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The map label for this gene is 52842438

Identifier: 52842438

GI number: 52842438

Start: 2514038

End: 2515567

Strand: Reverse

Name: 52842438

Synonym: lpg2225

Alternate gene names: NA

Gene position: 2515567-2514038 (Counterclockwise)

Preceding gene: 52842439

Following gene: 52842436

Centisome position: 74.04

GC content: 40.0

Gene sequence:

>1530_bases
ATGAATTGGAAAAGGTTTTTAATTGCTGCCATGACAAAGAAAAAATACCAATTTTTTCTGAATGATACCAAACATCCTAA
AGAGGCCAGAGAACGATTATGGAATTCAGAAATTGTCCCGTTGCTGAAAAAATCATCTTATTGGCAGGAATTATTAAAAG
ATCAATCTTCTATAGTTCTTAATGATTTTGGAATTACAGAATATGAAGATTATCAGGAAGGATTGTTGGCAGCCCAGCAT
TCTACTATCCAACCTTTTAATGGTGAGGAATTGATTTTTTGGTCAGAAACTTCAGGAACATCAGGAGTTAGAAAGTTTTT
CCCTATAACAGATTCATTTCAGAAACAATTTCAGCGTACAATGGCCCCGTATATTTACAGTCTAACTCAGCGATTCCCCG
GCTTTTTTAAGGAAAAAATGTTGTATCTTGTCGCGGTAGATACTCATAAAACGACTCCTGCCGGTATTCCTACGGGATGG
ATTAGTAATTTTAATTATCGTCATTTGCCTTCCTTTATTAAAAAATTTTATGCCATGCCTGATGAGGTTTTTGCCAGCCA
TGAAGCATACAACCAGTGGGGACCCATCTATGGTTTGGCTTCTGATTTAAGTGCGGTATTTGCGGTGACGCCGATGGTAA
TCGATGCTTTTTATCAACGCTGCATCGACGGTTTTAAAGACTATCTTCCTTATTTATTGGGAGATAAACTTCTTCCATCA
CATCTTCCACCTCTCAAAATAACCCGGAAACGACGAAGACATTTGCAGGCTTTAGCCAAGGTTGACCATCTCTCATTCAA
ACAACTGTGGCCATCACTGGAAATGGCTGGATGCTGGACCTCTGGTCTTTGTGAGTATCCCGCTCAGCAATTACAAAAAT
TGCTGGGTTCTGAGATTAAACTGGTAGACGGTACTTATTCGGCAACCGAGGGGTGGTTAACAGTTCCTGTAGAGACTAAC
AGCGTGGGTGGAATTTTACATCCAGGTGCCCATATTGTGGAGTTTATTCCAGAGGGGGCGGCAATTGAAAAAGAGAATCT
TTTACAATGTTGGGAGTTGGAAGTAGGGAAGAAATACGAAGTATTTTTGACAACAGCTATGGGATTTGTTCGCTACAGAC
TCAAAGATATTGTGAAATGTACCGGATATTTGAATAGTTCACCAAAGCTTGAGTTTTGTTATAAAACTCAACTTCTGAAA
TTGGAAACCTGCTCAATTACAGGCAAGGAACTGCAAAGTGCAGTCCAGGCAACCCTGATCAACCTAGAGCCTTATTGGTA
TTTTGCGCGCAATAGTGTTGGGAATCGTATTGTTTTAGTGACTGATGATGAGGCAGAGATTTCTGAGTTACCACTGAAAA
AACTGCATGAGCAATTAATCCATATTAGCCCGACTTATGCTCATAGTGTGGAAACCGAAGAAGTTTTGCCCGTGACCTTG
TTGCAACTTCCAAAGGAGAAATTATTAGCTGGCATGCATGGGCAAACCAAACCGAAATTTATCTCTCAGGAGGTTATTGC
TGAGAGATAA

Upstream 100 bases:

>100_bases
TAGCTTGTTACAAGAAGCTATGAGTGAGCGTTTGTATTCTTTTTATCAGGAAAAACAGCTGTTTTCTATTATGCCAATAC
ATATTGCGGGGTAATGAAGG

Downstream 100 bases:

>100_bases
CATACCTGAAAATAAAGCTTCAACATATCGACTGAGTGACAAATGTAAACAGGCCCTGAAAGAATTTATCATTGTTGTTT
AAATTATGACGATTGTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: Plant Auxin-Responsive GH3-Like Protein; GH3 Auxin-Responsive Promoter Superfamily; Expressed Protein; GH3 Auxin-Responsive Promoter Family Protein; Auxin-Responsive-Like Protein; Auxin-Responsive GH3-Related Protein; Alpha-L-Glutamate Ligase

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MNWKRFLIAAMTKKKYQFFLNDTKHPKEARERLWNSEIVPLLKKSSYWQELLKDQSSIVLNDFGITEYEDYQEGLLAAQH
STIQPFNGEELIFWSETSGTSGVRKFFPITDSFQKQFQRTMAPYIYSLTQRFPGFFKEKMLYLVAVDTHKTTPAGIPTGW
ISNFNYRHLPSFIKKFYAMPDEVFASHEAYNQWGPIYGLASDLSAVFAVTPMVIDAFYQRCIDGFKDYLPYLLGDKLLPS
HLPPLKITRKRRRHLQALAKVDHLSFKQLWPSLEMAGCWTSGLCEYPAQQLQKLLGSEIKLVDGTYSATEGWLTVPVETN
SVGGILHPGAHIVEFIPEGAAIEKENLLQCWELEVGKKYEVFLTTAMGFVRYRLKDIVKCTGYLNSSPKLEFCYKTQLLK
LETCSITGKELQSAVQATLINLEPYWYFARNSVGNRIVLVTDDEAEISELPLKKLHEQLIHISPTYAHSVETEEVLPVTL
LQLPKEKLLAGMHGQTKPKFISQEVIAER

Sequences:

>Translated_509_residues
MNWKRFLIAAMTKKKYQFFLNDTKHPKEARERLWNSEIVPLLKKSSYWQELLKDQSSIVLNDFGITEYEDYQEGLLAAQH
STIQPFNGEELIFWSETSGTSGVRKFFPITDSFQKQFQRTMAPYIYSLTQRFPGFFKEKMLYLVAVDTHKTTPAGIPTGW
ISNFNYRHLPSFIKKFYAMPDEVFASHEAYNQWGPIYGLASDLSAVFAVTPMVIDAFYQRCIDGFKDYLPYLLGDKLLPS
HLPPLKITRKRRRHLQALAKVDHLSFKQLWPSLEMAGCWTSGLCEYPAQQLQKLLGSEIKLVDGTYSATEGWLTVPVETN
SVGGILHPGAHIVEFIPEGAAIEKENLLQCWELEVGKKYEVFLTTAMGFVRYRLKDIVKCTGYLNSSPKLEFCYKTQLLK
LETCSITGKELQSAVQATLINLEPYWYFARNSVGNRIVLVTDDEAEISELPLKKLHEQLIHISPTYAHSVETEEVLPVTL
LQLPKEKLLAGMHGQTKPKFISQEVIAER
>Mature_509_residues
MNWKRFLIAAMTKKKYQFFLNDTKHPKEARERLWNSEIVPLLKKSSYWQELLKDQSSIVLNDFGITEYEDYQEGLLAAQH
STIQPFNGEELIFWSETSGTSGVRKFFPITDSFQKQFQRTMAPYIYSLTQRFPGFFKEKMLYLVAVDTHKTTPAGIPTGW
ISNFNYRHLPSFIKKFYAMPDEVFASHEAYNQWGPIYGLASDLSAVFAVTPMVIDAFYQRCIDGFKDYLPYLLGDKLLPS
HLPPLKITRKRRRHLQALAKVDHLSFKQLWPSLEMAGCWTSGLCEYPAQQLQKLLGSEIKLVDGTYSATEGWLTVPVETN
SVGGILHPGAHIVEFIPEGAAIEKENLLQCWELEVGKKYEVFLTTAMGFVRYRLKDIVKCTGYLNSSPKLEFCYKTQLLK
LETCSITGKELQSAVQATLINLEPYWYFARNSVGNRIVLVTDDEAEISELPLKKLHEQLIHISPTYAHSVETEEVLPVTL
LQLPKEKLLAGMHGQTKPKFISQEVIAER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58353; Mature: 58353

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWKRFLIAAMTKKKYQFFLNDTKHPKEARERLWNSEIVPLLKKSSYWQELLKDQSSIVL
CCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCCCEEE
NDFGITEYEDYQEGLLAAQHSTIQPFNGEELIFWSETSGTSGVRKFFPITDSFQKQFQRT
ECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHH
MAPYIYSLTQRFPGFFKEKMLYLVAVDTHKTTPAGIPTGWISNFNYRHLPSFIKKFYAMP
HHHHHHHHHHHCCCHHHHCEEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCC
DEVFASHEAYNQWGPIYGLASDLSAVFAVTPMVIDAFYQRCIDGFKDYLPYLLGDKLLPS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HLPPLKITRKRRRHLQALAKVDHLSFKQLWPSLEMAGCWTSGLCEYPAQQLQKLLGSEIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCCEE
LVDGTYSATEGWLTVPVETNSVGGILHPGAHIVEFIPEGAAIEKENLLQCWELEVGKKYE
EECCCCCCCCCEEEEEEECCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEE
VFLTTAMGFVRYRLKDIVKCTGYLNSSPKLEFCYKTQLLKLETCSITGKELQSAVQATLI
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHE
NLEPYWYFARNSVGNRIVLVTDDEAEISELPLKKLHEQLIHISPTYAHSVETEEVLPVTL
ECCCEEEEEECCCCCEEEEEECCCHHHHHCCHHHHHHHHHCCCCHHHCCCCCHHCCHHHH
LQLPKEKLLAGMHGQTKPKFISQEVIAER
HHCCHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNWKRFLIAAMTKKKYQFFLNDTKHPKEARERLWNSEIVPLLKKSSYWQELLKDQSSIVL
CCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCCCEEE
NDFGITEYEDYQEGLLAAQHSTIQPFNGEELIFWSETSGTSGVRKFFPITDSFQKQFQRT
ECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHH
MAPYIYSLTQRFPGFFKEKMLYLVAVDTHKTTPAGIPTGWISNFNYRHLPSFIKKFYAMP
HHHHHHHHHHHCCCHHHHCEEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCC
DEVFASHEAYNQWGPIYGLASDLSAVFAVTPMVIDAFYQRCIDGFKDYLPYLLGDKLLPS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HLPPLKITRKRRRHLQALAKVDHLSFKQLWPSLEMAGCWTSGLCEYPAQQLQKLLGSEIK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCCEE
LVDGTYSATEGWLTVPVETNSVGGILHPGAHIVEFIPEGAAIEKENLLQCWELEVGKKYE
EECCCCCCCCCEEEEEEECCCCCCEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEE
VFLTTAMGFVRYRLKDIVKCTGYLNSSPKLEFCYKTQLLKLETCSITGKELQSAVQATLI
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHE
NLEPYWYFARNSVGNRIVLVTDDEAEISELPLKKLHEQLIHISPTYAHSVETEEVLPVTL
ECCCEEEEEECCCCCEEEEEECCCHHHHHCCHHHHHHHHHCCCCHHHCCCCCHHCCHHHH
LQLPKEKLLAGMHGQTKPKFISQEVIAER
HHCCHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA