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The map label for this gene is tnpA [H]

Identifier: 52842387

GI number: 52842387

Start: 2438461

End: 2439636

Strand: Direct

Name: tnpA [H]

Synonym: lpg2173

Alternate gene names: 52842387

Gene position: 2438461-2439636 (Clockwise)

Preceding gene: 52842385

Following gene: 52842388

Centisome position: 71.77

GC content: 36.48

Gene sequence:

>1176_bases
GTGCCGAGACATGATGTTATCCTAAATTTGCCTGGTTTTACTATAAAAAAAGCAAGTGGTTATCAACCCTTGTTATTGGA
TTTAACCTATAACCGTTTACCACGCTGTTCTCATTGTTCAAGCAAAAAGGTTCGAAAGAAATCGAGTTATGAACGAAAGG
TTCATCATGAATTAATAGGTCACAGACGGACTATTCTTCGATTCAAAGCATACAAACTGTTTTGCAATGAATGCGGTCGT
TATGGTAATCAACAATTTCCCGGAATTGCTAAATATCAACGGTCTACAGAGCGTTTACAAGTTCAAATATTTCATCACCA
TACGAGTGGTATTTCCCAGAAAGAGTTATCTCTTCAATTTAAACAAGGGAAAGCAACCATTGAACGTTGGTATCATAGAC
GCTATCAAATAGAAGGAAATGAATTGCTCAATACGCCTTGTCCAAAAGTGTTAGGTCTTGATGAGCACTTCTTTAGTCGA
AAACATGGCTTTGCAACTACCTTATGTGACCTTAAAAAGCATAAAGTGTTTGATATCGTTAAAGGACGAAGAGAGGTTGA
TTTAAATCACTACCTTAACTCTTTAAAAGGGAAAGACCGTGTTCAAGTGGTCTGTATGGATTTAAGTAATACCTACCGCT
CTCTGGTCAAAAAGCATTTCCCAAACGCTAAAATAGTAGCTGATAGGTTTCACGTCATTCGATTAGTACAACATCAATGT
ATGATGACTTATCGTGAGTTATCCAGCTCAATTAAAAATAACCGAGGTCTATTGGCTTTGTTGCGAACCAAACCAGATAA
ACTCACATCTCATAAGAAAATAAAGCGAGACACTTTCCTCGCTGAAAATCCAGCCATTGAAGCCATTTATCACTTCCAAC
AACAGCTTCATGAGCTATTAATGAATAAAACTCTAACTAAAGTACGATGCCGTAAAATCATTCCTCTCTTCTTAAAAATG
ATTCAGAACTTGAAACAAAGCCCATTTAAATCATTAGTTGCCCTGGGAAAAACCTTAGATTCATGGAAAGAAGAAATTGC
CTGTATGTGGCGGTTTAGTAAATCAAATGGCATCACTGAAGGATTTCATCGGAAAATGAAACTAATACAACGAAGAGCTT
ATGGGTTTAGAAACTTTGAAAACTACCGATTAAGAGTTAGAGTATTATGTGCTTGA

Upstream 100 bases:

>100_bases
AATAAAGCATATTTTAATGGCTCTACCCCAACAAAGGGGGCACTTTAATCAAGTTAGTATAAACTAACCTCTTGATTTCG
CGATCAAAAAGGAGATTAAA

Downstream 100 bases:

>100_bases
TAAAATGCCCCCGTATTTGGGAAAGACCCATTTTAATTTGTGAGGATTGGGCGATTAATTATTGATTGGGCCGTATAGGA
TTCGAACCTATGACCCTGAG

Product: TnpA transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPRHDVILNLPGFTIKKASGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIGHRRTILRFKAYKLFCNECGR
YGNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQFKQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSR
KHGFATTLCDLKKHKVFDIVKGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQC
MMTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHELLMNKTLTKVRCRKIIPLFLKM
IQNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRLRVRVLCA

Sequences:

>Translated_391_residues
MPRHDVILNLPGFTIKKASGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIGHRRTILRFKAYKLFCNECGR
YGNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQFKQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSR
KHGFATTLCDLKKHKVFDIVKGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQC
MMTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHELLMNKTLTKVRCRKIIPLFLKM
IQNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRLRVRVLCA
>Mature_390_residues
PRHDVILNLPGFTIKKASGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIGHRRTILRFKAYKLFCNECGRY
GNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQFKQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSRK
HGFATTLCDLKKHKVFDIVKGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQCM
MTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHELLMNKTLTKVRCRKIIPLFLKMI
QNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITEGFHRKMKLIQRRAYGFRNFENYRLRVRVLCA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46194; Mature: 46063

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRHDVILNLPGFTIKKASGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIG
CCCCCEEEECCCCEEECCCCCCCEEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HRRTILRFKAYKLFCNECGRYGNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHH
KQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSRKHGFATTLCDLKKHKVFDIV
HCCHHHHHHHHHHHEEECCCHHCCCCCCHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
KGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQC
CCCHHCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
MMTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHELL
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MNKTLTKVRCRKIIPLFLKMIQNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITE
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH
GFHRKMKLIQRRAYGFRNFENYRLRVRVLCA
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
PRHDVILNLPGFTIKKASGYQPLLLDLTYNRLPRCSHCSSKKVRKKSSYERKVHHELIG
CCCCEEEECCCCEEECCCCCCCEEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HRRTILRFKAYKLFCNECGRYGNQQFPGIAKYQRSTERLQVQIFHHHTSGISQKELSLQF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHH
KQGKATIERWYHRRYQIEGNELLNTPCPKVLGLDEHFFSRKHGFATTLCDLKKHKVFDIV
HCCHHHHHHHHHHHEEECCCHHCCCCCCHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
KGRREVDLNHYLNSLKGKDRVQVVCMDLSNTYRSLVKKHFPNAKIVADRFHVIRLVQHQC
CCCHHCCHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH
MMTYRELSSSIKNNRGLLALLRTKPDKLTSHKKIKRDTFLAENPAIEAIYHFQQQLHELL
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MNKTLTKVRCRKIIPLFLKMIQNLKQSPFKSLVALGKTLDSWKEEIACMWRFSKSNGITE
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH
GFHRKMKLIQRRAYGFRNFENYRLRVRVLCA
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]