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The map label for this gene is 52842324

Identifier: 52842324

GI number: 52842324

Start: 2355910

End: 2356398

Strand: Reverse

Name: 52842324

Synonym: lpg2110

Alternate gene names: NA

Gene position: 2356398-2355910 (Counterclockwise)

Preceding gene: 52842325

Following gene: 52842323

Centisome position: 69.35

GC content: 35.99

Gene sequence:

>489_bases
ATGGTTAACAATTTTATAAGGATAGCAGCGATGAAAAAAATTAAATCATTGTATATACCGCAATTAATATTTATTTTTAT
GATGCCAGTTCTTGCCTGGGCTTCAGATATTTCCTACAGTTTGGTGGGTATTCAGGGGTATGATCCTGTGTCTTATTTTC
AACAAGGTGGGCCTGTACGTGGTAGCGGAAACTACACGGGATATTATGAAGGTGTGAGTTATATTTTTTCTAATCAAGAG
AACAAAAAAACATTTCTTGCAAATCCTGAAAAATATCTTCCCGCTTATGGAGGATATTGCGCGTATGGCGTATCCGTTGG
GAGCAAAATAGTGAGTGATCCTTTAGCTTGGAGAATTGTGGATGGAACACTCTATCTAAATTTAAACAGCAAAACACAAG
ATGTTTGGGCAAAAAATATACCTGGCAACATAAAGAAGGCAAATATTAATTGGCCAAAAATTAAAGGCATCGACCCTAAA
GACTTATAA

Upstream 100 bases:

>100_bases
GCCGCAATTTTTTTGGCAACAAAAGCGCCGCTTTGTTATGCGGCAGGTGCAAGTCCAGGGAAAGATTTTCCGTACCACTT
CAATGTAAAAAGATTTAAAT

Downstream 100 bases:

>100_bases
TAAGTTGCACTGTTTTAATATAATTCTCCTTCCCACTTAGTTTGCATCCGGATTTGTTTTGCGGTTCGAATTAAGAAGTT
TGGAAGGGGAAATGATGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: YHS Domain-Containing Protein; YHS Domain Family; Tat Pathway Signal Sequence Domain Protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVNNFIRIAAMKKIKSLYIPQLIFIFMMPVLAWASDISYSLVGIQGYDPVSYFQQGGPVRGSGNYTGYYEGVSYIFSNQE
NKKTFLANPEKYLPAYGGYCAYGVSVGSKIVSDPLAWRIVDGTLYLNLNSKTQDVWAKNIPGNIKKANINWPKIKGIDPK
DL

Sequences:

>Translated_162_residues
MVNNFIRIAAMKKIKSLYIPQLIFIFMMPVLAWASDISYSLVGIQGYDPVSYFQQGGPVRGSGNYTGYYEGVSYIFSNQE
NKKTFLANPEKYLPAYGGYCAYGVSVGSKIVSDPLAWRIVDGTLYLNLNSKTQDVWAKNIPGNIKKANINWPKIKGIDPK
DL
>Mature_162_residues
MVNNFIRIAAMKKIKSLYIPQLIFIFMMPVLAWASDISYSLVGIQGYDPVSYFQQGGPVRGSGNYTGYYEGVSYIFSNQE
NKKTFLANPEKYLPAYGGYCAYGVSVGSKIVSDPLAWRIVDGTLYLNLNSKTQDVWAKNIPGNIKKANINWPKIKGIDPK
DL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18122; Mature: 18122

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNNFIRIAAMKKIKSLYIPQLIFIFMMPVLAWASDISYSLVGIQGYDPVSYFQQGGPVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCC
GSGNYTGYYEGVSYIFSNQENKKTFLANPEKYLPAYGGYCAYGVSVGSKIVSDPLAWRIV
CCCCCCEEHHHHHHHHCCCCCCEEEECCCHHHCCCCCCEEEHHHHHHHHHHCCCCEEEEE
DGTLYLNLNSKTQDVWAKNIPGNIKKANINWPKIKGIDPKDL
CCEEEEEECCCCHHHHHCCCCCCEEECCCCCCEECCCCCCCC
>Mature Secondary Structure
MVNNFIRIAAMKKIKSLYIPQLIFIFMMPVLAWASDISYSLVGIQGYDPVSYFQQGGPVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCC
GSGNYTGYYEGVSYIFSNQENKKTFLANPEKYLPAYGGYCAYGVSVGSKIVSDPLAWRIV
CCCCCCEEHHHHHHHHCCCCCCEEEECCCHHHCCCCCCEEEHHHHHHHHHHCCCCEEEEE
DGTLYLNLNSKTQDVWAKNIPGNIKKANINWPKIKGIDPKDL
CCEEEEEECCCCHHHHHCCCCCCEEECCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA