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The map label for this gene is pfpI [H]

Identifier: 52842194

GI number: 52842194

Start: 2216481

End: 2217077

Strand: Direct

Name: pfpI [H]

Synonym: lpg1977

Alternate gene names: 52842194

Gene position: 2216481-2217077 (Clockwise)

Preceding gene: 52842193

Following gene: 52842196

Centisome position: 65.23

GC content: 40.03

Gene sequence:

>597_bases
ATGGAATGCATCATGCCGACTTCAAAAAAAATTCTTATGATTGTAGGAGACTTTAACGAAGATTTGGAAGTTTACTTTCC
CTATCAAGCAATGCTCATGAACAATTACCTCATTGATACTGTTTCCCCCGGCAAAAATAAAGGAGATTTTATTCAGACCG
CTGTACATGATTTGGATAAACCGCATCTTCAATCTTACACCGAAAAATTAGGGCACCTATTCCCCATTACAGCGGATTTC
TCCAAAATCACTTTAAAGGATTATGACGCTTTAATCATCCCGGGTGGAAGAGCTGCTGAATATCAACGTTTGAACAAAGA
TATTTTAGCTATTATCAGGCATTTTCATGACGCCGATAAACCCATTGCCTGCATTTGTCATGGCATACAAATTCTCGCTG
AGGCCGGAATACTTGAAGATAAAAAATGTACGACTGTCGGTTTTTGTGAACCGGATGTTCGAAAAGCAGGAGGACATTTT
ATCGATACAGGGATGGATGGTGTTGTGGTTGATGGTAAATTGGTTACCGGAGCAACATGGCTAGGAAATGCCCCCTGGAT
GAGAGCATTTCTTCATATCTTGCAAAATGAGGGTTAA

Upstream 100 bases:

>100_bases
TTCAACCAGCCCCCTCCCACTTATACCTATTTTAATAAACATGTGTTTCTGGACAAGGTGAATTAATCGCTGCCATACTT
AATGAATTGAATTTGTAAAA

Downstream 100 bases:

>100_bases
TCATCTTTACAGAGTCTTTGACCAGTGGCAATCAGATTAAGTCAACACCAATTCATTGTATATATAAAAATTATATTCTT
AAACCATGATTGTTATCGTA

Product: ThiJ/PfpI family intracellular protease

Products: NA

Alternate protein names: Intracellular protease I [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MECIMPTSKKILMIVGDFNEDLEVYFPYQAMLMNNYLIDTVSPGKNKGDFIQTAVHDLDKPHLQSYTEKLGHLFPITADF
SKITLKDYDALIIPGGRAAEYQRLNKDILAIIRHFHDADKPIACICHGIQILAEAGILEDKKCTTVGFCEPDVRKAGGHF
IDTGMDGVVVDGKLVTGATWLGNAPWMRAFLHILQNEG

Sequences:

>Translated_198_residues
MECIMPTSKKILMIVGDFNEDLEVYFPYQAMLMNNYLIDTVSPGKNKGDFIQTAVHDLDKPHLQSYTEKLGHLFPITADF
SKITLKDYDALIIPGGRAAEYQRLNKDILAIIRHFHDADKPIACICHGIQILAEAGILEDKKCTTVGFCEPDVRKAGGHF
IDTGMDGVVVDGKLVTGATWLGNAPWMRAFLHILQNEG
>Mature_198_residues
MECIMPTSKKILMIVGDFNEDLEVYFPYQAMLMNNYLIDTVSPGKNKGDFIQTAVHDLDKPHLQSYTEKLGHLFPITADF
SKITLKDYDALIIPGGRAAEYQRLNKDILAIIRHFHDADKPIACICHGIQILAEAGILEDKKCTTVGFCEPDVRKAGGHF
IDTGMDGVVVDGKLVTGATWLGNAPWMRAFLHILQNEG

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=188, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22036; Mature: 22036

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECIMPTSKKILMIVGDFNEDLEVYFPYQAMLMNNYLIDTVSPGKNKGDFIQTAVHDLDK
CCCCCCCCCEEEEEEECCCCCCEEEECHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCC
PHLQSYTEKLGHLFPITADFSKITLKDYDALIIPGGRAAEYQRLNKDILAIIRHFHDADK
HHHHHHHHHHCCEECEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
PIACICHGIQILAEAGILEDKKCTTVGFCEPDVRKAGGHFIDTGMDGVVVDGKLVTGATW
CHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHCCCEEEECCCCCEEECCEEEECEEE
LGNAPWMRAFLHILQNEG
CCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MECIMPTSKKILMIVGDFNEDLEVYFPYQAMLMNNYLIDTVSPGKNKGDFIQTAVHDLDK
CCCCCCCCCEEEEEEECCCCCCEEEECHHHHHHCCEEEECCCCCCCCCHHHHHHHHHCCC
PHLQSYTEKLGHLFPITADFSKITLKDYDALIIPGGRAAEYQRLNKDILAIIRHFHDADK
HHHHHHHHHHCCEECEECCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC
PIACICHGIQILAEAGILEDKKCTTVGFCEPDVRKAGGHFIDTGMDGVVVDGKLVTGATW
CHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHCCCEEEECCCCCEEECCEEEECEEE
LGNAPWMRAFLHILQNEG
CCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA