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The map label for this gene is phbC

Identifier: 52842473

GI number: 52842473

Start: 2561792

End: 2563642

Strand: Direct

Name: phbC

Synonym: lpg2260

Alternate gene names: 52842473

Gene position: 2561792-2563642 (Clockwise)

Preceding gene: 52842471

Following gene: 52842474

Centisome position: 75.4

GC content: 41.33

Gene sequence:

>1851_bases
TTGTCATTTATGGAATGCTGCTATACTATTTTTTATAAATCAAACACCTACAGGATGCAAGGTATGAAAAAAACAAACGA
GAAACCTATCAATAAAACAAATGAAATGCCTGCATCCTCAAAAAAAGAAATCGTAAGCCCACTAGAACAAACACCTGCTT
CCGAACAATCTGACCCCATTTTCAGATTCATTGATAAGCTATATCAAGCTAACCTGGGAAAGTTAACTGCTGGTATAAGT
CCTGCCGCATTAGGTACAGCCTATTACTCCTGGTTTGCTCAACTGCTGCAATCACCTGGTTCAATGTTACGACTGGCCTC
TTATCCTCTGTTGCATGCTAACGATTATCTTTCCAACCTTTTCAAGTATGACAAGCCCAGAGATGGCAAAGATGTACGCT
TTCATACAGATAACTGGAGTTACTATCCCTGGCGGCTTTGGGCTGAACAATTTCTCCAATTCGAAGATTGGTGTTTACAA
GCCTCGAGCAAAGTTCCAGGGATACCACTTCATGTCAAAAGGACAGTAACCTTTTCCACCAGACAGATTCTTGATGCCTT
GTCACCATCCAATTTTGTTTTGACCAATCCTGATTTGCTTCAGGAAACAATTCGCTCGAACGGACAAAATTTAATTCGTG
GAACAGAACTTGCTTTTCAGGATTTTGTAGAAAAGATAACCGGTTCTCCTCCTGCGGGAGTCGAGAATTTTATCCCGGGG
AAACAAGTCGCTATAACAAAGGGGAAAGTCGTTTATAGCAATCATTTAATTGAATTAATCCAGTACACACCCCAAACAGA
AAAGGTATACAAAGAACCGATCTTGATTTTACCCGCCTGGATCATGAAATATTATATCCTGGATTTGCTGCCGGAAAACT
CTTTAGTAAACTGGCTGGTTAGACAGGGACATACTGTATTTATTGTATCCTGGCGCAATCCAACGAAAGAAGATAGAAAT
CTTGGACTGGATGATTATTATAAGTTGGGCGCTATGGATGCCATAAATGCAGTGAGCAATGCCATTCCACATACCAAAAT
CCATTTAATGGGTTATTGTCTTGGGGGCACCCTGGCTCTGTTAACCGCAGCAGCGATGGCTCATGATCACGATAACCGTC
TTAAAACATTATCCCTGCTCGCAGCTCAAGGCGATTTTATTGATGCCGGCGAATTACTGCTCTTTATAACCAAAAGTGAA
GTATCCTTTTTAAAAAGTATGATGTGGGAGCAAGGGTATCTGGACACAAAACAAATGTCTGGAACTTTTCAAATGCTCCG
TTCGTACGATTTGATTTGGTCTAAAATGGTTCAGGATTACATGCACGGGACTCAAAGAGGGATGATCCCTTTACTGGCAT
GGAACGCCGACGCAACTCGTATGCCATACAAAATGCATAGTGAATACCTGGAAAAACTGTTCCTTAATAATGATTTTGCC
GAAGGCCGATTTATTCTGGACGGAAAGCCGGTCGTAGGTGAAAATATTCGTATACCTGCTTTTGTCGTAAGCACAGAAAA
AGATCACGTAGCTCCGTGGAAATCCGTATACAAAACCCATTTGTTAATCAATTCCGATATTACTTTTGTCCTGACTAATG
GAGGTCATAACGCTGGAATAGTCAGTGAACCCGGACATGAAGGACGTTATTACCGCATTCGGGAAAGAAAAATGGATTCA
ACCTATCTTGACCCAACTACCTGGGTAAAAAGGGCTGAATTAAGAGAGGGATCCTGGTGGATTGCCTGGCACGATTGGTT
AGTTAATCACTCATCCCAAAAACAGGTGTCTGCACCCAAACTGGACAAAAAACTACCAAACGCTCCTGGGAAATATGTAT
TACAAAAATAA

Upstream 100 bases:

>100_bases
AATAGCACAACTCCCCTTATTTCTATAGTCAAGCCACTGCCTATAAATCATCGTTTAGCAAGAGAAACTTAAGTCTTTTC
AAACAATAACTCAGATTAAA

Downstream 100 bases:

>100_bases
AGGAATTAGTAATGAATAATGAATTTCTTGAAAATGTCACCTATGAAGAGCTGACTTTAGGACGCAGAGCCAGCTTAAAT
CGTACATTAACTCAGGATGA

Product: PHA synthase

Products: NA

Alternate protein names: PHA polymerase; PHA synthase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MSFMECCYTIFYKSNTYRMQGMKKTNEKPINKTNEMPASSKKEIVSPLEQTPASEQSDPIFRFIDKLYQANLGKLTAGIS
PAALGTAYYSWFAQLLQSPGSMLRLASYPLLHANDYLSNLFKYDKPRDGKDVRFHTDNWSYYPWRLWAEQFLQFEDWCLQ
ASSKVPGIPLHVKRTVTFSTRQILDALSPSNFVLTNPDLLQETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPG
KQVAITKGKVVYSNHLIELIQYTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLVRQGHTVFIVSWRNPTKEDRN
LGLDDYYKLGAMDAINAVSNAIPHTKIHLMGYCLGGTLALLTAAAMAHDHDNRLKTLSLLAAQGDFIDAGELLLFITKSE
VSFLKSMMWEQGYLDTKQMSGTFQMLRSYDLIWSKMVQDYMHGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFA
EGRFILDGKPVVGENIRIPAFVVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGIVSEPGHEGRYYRIRERKMDS
TYLDPTTWVKRAELREGSWWIAWHDWLVNHSSQKQVSAPKLDKKLPNAPGKYVLQK

Sequences:

>Translated_616_residues
MSFMECCYTIFYKSNTYRMQGMKKTNEKPINKTNEMPASSKKEIVSPLEQTPASEQSDPIFRFIDKLYQANLGKLTAGIS
PAALGTAYYSWFAQLLQSPGSMLRLASYPLLHANDYLSNLFKYDKPRDGKDVRFHTDNWSYYPWRLWAEQFLQFEDWCLQ
ASSKVPGIPLHVKRTVTFSTRQILDALSPSNFVLTNPDLLQETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPG
KQVAITKGKVVYSNHLIELIQYTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLVRQGHTVFIVSWRNPTKEDRN
LGLDDYYKLGAMDAINAVSNAIPHTKIHLMGYCLGGTLALLTAAAMAHDHDNRLKTLSLLAAQGDFIDAGELLLFITKSE
VSFLKSMMWEQGYLDTKQMSGTFQMLRSYDLIWSKMVQDYMHGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFA
EGRFILDGKPVVGENIRIPAFVVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGIVSEPGHEGRYYRIRERKMDS
TYLDPTTWVKRAELREGSWWIAWHDWLVNHSSQKQVSAPKLDKKLPNAPGKYVLQK
>Mature_615_residues
SFMECCYTIFYKSNTYRMQGMKKTNEKPINKTNEMPASSKKEIVSPLEQTPASEQSDPIFRFIDKLYQANLGKLTAGISP
AALGTAYYSWFAQLLQSPGSMLRLASYPLLHANDYLSNLFKYDKPRDGKDVRFHTDNWSYYPWRLWAEQFLQFEDWCLQA
SSKVPGIPLHVKRTVTFSTRQILDALSPSNFVLTNPDLLQETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPGK
QVAITKGKVVYSNHLIELIQYTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLVRQGHTVFIVSWRNPTKEDRNL
GLDDYYKLGAMDAINAVSNAIPHTKIHLMGYCLGGTLALLTAAAMAHDHDNRLKTLSLLAAQGDFIDAGELLLFITKSEV
SFLKSMMWEQGYLDTKQMSGTFQMLRSYDLIWSKMVQDYMHGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFAE
GRFILDGKPVVGENIRIPAFVVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGIVSEPGHEGRYYRIRERKMDST
YLDPTTWVKRAELREGSWWIAWHDWLVNHSSQKQVSAPKLDKKLPNAPGKYVLQK

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 70501; Mature: 70370

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFMECCYTIFYKSNTYRMQGMKKTNEKPINKTNEMPASSKKEIVSPLEQTPASEQSDPI
CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH
FRFIDKLYQANLGKLTAGISPAALGTAYYSWFAQLLQSPGSMLRLASYPLLHANDYLSNL
HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHH
FKYDKPRDGKDVRFHTDNWSYYPWRLWAEQFLQFEDWCLQASSKVPGIPLHVKRTVTFST
HHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHH
RQILDALSPSNFVLTNPDLLQETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPG
HHHHHHCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
KQVAITKGKVVYSNHLIELIQYTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLV
CEEEEECCCEEEHHHHHHHHHCCCCHHHHHHCCEEEHHHHHHHHHHHHHCCCCHHHHHHH
RQGHTVFIVSWRNPTKEDRNLGLDDYYKLGAMDAINAVSNAIPHTKIHLMGYCLGGTLAL
HCCCEEEEEECCCCCCHHHCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
LTAAAMAHDHDNRLKTLSLLAAQGDFIDAGELLLFITKSEVSFLKSMMWEQGYLDTKQMS
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHH
GTFQMLRSYDLIWSKMVQDYMHGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFA
HHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC
EGRFILDGKPVVGENIRIPAFVVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGI
CCEEEECCCCCCCCCEECCEEEEECCCCCCCHHHHHHHHHEEEECCEEEEEECCCCCCCC
VSEPGHEGRYYRIRERKMDSTYLDPTTWVKRAELREGSWWIAWHDWLVNHSSQKQVSAPK
CCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCC
LDKKLPNAPGKYVLQK
HHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SFMECCYTIFYKSNTYRMQGMKKTNEKPINKTNEMPASSKKEIVSPLEQTPASEQSDPI
CHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHH
FRFIDKLYQANLGKLTAGISPAALGTAYYSWFAQLLQSPGSMLRLASYPLLHANDYLSNL
HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHH
FKYDKPRDGKDVRFHTDNWSYYPWRLWAEQFLQFEDWCLQASSKVPGIPLHVKRTVTFST
HHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHH
RQILDALSPSNFVLTNPDLLQETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPG
HHHHHHCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
KQVAITKGKVVYSNHLIELIQYTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLV
CEEEEECCCEEEHHHHHHHHHCCCCHHHHHHCCEEEHHHHHHHHHHHHHCCCCHHHHHHH
RQGHTVFIVSWRNPTKEDRNLGLDDYYKLGAMDAINAVSNAIPHTKIHLMGYCLGGTLAL
HCCCEEEEEECCCCCCHHHCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
LTAAAMAHDHDNRLKTLSLLAAQGDFIDAGELLLFITKSEVSFLKSMMWEQGYLDTKQMS
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHH
GTFQMLRSYDLIWSKMVQDYMHGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFA
HHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC
EGRFILDGKPVVGENIRIPAFVVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGI
CCEEEECCCCCCCCCEECCEEEEECCCCCCCHHHHHHHHHEEEECCEEEEEECCCCCCCC
VSEPGHEGRYYRIRERKMDSTYLDPTTWVKRAELREGSWWIAWHDWLVNHSSQKQVSAPK
CCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCC
LDKKLPNAPGKYVLQK
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763712 [H]