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The map label for this gene is 52842482

Identifier: 52842482

GI number: 52842482

Start: 2570779

End: 2573355

Strand: Direct

Name: 52842482

Synonym: lpg2269

Alternate gene names: NA

Gene position: 2570779-2573355 (Clockwise)

Preceding gene: 52842481

Following gene: 52842483

Centisome position: 75.66

GC content: 38.65

Gene sequence:

>2577_bases
ATGCATTGGCAAAAAGTAAATCAGAAGGACATGCCCATAAAGTTCACCGATGAACTTAAGTCAGATGAGCTTTATAATCT
ATTGTCTCAAGGAGCAGTCGTTATTACTCCTAACAATAGATTAAGCGGAACCATCCTTCAGAATTACTTCACTTATTGGT
CCAGAAAAACAATTACCAAGCCAATATGCTTGCCTTTTAATACATTTCTGGTTAACTCTTTTGAACAACTCAAATTCCAA
AAACCAGACCTGGAACATCCCATACTTTTAAATTCGGCACAATGCCAACATTTATGGCGAAAACTAATTGAATCTCATCC
TTCTATCATTTACACGGAAGGCTTGCTTAAAACAATAATGCAAGCATGGGAATACTGTGAGCAATGGCAACTTACACCTG
AAGCGCCTGCTTTTCACTACACGCCGCAAACACAACAATTTCAACAATGGTGGCAATCTTTTAATAAAATACTTAAAGAA
ATTTCTGCCATCCATCAGCATCAATTAATTCCCTACTTGCTTGATTCCAATTATCAAGGGCTCTTAAAAACCGTTGTCTG
GATGTGCTTTGATGACTTTAATCCACAACAATTATCCCTGCAAAATTATTTGAACGCGCAGGGGGTAATTCAATATGGTT
ATGATTTAAAAGAAAACCAGGAGACTCCGGAGGTTTTCTCAGCTAAAGACAAAAAAACAGAATACCAGGAATTGATGACC
TGGTTGGAGAAGAAAATTCAACAAGGAAAAAAGCAAATCGGGGTTGTTGTGCCTAATCTTGAACAAGAATCATCGGTTTT
GCAACGAATTTTACGCGACTGCTTTGAACCCAATTTATTTAATATTTCTTTAGGCAAACCATTAAGCGCATTTCACTTGA
TCTCTCATGCCCTCATTTGGCTGAGTCTTGATCACAATCTCTTAAATAATCATCAAGCAGCTTTGCTGCTCCAATCACCC
TACCTTGGCAAGGCAAAAGATGAGTTTCTTCAAAGATCAGATTACTTACAGGAAAGCAAGTTGTTGCAAGACCAATCTTT
CCCCACAAAATTATTTATTGAGGACATTGCCCACCACACGCCTAAACTGGCTGAATTGTTAAAAAACATGAATTTTTATC
CGGAAAAAACTACCCTGGATGAGTGGATTGAGTTATTTCAGGAGAGGTTAAATGGCATTGGTTTTCCTGGAGATTATGTT
TTGAACTCAGAGGATTATCAATGCTTTAATCGCTTTACAATGATTTTTGACGAATTCAGACAATTAAGTCTGATAAGCAG
CCATTTGACTAAAAAAGAGGCATTTGAAGCGTTAAAACAACTCATAGACAACACTATTTTTCAACCACAAAAAAGCAATT
CACCAATTCAAATTTTGGGATTGTTAGAAGCATCAGGTTGCGAGTTTGACAGCCTTTGGGTAATGGGATTGACTGATCGA
TGTTTACCTCAACAAACACGTTTATCGCCCTTTATCCCATTTGAATTACAGCGTGAACTGGGTATGCCTCACAGTATCCC
GGCAAGAGAGCTCCAATATGCCAAGCAAATTTTGCAAAGACTGCAACGAGGTAGCGTGGAAACCGTTTTTAGTTATCCAC
AATTTGACGATGACACGCCTAATTTACCCTGCTCATTGATTACTCATTATCCTGCCTACCTCAGCCGGCCTGCTGACAAT
AAAACAAATGTTCAAAGTTGTTTGGTTCCTCTTGAAGAAAACTATGAAGTGCCTGTAAAACCTGATGAATCCATTTCTGG
CGGAACCAGCTTACTAAGCAATCAGGCCAAATGCCCTTTTAAAGCATTAGCACAACACCGACTTAAGGCAAACCCTGTTC
TAAAAACTACAGATGGAATGGATGACAAGGAAAAAGGTCAATTAATCCATAAAATCCTGGAGTTGCTCTGGCAAAGATTG
GAAAATCAGGAACACTTAATTAAATTAAAACCCGCTGAACTTGAACGATTCATTGATCAAGCAATTCAAGGCGCTTTAAA
TCCGATTAGGCAACAACACTCCCAGACTTTTCCTGACTTGGTTGCCAATGTTGAATACATGAGATTAAAACGAATTATCT
TGTCTTATCTGGAATGGGAAAAGCAACGCCCTCCTTTTAAAATCACAGGCCTGGAAGAAAATCATTCGATCAATTTGGCT
GGGCTCGATTTTAAAGTAAGAGTGGACAGACTGGATGAAGTAGGTAACAAGCAATGGGTCATTGATTACAAAAGCACTCT
CCCTGGCGGCAAACCATGGAATGAAGAAAGACCAATGGAGCCTCAATTGCTACTTTATGCGTTGCTTAACGAACAAATCA
ATACTTTGTTATTGATTCAATTAAAAACCGGAAAAATCAAGCTCAGCGGTTTTAGCGAAGAAAAATGGGAAACCAAAGAG
ATTAATACTTTGAAAGAGGATGAAAATTGGGAAGACTATCGACAACGCTGGCTAGAACAATTAACTCATTTAGCTGAAGA
AATTAAGTCTGGCTATTGTCCACCACGCCCTCAAAATCTGACCATTTGCCAACGCTGTGATTTTCAGAACTTATGCCGCT
TCCAGGCTAAACAATAA

Upstream 100 bases:

>100_bases
TTGCTGGCTATTGCATCCGGGCTTGCCGCTATGTATTTAAGAGGACAATTAGTATACGATATCCTGCATACCCAAACTCG
ACGTCAACAAAAACATAAGC

Downstream 100 bases:

>100_bases
ACCAGTTTTAATTTATCGGGACTACTTATGCATCATTTAATTCTTGGTTATGGCTATTGCGGTTATTACCTGGCCCAAGA
GCTTCTTGGGCATCATCAAC

Product: endonuclease

Products: NA

Alternate protein names: DNA Repair Protein; ATP-Dependent Nuclease Subunit B

Number of amino acids: Translated: 858; Mature: 858

Protein sequence:

>858_residues
MHWQKVNQKDMPIKFTDELKSDELYNLLSQGAVVITPNNRLSGTILQNYFTYWSRKTITKPICLPFNTFLVNSFEQLKFQ
KPDLEHPILLNSAQCQHLWRKLIESHPSIIYTEGLLKTIMQAWEYCEQWQLTPEAPAFHYTPQTQQFQQWWQSFNKILKE
ISAIHQHQLIPYLLDSNYQGLLKTVVWMCFDDFNPQQLSLQNYLNAQGVIQYGYDLKENQETPEVFSAKDKKTEYQELMT
WLEKKIQQGKKQIGVVVPNLEQESSVLQRILRDCFEPNLFNISLGKPLSAFHLISHALIWLSLDHNLLNNHQAALLLQSP
YLGKAKDEFLQRSDYLQESKLLQDQSFPTKLFIEDIAHHTPKLAELLKNMNFYPEKTTLDEWIELFQERLNGIGFPGDYV
LNSEDYQCFNRFTMIFDEFRQLSLISSHLTKKEAFEALKQLIDNTIFQPQKSNSPIQILGLLEASGCEFDSLWVMGLTDR
CLPQQTRLSPFIPFELQRELGMPHSIPARELQYAKQILQRLQRGSVETVFSYPQFDDDTPNLPCSLITHYPAYLSRPADN
KTNVQSCLVPLEENYEVPVKPDESISGGTSLLSNQAKCPFKALAQHRLKANPVLKTTDGMDDKEKGQLIHKILELLWQRL
ENQEHLIKLKPAELERFIDQAIQGALNPIRQQHSQTFPDLVANVEYMRLKRIILSYLEWEKQRPPFKITGLEENHSINLA
GLDFKVRVDRLDEVGNKQWVIDYKSTLPGGKPWNEERPMEPQLLLYALLNEQINTLLLIQLKTGKIKLSGFSEEKWETKE
INTLKEDENWEDYRQRWLEQLTHLAEEIKSGYCPPRPQNLTICQRCDFQNLCRFQAKQ

Sequences:

>Translated_858_residues
MHWQKVNQKDMPIKFTDELKSDELYNLLSQGAVVITPNNRLSGTILQNYFTYWSRKTITKPICLPFNTFLVNSFEQLKFQ
KPDLEHPILLNSAQCQHLWRKLIESHPSIIYTEGLLKTIMQAWEYCEQWQLTPEAPAFHYTPQTQQFQQWWQSFNKILKE
ISAIHQHQLIPYLLDSNYQGLLKTVVWMCFDDFNPQQLSLQNYLNAQGVIQYGYDLKENQETPEVFSAKDKKTEYQELMT
WLEKKIQQGKKQIGVVVPNLEQESSVLQRILRDCFEPNLFNISLGKPLSAFHLISHALIWLSLDHNLLNNHQAALLLQSP
YLGKAKDEFLQRSDYLQESKLLQDQSFPTKLFIEDIAHHTPKLAELLKNMNFYPEKTTLDEWIELFQERLNGIGFPGDYV
LNSEDYQCFNRFTMIFDEFRQLSLISSHLTKKEAFEALKQLIDNTIFQPQKSNSPIQILGLLEASGCEFDSLWVMGLTDR
CLPQQTRLSPFIPFELQRELGMPHSIPARELQYAKQILQRLQRGSVETVFSYPQFDDDTPNLPCSLITHYPAYLSRPADN
KTNVQSCLVPLEENYEVPVKPDESISGGTSLLSNQAKCPFKALAQHRLKANPVLKTTDGMDDKEKGQLIHKILELLWQRL
ENQEHLIKLKPAELERFIDQAIQGALNPIRQQHSQTFPDLVANVEYMRLKRIILSYLEWEKQRPPFKITGLEENHSINLA
GLDFKVRVDRLDEVGNKQWVIDYKSTLPGGKPWNEERPMEPQLLLYALLNEQINTLLLIQLKTGKIKLSGFSEEKWETKE
INTLKEDENWEDYRQRWLEQLTHLAEEIKSGYCPPRPQNLTICQRCDFQNLCRFQAKQ
>Mature_858_residues
MHWQKVNQKDMPIKFTDELKSDELYNLLSQGAVVITPNNRLSGTILQNYFTYWSRKTITKPICLPFNTFLVNSFEQLKFQ
KPDLEHPILLNSAQCQHLWRKLIESHPSIIYTEGLLKTIMQAWEYCEQWQLTPEAPAFHYTPQTQQFQQWWQSFNKILKE
ISAIHQHQLIPYLLDSNYQGLLKTVVWMCFDDFNPQQLSLQNYLNAQGVIQYGYDLKENQETPEVFSAKDKKTEYQELMT
WLEKKIQQGKKQIGVVVPNLEQESSVLQRILRDCFEPNLFNISLGKPLSAFHLISHALIWLSLDHNLLNNHQAALLLQSP
YLGKAKDEFLQRSDYLQESKLLQDQSFPTKLFIEDIAHHTPKLAELLKNMNFYPEKTTLDEWIELFQERLNGIGFPGDYV
LNSEDYQCFNRFTMIFDEFRQLSLISSHLTKKEAFEALKQLIDNTIFQPQKSNSPIQILGLLEASGCEFDSLWVMGLTDR
CLPQQTRLSPFIPFELQRELGMPHSIPARELQYAKQILQRLQRGSVETVFSYPQFDDDTPNLPCSLITHYPAYLSRPADN
KTNVQSCLVPLEENYEVPVKPDESISGGTSLLSNQAKCPFKALAQHRLKANPVLKTTDGMDDKEKGQLIHKILELLWQRL
ENQEHLIKLKPAELERFIDQAIQGALNPIRQQHSQTFPDLVANVEYMRLKRIILSYLEWEKQRPPFKITGLEENHSINLA
GLDFKVRVDRLDEVGNKQWVIDYKSTLPGGKPWNEERPMEPQLLLYALLNEQINTLLLIQLKTGKIKLSGFSEEKWETKE
INTLKEDENWEDYRQRWLEQLTHLAEEIKSGYCPPRPQNLTICQRCDFQNLCRFQAKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100290; Mature: 100290

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWQKVNQKDMPIKFTDELKSDELYNLLSQGAVVITPNNRLSGTILQNYFTYWSRKTITK
CCCCCCCCCCCCEEEHHHCCHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC
PICLPFNTFLVNSFEQLKFQKPDLEHPILLNSAQCQHLWRKLIESHPSIIYTEGLLKTIM
CCCCCHHHHHHCCHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHH
QAWEYCEQWQLTPEAPAFHYTPQTQQFQQWWQSFNKILKEISAIHQHQLIPYLLDSNYQG
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH
LLKTVVWMCFDDFNPQQLSLQNYLNAQGVIQYGYDLKENQETPEVFSAKDKKTEYQELMT
HHHHHHHHHHCCCCCHHCCHHHHCCCCCEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHH
WLEKKIQQGKKQIGVVVPNLEQESSVLQRILRDCFEPNLFNISLGKPLSAFHLISHALIW
HHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
LSLDHNLLNNHQAALLLQSPYLGKAKDEFLQRSDYLQESKLLQDQSFPTKLFIEDIAHHT
HEECHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PKLAELLKNMNFYPEKTTLDEWIELFQERLNGIGFPGDYVLNSEDYQCFNRFTMIFDEFR
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
QLSLISSHLTKKEAFEALKQLIDNTIFQPQKSNSPIQILGLLEASGCEFDSLWVMGLTDR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCC
CLPQQTRLSPFIPFELQRELGMPHSIPARELQYAKQILQRLQRGSVETVFSYPQFDDDTP
CCCCHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
NLPCSLITHYPAYLSRPADNKTNVQSCLVPLEENYEVPVKPDESISGGTSLLSNQAKCPF
CCCHHHHHHCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCH
KALAQHRLKANPVLKTTDGMDDKEKGQLIHKILELLWQRLENQEHLIKLKPAELERFIDQ
HHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH
AIQGALNPIRQQHSQTFPDLVANVEYMRLKRIILSYLEWEKQRPPFKITGLEENHSINLA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEE
GLDFKVRVDRLDEVGNKQWVIDYKSTLPGGKPWNEERPMEPQLLLYALLNEQINTLLLIQ
CCEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
LKTGKIKLSGFSEEKWETKEINTLKEDENWEDYRQRWLEQLTHLAEEIKSGYCPPRPQNL
EECCEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TICQRCDFQNLCRFQAKQ
HHHHHCCHHHHHHHCCCC
>Mature Secondary Structure
MHWQKVNQKDMPIKFTDELKSDELYNLLSQGAVVITPNNRLSGTILQNYFTYWSRKTITK
CCCCCCCCCCCCEEEHHHCCHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC
PICLPFNTFLVNSFEQLKFQKPDLEHPILLNSAQCQHLWRKLIESHPSIIYTEGLLKTIM
CCCCCHHHHHHCCHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHH
QAWEYCEQWQLTPEAPAFHYTPQTQQFQQWWQSFNKILKEISAIHQHQLIPYLLDSNYQG
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH
LLKTVVWMCFDDFNPQQLSLQNYLNAQGVIQYGYDLKENQETPEVFSAKDKKTEYQELMT
HHHHHHHHHHCCCCCHHCCHHHHCCCCCEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHH
WLEKKIQQGKKQIGVVVPNLEQESSVLQRILRDCFEPNLFNISLGKPLSAFHLISHALIW
HHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
LSLDHNLLNNHQAALLLQSPYLGKAKDEFLQRSDYLQESKLLQDQSFPTKLFIEDIAHHT
HEECHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PKLAELLKNMNFYPEKTTLDEWIELFQERLNGIGFPGDYVLNSEDYQCFNRFTMIFDEFR
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
QLSLISSHLTKKEAFEALKQLIDNTIFQPQKSNSPIQILGLLEASGCEFDSLWVMGLTDR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCC
CLPQQTRLSPFIPFELQRELGMPHSIPARELQYAKQILQRLQRGSVETVFSYPQFDDDTP
CCCCHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
NLPCSLITHYPAYLSRPADNKTNVQSCLVPLEENYEVPVKPDESISGGTSLLSNQAKCPF
CCCHHHHHHCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCH
KALAQHRLKANPVLKTTDGMDDKEKGQLIHKILELLWQRLENQEHLIKLKPAELERFIDQ
HHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH
AIQGALNPIRQQHSQTFPDLVANVEYMRLKRIILSYLEWEKQRPPFKITGLEENHSINLA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEE
GLDFKVRVDRLDEVGNKQWVIDYKSTLPGGKPWNEERPMEPQLLLYALLNEQINTLLLIQ
CCEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
LKTGKIKLSGFSEEKWETKEINTLKEDENWEDYRQRWLEQLTHLAEEIKSGYCPPRPQNL
EECCEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TICQRCDFQNLCRFQAKQ
HHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA