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The map label for this gene is 52842384

Identifier: 52842384

GI number: 52842384

Start: 2435166

End: 2435807

Strand: Direct

Name: 52842384

Synonym: lpg2170

Alternate gene names: NA

Gene position: 2435166-2435807 (Clockwise)

Preceding gene: 52842383

Following gene: 52842385

Centisome position: 71.67

GC content: 38.01

Gene sequence:

>642_bases
CTGTATTTTTTAAAAAGGAGATACAGAATGGTATGGGACGCAACGACAACAAACGCCATCTCTAATGCCGCCCATGCGCT
TTTCCTGTTATTGTACTTAATTGGTGCCTGCATCCACTACTTAAAAAAAGATCATACTTTTTCGCTTTTGATTGTGTTTT
TTTTCTTAAACCTCCTTGTTCTCAAGGTATTGGGAGTTTATGTCCATTACTACCCTTCTCATTTGCATTTACCACCAGCC
TGGATTGCGATTAGTTTGCTTGTAATCATGCTTAATTATCTGCTTGTCCAATCAATGCAAATGCCCGATTTGTGCCGAGT
TATCGTAGTATTTCTATCCATCGTCTTCACTTATCTGTTCCTGACCCACGATGGAAATTATACCTACATTGCCCTTCCTG
TCATCCTTGTATGTTTGATTGCGGCTTATTATTCGCAAGCAAAAGTCAGGATTGGCTTTGTCATGGTCGTTATATCAAAC
CTGATATGGATAGTTACAAGACATATTGCAAACTATCTCACTGGTCATGAAATACCTATAGAATATCGCTATGATAATGA
TATCTATCATATCCTTTTAATTCTCTCTACTTATGTGATCTATAAGGGTATTGCCGAAGGGCAATGGAAACATCCTCGTT
AA

Upstream 100 bases:

>100_bases
AGTATGGCTTTTAAGTGAGTGATATCACACATCCCAAGCTGCTACAAGCTACAATTACTATTAGCAAATGAACAAACATC
GGGACATCGACCGCTGATAG

Downstream 100 bases:

>100_bases
AAATATCATTGAGAAACCTATACTTATCAAAAGCAATGTCAAGATATGAGTGAATAATTTAATCACTTTGAAATGAACCA
TTTCCTGAGCATGAATTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MYFLKRRYRMVWDATTTNAISNAAHALFLLLYLIGACIHYLKKDHTFSLLIVFFFLNLLVLKVLGVYVHYYPSHLHLPPA
WIAISLLVIMLNYLLVQSMQMPDLCRVIVVFLSIVFTYLFLTHDGNYTYIALPVILVCLIAAYYSQAKVRIGFVMVVISN
LIWIVTRHIANYLTGHEIPIEYRYDNDIYHILLILSTYVIYKGIAEGQWKHPR

Sequences:

>Translated_213_residues
MYFLKRRYRMVWDATTTNAISNAAHALFLLLYLIGACIHYLKKDHTFSLLIVFFFLNLLVLKVLGVYVHYYPSHLHLPPA
WIAISLLVIMLNYLLVQSMQMPDLCRVIVVFLSIVFTYLFLTHDGNYTYIALPVILVCLIAAYYSQAKVRIGFVMVVISN
LIWIVTRHIANYLTGHEIPIEYRYDNDIYHILLILSTYVIYKGIAEGQWKHPR
>Mature_213_residues
MYFLKRRYRMVWDATTTNAISNAAHALFLLLYLIGACIHYLKKDHTFSLLIVFFFLNLLVLKVLGVYVHYYPSHLHLPPA
WIAISLLVIMLNYLLVQSMQMPDLCRVIVVFLSIVFTYLFLTHDGNYTYIALPVILVCLIAAYYSQAKVRIGFVMVVISN
LIWIVTRHIANYLTGHEIPIEYRYDNDIYHILLILSTYVIYKGIAEGQWKHPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24892; Mature: 24892

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFLKRRYRMVWDATTTNAISNAAHALFLLLYLIGACIHYLKKDHTFSLLIVFFFLNLLV
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LKVLGVYVHYYPSHLHLPPAWIAISLLVIMLNYLLVQSMQMPDLCRVIVVFLSIVFTYLF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LTHDGNYTYIALPVILVCLIAAYYSQAKVRIGFVMVVISNLIWIVTRHIANYLTGHEIPI
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
EYRYDNDIYHILLILSTYVIYKGIAEGQWKHPR
EEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYFLKRRYRMVWDATTTNAISNAAHALFLLLYLIGACIHYLKKDHTFSLLIVFFFLNLLV
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LKVLGVYVHYYPSHLHLPPAWIAISLLVIMLNYLLVQSMQMPDLCRVIVVFLSIVFTYLF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LTHDGNYTYIALPVILVCLIAAYYSQAKVRIGFVMVVISNLIWIVTRHIANYLTGHEIPI
HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
EYRYDNDIYHILLILSTYVIYKGIAEGQWKHPR
EEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA