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The map label for this gene is traW [H]

Identifier: 52842300

GI number: 52842300

Start: 2336381

End: 2336989

Strand: Reverse

Name: traW [H]

Synonym: lpg2086

Alternate gene names: 52842300

Gene position: 2336989-2336381 (Counterclockwise)

Preceding gene: 52842301

Following gene: 52842299

Centisome position: 68.78

GC content: 41.38

Gene sequence:

>609_bases
GTGAAAAAGCTTCTGTTGATTATTTGCATGCTCTATCTCCCTTTTGCAGAGGCTAAAGACTATGGTGTCTTTGGCAAAAC
CTTTGAAATTGCTGAAATAGATTTTTTAGAGTACATCCAGCAAAAAATGAAGGGGATGCAGGTTAATGGGGAATGGAAGA
CCGTACAATCTGAGTTTAAAAAACGGGTAAAAGAACATGTGGCACGCCCAACACCTATTCGTTTGCCGAGAGCAGAAGAC
AATAGAACGTGGTTTTTTAATCCATCACTTGCTGTGCCTTACGATGTGAAGGACAGTCACGGCCAAGTGATTGTTAAACA
AGGCACTGTAATTAACCCCCTGGATAGAGTGGGCTTGAGTAGCACTCTCCTGTTTTTTGACGGGGATGATGAGGCACAGG
TTGCATGGGTTACCCAGGAATTAACGCAGCACCAAAAAGTAAAATTAATCCTCACCTCAGGCTCTGTAAAGGAAGTTGCG
AATCAATTAAAGCAAGCTATTTATTTTGATTTAAATGGATTTTTGGTTGCCAAATTTCAAATAAAGTATTTGCCGGCGCG
GGTTTTTCAAGCAGGGAAGCGGTTGCAAATTAATGAGGTGACTGTATGA

Upstream 100 bases:

>100_bases
ATTCCAAATCGTTGGTGTTATTACCAAGAGAAGCGGTCATTAAAGGCAGCACTGATTATACAGCCACCCTCATGACGATG
ATCAAATTGGAGCATAAATC

Downstream 100 bases:

>100_bases
AAGCCTTTTTTATTCTTATTGCTTTTTTAGCTTCTGGGTTGACCCAAGCAGGATCTTGTCATGGTCGTTTTGTAAATCCC
ATTACTGATGTCTGTTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFKKRVKEHVARPTPIRLPRAED
NRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGLSSTLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVA
NQLKQAIYFDLNGFLVAKFQIKYLPARVFQAGKRLQINEVTV

Sequences:

>Translated_202_residues
MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFKKRVKEHVARPTPIRLPRAED
NRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGLSSTLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVA
NQLKQAIYFDLNGFLVAKFQIKYLPARVFQAGKRLQINEVTV
>Mature_202_residues
MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFKKRVKEHVARPTPIRLPRAED
NRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGLSSTLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVA
NQLKQAIYFDLNGFLVAKFQIKYLPARVFQAGKRLQINEVTV

Specific function: Involved in F-pilus assembly. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014114 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23167; Mature: 23167

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFK
CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KRVKEHVARPTPIRLPRAEDNRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGLS
HHHHHHCCCCCCEECCCCCCCCEEEECCCEECCCCCCCCCCEEEEECCCEECHHHHCCCC
STLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVANQLKQAIYFDLNGFLVAKFQ
EEEEEEECCCCCEEEHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHEECCCCEEEEEEE
IKYLPARVFQAGKRLQINEVTV
EEEHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFK
CHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KRVKEHVARPTPIRLPRAEDNRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGLS
HHHHHHCCCCCCEECCCCCCCCEEEECCCEECCCCCCCCCCEEEEECCCEECHHHHCCCC
STLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVANQLKQAIYFDLNGFLVAKFQ
EEEEEEECCCCCEEEHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHEECCCCEEEEEEE
IKYLPARVFQAGKRLQINEVTV
EEEHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1355084; 7915817; 2198250 [H]