Click here to switch to the map view.

The map label for this gene is 52842286

Identifier: 52842286

GI number: 52842286

Start: 2313772

End: 2314146

Strand: Direct

Name: 52842286

Synonym: lpg2072

Alternate gene names: NA

Gene position: 2313772-2314146 (Clockwise)

Preceding gene: 52842285

Following gene: 52842310

Centisome position: 68.1

GC content: 32.27

Gene sequence:

>375_bases
ATGCATCAGCCAGACATCCAACACAATCGAAAAAGAGGTTATATTATGGCTAGAATCACCGTGACCTTACCTGACAATCT
TCATAAACAAATAATTAAAATAGCCGGTAAGGAGAATGATTCACTCTCTTATACGACAACACGGCTTGTTGAAATTGGAC
TGATGGTGATGAACAGTAAGTCTGATAATAAAGATGAGCAGAAGACTACAAACATTGAAGAGTATTGCCAAAAACTCATT
ATTCAAATTAATGGCATCATCAAAGAAATTGCCGTTGATAAATTTAATTTTGATGATGATAAAATCGTTCAAATAACCAA
AGATACCTTAAACAAATTTAATAAATTAAAAGGTATTCAACAGGAATCACTATAG

Upstream 100 bases:

>100_bases
TGTCAGATTTATCTGATGCAGATCTGCATACTGACACTCGTAACCAGTTGAAATATATAGCCTAATATGATCTAATTGTA
ATTAGGGGTGGCGTGCATGG

Downstream 100 bases:

>100_bases
CTTTATCTTGCCCTTAGACTTTTAACATACTCCTCATAATCCGTTGGTCCTAGGTTCAAGTCCTAGTGGGCCCACCAATA
AAATCAAGTAGTTACGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MHQPDIQHNRKRGYIMARITVTLPDNLHKQIIKIAGKENDSLSYTTTRLVEIGLMVMNSKSDNKDEQKTTNIEEYCQKLI
IQINGIIKEIAVDKFNFDDDKIVQITKDTLNKFNKLKGIQQESL

Sequences:

>Translated_124_residues
MHQPDIQHNRKRGYIMARITVTLPDNLHKQIIKIAGKENDSLSYTTTRLVEIGLMVMNSKSDNKDEQKTTNIEEYCQKLI
IQINGIIKEIAVDKFNFDDDKIVQITKDTLNKFNKLKGIQQESL
>Mature_124_residues
MHQPDIQHNRKRGYIMARITVTLPDNLHKQIIKIAGKENDSLSYTTTRLVEIGLMVMNSKSDNKDEQKTTNIEEYCQKLI
IQINGIIKEIAVDKFNFDDDKIVQITKDTLNKFNKLKGIQQESL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14361; Mature: 14361

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQPDIQHNRKRGYIMARITVTLPDNLHKQIIKIAGKENDSLSYTTTRLVEIGLMVMNSK
CCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCC
SDNKDEQKTTNIEEYCQKLIIQINGIIKEIAVDKFNFDDDKIVQITKDTLNKFNKLKGIQ
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCH
QESL
HCCC
>Mature Secondary Structure
MHQPDIQHNRKRGYIMARITVTLPDNLHKQIIKIAGKENDSLSYTTTRLVEIGLMVMNSK
CCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCC
SDNKDEQKTTNIEEYCQKLIIQINGIIKEIAVDKFNFDDDKIVQITKDTLNKFNKLKGIQ
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCH
QESL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA