Click here to switch to the map view.

The map label for this gene is 52842455

Identifier: 52842455

GI number: 52842455

Start: 2540094

End: 2541419

Strand: Direct

Name: 52842455

Synonym: lpg2242

Alternate gene names: NA

Gene position: 2540094-2541419 (Clockwise)

Preceding gene: 52842454

Following gene: 52842456

Centisome position: 74.76

GC content: 43.44

Gene sequence:

>1326_bases
ATGCCAAGCGTGCAGCAGGATATTACTCACCCGAAGGAATTATTGATATCAACGAATTGGCTAAACCGAAAGGACGTGCC
CTTCATGAATAATCAAGAGCAGCAAATACAAAATGTTTTGAATACGCTTCGTGATCCTGACACCATAAGAACCCGGTCGC
ATCGTATTTTAAACTTGGCAAAACAAAATCGGCTGGAACACTTTTCCCTGAACCCGGAACGAATGACAACAACGGCATCG
TATATCGTAGACATTATCACCAGCCGTTATCCTGAGCTTGATATTCCATATCACAGCCGCTGGCGTCATTTTGAAATGGA
TGGCCTTCCCCGAATTCATAATTTACGCAAACAACTGGATCCAATTTCCCCCTCAGAATGGGGAAAAATACTCTACGAAC
TGGTCATCATCAGTGTTTTCCTCGATGCAGGGGCAGGCCCCCTATGGCGCTATAAAGAAGCTCTCACTGAAAAGGAGTAC
AGTCGCTCTGAAGGATTAGCCCTGGCCAGTTTATACCTCTATGAAAGTGGGGCATTTAGCGCTGACCCAACTAACCCGTT
TCGCGTGGATGCCGAGCGTCTGCTTGACTTTAAAGAAACGGATCTCATAAAAGGTTTTCAGGTTAGCTCTACCAATCTGC
TTGAAGGAATACCCGGTCGAGTATCCTTGCTTAATCGCCTTGGAGAAATCATTCATCGCAAGGAACACTGTTTTAATCGC
CGAAAACGTCTTGGTGAATTTTATACTTATGTGGAATCCTTGCAAGACAACAAAATACTGCCTACTACCAAATTATTCGA
GGCCGTGTTAGAAACATTCAATGACATATGGCCTGTTCGATTGATCTATCATGGAGTATCTTTAGGCGATGTCTGGATCC
ACAGCGCATTGAAAACCAATGAGGCCGGATCTGAATACATACCCTTTCACAAATTATCACAATGGCTCACTTATTCTTTA
GTAGAACCACTGGAACAAACAGGTATTGATATTGCTGATTTGGATGTATTGACCGGATTGCCTGAGTATCGAAATGGTGG
TTTACTAATCGATACCGAACTATTAAAAGTAAGAAATAATAAAATTCTGGAGCAACCTCAAGACCCTGGCTCAGAGCCCA
TAGTAGAATGGCGTGCTTTAACCGTAGCCTTGCTGGATGAGCTAGCGCTATTAATCAGGCAACAGCTCAACATGAATGCA
GAATCTCTTCCCTTAGCCAAAATACTGCAAGGAGGCACTTGGGAGGCGGGACGACAGATTGCACAAAAGAAACGAATTAA
TGGAACACCCCCAATAGAAATTATCAGTGATGGCACGATATTTTAA

Upstream 100 bases:

>100_bases
AATATGAAATACGATGCCTTGCTCAAATCTGGAATCAATGTTATTGAACGGGTAAAAATACCGGATGAGTTGATTCCTCC
AGATGCCCGGGTAGAAATAG

Downstream 100 bases:

>100_bases
TAAGGAATAATAATGGACTTCAATCAAGTTAAGGTTATAAATCATCCTCTCATTCAGCACAAACTCACCATAATGAGAAA
AAAAGAAACCAGCACAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MPSVQQDITHPKELLISTNWLNRKDVPFMNNQEQQIQNVLNTLRDPDTIRTRSHRILNLAKQNRLEHFSLNPERMTTTAS
YIVDIITSRYPELDIPYHSRWRHFEMDGLPRIHNLRKQLDPISPSEWGKILYELVIISVFLDAGAGPLWRYKEALTEKEY
SRSEGLALASLYLYESGAFSADPTNPFRVDAERLLDFKETDLIKGFQVSSTNLLEGIPGRVSLLNRLGEIIHRKEHCFNR
RKRLGEFYTYVESLQDNKILPTTKLFEAVLETFNDIWPVRLIYHGVSLGDVWIHSALKTNEAGSEYIPFHKLSQWLTYSL
VEPLEQTGIDIADLDVLTGLPEYRNGGLLIDTELLKVRNNKILEQPQDPGSEPIVEWRALTVALLDELALLIRQQLNMNA
ESLPLAKILQGGTWEAGRQIAQKKRINGTPPIEIISDGTIF

Sequences:

>Translated_441_residues
MPSVQQDITHPKELLISTNWLNRKDVPFMNNQEQQIQNVLNTLRDPDTIRTRSHRILNLAKQNRLEHFSLNPERMTTTAS
YIVDIITSRYPELDIPYHSRWRHFEMDGLPRIHNLRKQLDPISPSEWGKILYELVIISVFLDAGAGPLWRYKEALTEKEY
SRSEGLALASLYLYESGAFSADPTNPFRVDAERLLDFKETDLIKGFQVSSTNLLEGIPGRVSLLNRLGEIIHRKEHCFNR
RKRLGEFYTYVESLQDNKILPTTKLFEAVLETFNDIWPVRLIYHGVSLGDVWIHSALKTNEAGSEYIPFHKLSQWLTYSL
VEPLEQTGIDIADLDVLTGLPEYRNGGLLIDTELLKVRNNKILEQPQDPGSEPIVEWRALTVALLDELALLIRQQLNMNA
ESLPLAKILQGGTWEAGRQIAQKKRINGTPPIEIISDGTIF
>Mature_440_residues
PSVQQDITHPKELLISTNWLNRKDVPFMNNQEQQIQNVLNTLRDPDTIRTRSHRILNLAKQNRLEHFSLNPERMTTTASY
IVDIITSRYPELDIPYHSRWRHFEMDGLPRIHNLRKQLDPISPSEWGKILYELVIISVFLDAGAGPLWRYKEALTEKEYS
RSEGLALASLYLYESGAFSADPTNPFRVDAERLLDFKETDLIKGFQVSSTNLLEGIPGRVSLLNRLGEIIHRKEHCFNRR
KRLGEFYTYVESLQDNKILPTTKLFEAVLETFNDIWPVRLIYHGVSLGDVWIHSALKTNEAGSEYIPFHKLSQWLTYSLV
EPLEQTGIDIADLDVLTGLPEYRNGGLLIDTELLKVRNNKILEQPQDPGSEPIVEWRALTVALLDELALLIRQQLNMNAE
SLPLAKILQGGTWEAGRQIAQKKRINGTPPIEIISDGTIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50642; Mature: 50510

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVQQDITHPKELLISTNWLNRKDVPFMNNQEQQIQNVLNTLRDPDTIRTRSHRILNLA
CCCCHHHHCCHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KQNRLEHFSLNPERMTTTASYIVDIITSRYPELDIPYHSRWRHFEMDGLPRIHNLRKQLD
HHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCC
PISPSEWGKILYELVIISVFLDAGAGPLWRYKEALTEKEYSRSEGLALASLYLYESGAFS
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHEECCCCC
ADPTNPFRVDAERLLDFKETDLIKGFQVSSTNLLEGIPGRVSLLNRLGEIIHRKEHCFNR
CCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RKRLGEFYTYVESLQDNKILPTTKLFEAVLETFNDIWPVRLIYHGVSLGDVWIHSALKTN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCC
EAGSEYIPFHKLSQWLTYSLVEPLEQTGIDIADLDVLTGLPEYRNGGLLIDTELLKVRNN
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEHHHHHHHCC
KILEQPQDPGSEPIVEWRALTVALLDELALLIRQQLNMNAESLPLAKILQGGTWEAGRQI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHH
AQKKRINGTPPIEIISDGTIF
HHHHCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
PSVQQDITHPKELLISTNWLNRKDVPFMNNQEQQIQNVLNTLRDPDTIRTRSHRILNLA
CCCHHHHCCHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KQNRLEHFSLNPERMTTTASYIVDIITSRYPELDIPYHSRWRHFEMDGLPRIHNLRKQLD
HHCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCC
PISPSEWGKILYELVIISVFLDAGAGPLWRYKEALTEKEYSRSEGLALASLYLYESGAFS
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHEECCCCC
ADPTNPFRVDAERLLDFKETDLIKGFQVSSTNLLEGIPGRVSLLNRLGEIIHRKEHCFNR
CCCCCCCCCCHHHHHCCHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RKRLGEFYTYVESLQDNKILPTTKLFEAVLETFNDIWPVRLIYHGVSLGDVWIHSALKTN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCC
EAGSEYIPFHKLSQWLTYSLVEPLEQTGIDIADLDVLTGLPEYRNGGLLIDTELLKVRNN
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEHHHHHHHCC
KILEQPQDPGSEPIVEWRALTVALLDELALLIRQQLNMNAESLPLAKILQGGTWEAGRQI
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHH
AQKKRINGTPPIEIISDGTIF
HHHHCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA