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The map label for this gene is 52842207

Identifier: 52842207

GI number: 52842207

Start: 2230973

End: 2231707

Strand: Reverse

Name: 52842207

Synonym: lpg1990

Alternate gene names: NA

Gene position: 2231707-2230973 (Counterclockwise)

Preceding gene: 52842208

Following gene: 52842204

Centisome position: 65.68

GC content: 31.43

Gene sequence:

>735_bases
TTGCTAAATAAAATAATTGCTTTAAAGAATCAAATTGAAAAATTAAGTGCCAATCTGGTGTTTGTATTATATTATCAGGA
CATTTTTAATTCTTTAATGTTTGGAGTTTTAGTGGCTTACACAAAATTTTTTGCTATCAATCCGTATGATAAGAAAAGTA
TGAGTATTTACCAATCGGTTAAGAAAGAATTCGAGAAGGATTTAAACCATATCGAGTCCTCTTATAGTGAACTACTCAAA
GATAAAGATTTCAATTCGGCGTTGCAAGTAGAAATGAAAGAACTGGAGTTCAGGTTAAAGTATGTCCTTTTTAATTGGTT
CTTCTTATTCAAAAAGGATAAGCAAGGTTTGAACAAAGAAATTTGTCAGTTCAAAGTAGATATATTGAGATTAAAAACAA
AATTTATGATAAGCCATGTCTTGTTAAATCCTGATAAATACAACCTTGAGCACTACAAACTGGTGGTTAAGCATTTACAT
AATCAACTCGAAGATCTCAATGATAAGATAGGTCTGATGAAAGGTATTGAAATTGATATTTATAGTGACTTACCCTCTGC
GATGTATGAATGGTTTGAGCAAACGTATTCTTTATTAAGTAATCGATATGATGAGTTTAAAGATGAGCTTTCTATAGGCG
ATGTATGGGAAGATTGGAGCTATGACAATTGCAGTAGCGGGGATGATGAGGAGTATGATGAGCCTGTTATTTCATTTAAT
AATACGATTCCCTAA

Upstream 100 bases:

>100_bases
ATTATTCAGATAACATAAAAAGTGTTCATCAAGTTAAATACTTTTTTACTACTCTTGTAGTCTTTATTAAAAGAATTACT
TATGAATTATATAAACCAAT

Downstream 100 bases:

>100_bases
TGAACTAATCTGTCATGCTCCAACTTAATAGGGGTTGTTTTAGTAAGGCAGTGCTTCTGAAATAAGTGTAAGCCAATTTA
TACTTGTTCATTACTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MLNKIIALKNQIEKLSANLVFVLYYQDIFNSLMFGVLVAYTKFFAINPYDKKSMSIYQSVKKEFEKDLNHIESSYSELLK
DKDFNSALQVEMKELEFRLKYVLFNWFFLFKKDKQGLNKEICQFKVDILRLKTKFMISHVLLNPDKYNLEHYKLVVKHLH
NQLEDLNDKIGLMKGIEIDIYSDLPSAMYEWFEQTYSLLSNRYDEFKDELSIGDVWEDWSYDNCSSGDDEEYDEPVISFN
NTIP

Sequences:

>Translated_244_residues
MLNKIIALKNQIEKLSANLVFVLYYQDIFNSLMFGVLVAYTKFFAINPYDKKSMSIYQSVKKEFEKDLNHIESSYSELLK
DKDFNSALQVEMKELEFRLKYVLFNWFFLFKKDKQGLNKEICQFKVDILRLKTKFMISHVLLNPDKYNLEHYKLVVKHLH
NQLEDLNDKIGLMKGIEIDIYSDLPSAMYEWFEQTYSLLSNRYDEFKDELSIGDVWEDWSYDNCSSGDDEEYDEPVISFN
NTIP
>Mature_244_residues
MLNKIIALKNQIEKLSANLVFVLYYQDIFNSLMFGVLVAYTKFFAINPYDKKSMSIYQSVKKEFEKDLNHIESSYSELLK
DKDFNSALQVEMKELEFRLKYVLFNWFFLFKKDKQGLNKEICQFKVDILRLKTKFMISHVLLNPDKYNLEHYKLVVKHLH
NQLEDLNDKIGLMKGIEIDIYSDLPSAMYEWFEQTYSLLSNRYDEFKDELSIGDVWEDWSYDNCSSGDDEEYDEPVISFN
NTIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29094; Mature: 29094

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA