGTTTAACAACCAGTGAACGCAAA
CATCTTTGTAATCAATTGGATAAACGAATTAATCAAAGAGTACCCGTACCTTATTTAATTAAGGAAGCCTATTTTTGCGA
TTTGCCTTTTTATGTTGACGAACGAGTGCTTATACCCAGATCACCAATAGGAGAGTTAATCAATAATCAATTTTCCCCTT
GGATAGAAGCAGAACGAGTGCATCATGTTTTGGATTTATGTACCGGGAGTGGTTGTATAGCGATTGCCTGTTGTTATGCA
TTCCCTGAGGCTCAGGTGGATGCTGTGGATATTTCAAATCAAGCATTGGCTGTCGCTACTATCAATTGTGAACGTCATGA
TGTAGGCGATCAATTGGCACTGATTGAATCGGATTGTTTTACGGCACTGTCAGGTAAACAATATGATTTGATCGTGAGCA
ATCCTCCTTATGTGGGGAAGGAAGAGATGCAGACCCTGCCGGATGAATACCGCCATGAACCGGTTTTGGCATTGGAAACA
GGAAATAATGGCTTGGCTATTATTGAAAAAATTTTAAAGAATGCTCATGCTTATTTAAGTGAACATGGGATTTTGGTAGT
GGAAGTAGGTAATAGTGAAGAGGCTTTATGCGAGACTTATCCTATGGTTCCTTTTACCTGGCTTGAAATGAGCAACGGCG
GGCAAGGGGTGTTTTTATTAACAAAACAGCAATTAGAAGACTATTTTAAATAA

Upstream 100 bases:

>100_bases
GGTGAAAATCGAGCCATGCGAAGGGGCGTCTTAAATCGCACCCCTTAACAAAGAATACAGGACATAGATTTTAATTTAGT
GTACAATTTGTACTTTTTCT

Downstream 100 bases:

>100_bases
GCGAGTAAGGCATGTCAGGGAATACCTTTGGAGCGTTATTTACTGTAACAACCTTTGGTGAAAGCCACGGTCCTGCTATC
GGATGTGTAGTCGATGGTTG

Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MVMVDTLVSSYFSKETEELVTILDFLRFSLSCAENAQLFYGHGTDNAWDDMRSLILRSLSLPYDVDPFLLNARLTTSERK
HLCNQLDKRINQRVPVPYLIKEAYFCDLPFYVDERVLIPRSPIGELINNQFSPWIEAERVHHVLDLCTGSGCIAIACCYA
FPEAQVDAVDISNQALAVATINCERHDVGDQLALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRHEPVLALET
GNNGLAIIEKILKNAHAYLSEHGILVVEVGNSEEALCETYPMVPFTWLEMSNGGQGVFLLTKQQLEDYFK

Sequences:

>Translated_310_residues
MVMVDTLVSSYFSKETEELVTILDFLRFSLSCAENAQLFYGHGTDNAWDDMRSLILRSLSLPYDVDPFLLNARLTTSERK
HLCNQLDKRINQRVPVPYLIKEAYFCDLPFYVDERVLIPRSPIGELINNQFSPWIEAERVHHVLDLCTGSGCIAIACCYA
FPEAQVDAVDISNQALAVATINCERHDVGDQLALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRHEPVLALET
GNNGLAIIEKILKNAHAYLSEHGILVVEVGNSEEALCETYPMVPFTWLEMSNGGQGVFLLTKQQLEDYFK
>Mature_310_residues
MVMVDTLVSSYFSKETEELVTILDFLRFSLSCAENAQLFYGHGTDNAWDDMRSLILRSLSLPYDVDPFLLNARLTTSERK
HLCNQLDKRINQRVPVPYLIKEAYFCDLPFYVDERVLIPRSPIGELINNQFSPWIEAERVHHVLDLCTGSGCIAIACCYA
FPEAQVDAVDISNQALAVATINCERHDVGDQLALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRHEPVLALET
GNNGLAIIEKILKNAHAYLSEHGILVVEVGNSEEALCETYPMVPFTWLEMSNGGQGVFLLTKQQLEDYFK

Specific function: Unknown

COG id: COG2890

COG function: function code J; Methylase of polypeptide chain release factors

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705409, Length=219, Percent_Identity=31.5068493150685, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI87082085, Length=295, Percent_Identity=55.2542372881356, Blast_Score=333, Evalue=1e-92,
Organism=Escherichia coli, GI1787463, Length=191, Percent_Identity=32.4607329842932, Blast_Score=100, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24582226, Length=194, Percent_Identity=29.3814432989691, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR004556
- InterPro:   IPR017127
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 34968; Mature: 34968

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMVDTLVSSYFSKETEELVTILDFLRFSLSCAENAQLFYGHGTDNAWDDMRSLILRSLS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC
LPYDVDPFLLNARLTTSERKHLCNQLDKRINQRVPVPYLIKEAYFCDLPFYVDERVLIPR
CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCEECCEEECCC
SPIGELINNQFSPWIEAERVHHVLDLCTGSGCIAIACCYAFPEAQVDAVDISNQALAVAT
CHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEHHCCCCCEEEEECCCCEEEEEE
INCERHDVGDQLALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRHEPVLALET
EECCCCCCCCCEEEEHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCHHHCCCCEEEEEE
GNNGLAIIEKILKNAHAYLSEHGILVVEVGNSEEALCETYPMVPFTWLEMSNGGQGVFLL
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCEEEEE
TKQQLEDYFK
EHHHHHHHCC
>Mature Secondary Structure
MVMVDTLVSSYFSKETEELVTILDFLRFSLSCAENAQLFYGHGTDNAWDDMRSLILRSLS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC
LPYDVDPFLLNARLTTSERKHLCNQLDKRINQRVPVPYLIKEAYFCDLPFYVDERVLIPR
CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCEECCEEECCC
SPIGELINNQFSPWIEAERVHHVLDLCTGSGCIAIACCYAFPEAQVDAVDISNQALAVAT
CHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEHHCCCCCEEEEECCCCEEEEEE
INCERHDVGDQLALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRHEPVLALET
EECCCCCCCCCEEEEHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCHHHCCCCEEEEEE
GNNGLAIIEKILKNAHAYLSEHGILVVEVGNSEEALCETYPMVPFTWLEMSNGGQGVFLL
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCEEEEE
TKQQLEDYFK
EHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]