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The map label for this gene is traV

Identifier: 52842302

GI number: 52842302

Start: 2339878

End: 2340228

Strand: Reverse

Name: traV

Synonym: lpg2088

Alternate gene names: 52842302

Gene position: 2340228-2339878 (Counterclockwise)

Preceding gene: 52842303

Following gene: 52842301

Centisome position: 68.88

GC content: 45.87

Gene sequence:

>351_bases
ATGAAAATTTTAACTACTTTATTACTGTTGCCCTGTGTTGTTTTGACCGGTTGCGCCAAATTGAATGAGGACTTTGATTG
CCCAGCTCCCAATGGAGGAACGTGCAAACGTATGGATCAGGTTTATGACATGGTGAATGGTAAGGGCAAATCCCTGGCTG
TAACCCCCAGCCGAAATCCTTTGGTGATGGATGGGCGACCTGGTCAGCCTGTGCGTTATGGAGAAGGGGTGATGCCTCTT
TGGATAGCACCTTATGAAGACACTGATGGCAATTATCATCAAGCCAATCGAGTGTACAGCGTTGTTAAGGAAGGACAGTG
GATGCAGCAGTCACAATTGGCTTTAAAATAA

Upstream 100 bases:

>100_bases
AAAGTAGCTTTTGAAGCCCCTGCCGAGTCTGAGACTGCTGAAGAAAAAGCTGCCAACCAATTTTTCTATAAAAACCACTC
TTTCTAAGGATATATAGATC

Downstream 100 bases:

>100_bases
GGGGAGCCATTATGTTGTCAACTATAAAAAAAGCGCGTCTTGCAGTTAAAAAAACAAGCACTATTTTAAGTCATGCAACA
GGCTCGCTATTGGAAACATT

Product: conjugative transfer: assembly

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKILTTLLLLPCVVLTGCAKLNEDFDCPAPNGGTCKRMDQVYDMVNGKGKSLAVTPSRNPLVMDGRPGQPVRYGEGVMPL
WIAPYEDTDGNYHQANRVYSVVKEGQWMQQSQLALK

Sequences:

>Translated_116_residues
MKILTTLLLLPCVVLTGCAKLNEDFDCPAPNGGTCKRMDQVYDMVNGKGKSLAVTPSRNPLVMDGRPGQPVRYGEGVMPL
WIAPYEDTDGNYHQANRVYSVVKEGQWMQQSQLALK
>Mature_116_residues
MKILTTLLLLPCVVLTGCAKLNEDFDCPAPNGGTCKRMDQVYDMVNGKGKSLAVTPSRNPLVMDGRPGQPVRYGEGVMPL
WIAPYEDTDGNYHQANRVYSVVKEGQWMQQSQLALK

Specific function: Involved In F Pilus Assembly. Appear To Facilitate The Polymerization Of Inner Membrane-Located Pilin Subunits Into Extracellular F Pilus Filaments. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12830; Mature: 12830

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILTTLLLLPCVVLTGCAKLNEDFDCPAPNGGTCKRMDQVYDMVNGKGKSLAVTPSRNP
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCC
LVMDGRPGQPVRYGEGVMPLWIAPYEDTDGNYHQANRVYSVVKEGQWMQQSQLALK
EEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKILTTLLLLPCVVLTGCAKLNEDFDCPAPNGGTCKRMDQVYDMVNGKGKSLAVTPSRNP
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCC
LVMDGRPGQPVRYGEGVMPLWIAPYEDTDGNYHQANRVYSVVKEGQWMQQSQLALK
EEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA