| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
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The map label for this gene is yoaA [H]
Identifier: 52842140
GI number: 52842140
Start: 2144181
End: 2146181
Strand: Reverse
Name: yoaA [H]
Synonym: lpg1922
Alternate gene names: 52842140
Gene position: 2146181-2144181 (Counterclockwise)
Preceding gene: 52842141
Following gene: 52842139
Centisome position: 63.16
GC content: 40.23
Gene sequence:
>2001_bases TTGGGAAGAAGTAAAGGACAAACTTCAATATTTGCAAAAAGAGTGGAAGAAATAACCACTTTCGCTGAAACCTGTCGGCG AACTCTCAGTGAGAAGGGAAGACTATCCACTGCTATTCCAGGCTTTGTGGCAAGAGCACCACAAGCCGATTTGGCAGTGG CTATAGCCAATGCTATTGTTCAGCGATCGATTTTGGTAGCTGAGGCAGGAACAGGAACAGGTAAGACCTTTGCTTATTTA TTGCCTTGTTTGTTAAGTGGTAAAAAAGCGCTTATCTCAACAGCAACCAAAACGCTCCAAGATCAACTTTTTCAAAAAGA TTTGCCAACCTTGATTAGAGCTTTAGGTTTATCGGTACGAATCCAGAATTTAAAGGGGCGTTCCAATTATATTTGTCAAT ATCGAGTTGAGAAGCATGCTGAGGAAGGACAATTTCAAAGCCCCCAATGCGCTCACGAAATACTCCATGTCAGAGATAAA TTGTCTCAAATGCAAGAAGGCGTTCGCTCGGAATTACCTGAAATTAATGAAGACTCCTCAGTATGGCATTATGTCACATC CACTACCGATAACTGTCTTGGTGCAGAATGTCCGAATCATGAAACCTGTTTTTTAGTGAAAGCACGTAAGCGAGCGATGG AGGCAGATATTGTCGTTATCAATCACCATCTTTTTTTTGCTGATTCTCAGTTAAAAAAAGATGGTTTTAGCGAACTATTA CCTGGTGTTGATGTCGTAGTGTTTGACGAAGCTCATCAGCTTGCAGACATCGCCTCTAATTTCAATGGGGAGCGCCTGGG AACACGTCAATTCAAAGACTTGGTTGATGATATGCTTAATGAGTGGCCAATCCTGGATTTAGCCAATCAACCTCTAAAGT CTATAAGTCATAAAGCGGACAAACTGGTGGATCAATTGCTCAATGCTTTGCCGACTCGTGAGGAACGAATCAGTTGGGAT TTGGTTAAACGAAATAAGGAGTTTATGGAGGCGTGGAATACCTGGTTATCTTTAAAGGATGAGTTGATACAATGCCTGGA ATCAAAGGATACTGCTGATATTCCCGGGTTAAAAAGATGTAAAGAGCGCCTTTTGGATTTGGAAACGGTCTTGCTTTCTT TCACTGAGGAAAATAATCATAAAATTCGCTGGATAGAACGTTTTAAACATACTCTTGTTTTTCATGCCACCCCGTATGAT GTAGCTGAATCATTTAGTCAATTATTAAAAGACCAATCATGTGCCTATATTTTTACATCAGCTACACTGACTATGGCATC GGTTTTTGATAGTTTTTGTAAACCTCTGGGATTAGATAAAGTACAAACTTTGTTATTATCCAGTCCATTTGATTATCAGC AACAGGCTCTGCTTTATTTGCCTCGAGGAATACCCGATCCTAAAGATGCTCATTATTATGAAGCTTTGCTGGAAAAGGCT TTGCCAGTTATAGAAGCTTGCGGTGGCCGTTGCTTTTTCCTTTTTACCAGTCATAAAGCAGTAAAATTGGTTGCTCAAAT GATGAGCAATACTTTAAAATATCCGCTTTTGATTCAAGGTGATGAAGCAAAACCCATTCTCCTGTCTCGATTCAGGCAAT TGGGCAATGCTGTGCTTTTAGGCACTTCTACTTTTTGGGAAGGTGTTGATGTAAAAGGGGAGGCGCTTTCTTGCGTGATT ATAGATAAATTACCCTTTGCTAACCCCGTTGATCCTGTAATTCGTGGCAGAATGTCTTATTTAAAGAAAAAAGGGCTTTC CGGTTTTGATGAATTATCCTTGCCAAATGCTGTCATTGCATTAAAACAGGGAGTAGGGCGATTGATTCGTGACATCACCG ATAAAGGTATATTAATGATAGCGGATCCACGTTTGACTGGTAGAGAGTATGGTCGAACCATTTTGGCAAGTTTACCTGGT CTTCCGAAAACTCGGGATGAAGAAAAAGTACTGCATTTTATTAAAGAGTTGGCTTTAAATGATGAAACTGTTAGCGATTG A
Upstream 100 bases:
>100_bases TAACAGAGGAACAACAGCAATTCAAAGAATTAAATGCCGAGTTATCCAAAACCTGGCCTAATATTACTGCTAAAAAGGAC GCTCCCTCTGATGCCAAGGA
Downstream 100 bases:
>100_bases TACCTCAACTGAACTGGCCAGTGTTGCCATCCTTATAGGTGACGAAATCATAAGCAGGGAGCAGGATAGTCAAAGAATCC ATGCCCAATTGATTTTACCT
Product: DEAD-box ATP dependent DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MGRSKGQTSIFAKRVEEITTFAETCRRTLSEKGRLSTAIPGFVARAPQADLAVAIANAIVQRSILVAEAGTGTGKTFAYL LPCLLSGKKALISTATKTLQDQLFQKDLPTLIRALGLSVRIQNLKGRSNYICQYRVEKHAEEGQFQSPQCAHEILHVRDK LSQMQEGVRSELPEINEDSSVWHYVTSTTDNCLGAECPNHETCFLVKARKRAMEADIVVINHHLFFADSQLKKDGFSELL PGVDVVVFDEAHQLADIASNFNGERLGTRQFKDLVDDMLNEWPILDLANQPLKSISHKADKLVDQLLNALPTREERISWD LVKRNKEFMEAWNTWLSLKDELIQCLESKDTADIPGLKRCKERLLDLETVLLSFTEENNHKIRWIERFKHTLVFHATPYD VAESFSQLLKDQSCAYIFTSATLTMASVFDSFCKPLGLDKVQTLLLSSPFDYQQQALLYLPRGIPDPKDAHYYEALLEKA LPVIEACGGRCFFLFTSHKAVKLVAQMMSNTLKYPLLIQGDEAKPILLSRFRQLGNAVLLGTSTFWEGVDVKGEALSCVI IDKLPFANPVDPVIRGRMSYLKKKGLSGFDELSLPNAVIALKQGVGRLIRDITDKGILMIADPRLTGREYGRTILASLPG LPKTRDEEKVLHFIKELALNDETVSD
Sequences:
>Translated_666_residues MGRSKGQTSIFAKRVEEITTFAETCRRTLSEKGRLSTAIPGFVARAPQADLAVAIANAIVQRSILVAEAGTGTGKTFAYL LPCLLSGKKALISTATKTLQDQLFQKDLPTLIRALGLSVRIQNLKGRSNYICQYRVEKHAEEGQFQSPQCAHEILHVRDK LSQMQEGVRSELPEINEDSSVWHYVTSTTDNCLGAECPNHETCFLVKARKRAMEADIVVINHHLFFADSQLKKDGFSELL PGVDVVVFDEAHQLADIASNFNGERLGTRQFKDLVDDMLNEWPILDLANQPLKSISHKADKLVDQLLNALPTREERISWD LVKRNKEFMEAWNTWLSLKDELIQCLESKDTADIPGLKRCKERLLDLETVLLSFTEENNHKIRWIERFKHTLVFHATPYD VAESFSQLLKDQSCAYIFTSATLTMASVFDSFCKPLGLDKVQTLLLSSPFDYQQQALLYLPRGIPDPKDAHYYEALLEKA LPVIEACGGRCFFLFTSHKAVKLVAQMMSNTLKYPLLIQGDEAKPILLSRFRQLGNAVLLGTSTFWEGVDVKGEALSCVI IDKLPFANPVDPVIRGRMSYLKKKGLSGFDELSLPNAVIALKQGVGRLIRDITDKGILMIADPRLTGREYGRTILASLPG LPKTRDEEKVLHFIKELALNDETVSD >Mature_665_residues GRSKGQTSIFAKRVEEITTFAETCRRTLSEKGRLSTAIPGFVARAPQADLAVAIANAIVQRSILVAEAGTGTGKTFAYLL PCLLSGKKALISTATKTLQDQLFQKDLPTLIRALGLSVRIQNLKGRSNYICQYRVEKHAEEGQFQSPQCAHEILHVRDKL SQMQEGVRSELPEINEDSSVWHYVTSTTDNCLGAECPNHETCFLVKARKRAMEADIVVINHHLFFADSQLKKDGFSELLP GVDVVVFDEAHQLADIASNFNGERLGTRQFKDLVDDMLNEWPILDLANQPLKSISHKADKLVDQLLNALPTREERISWDL VKRNKEFMEAWNTWLSLKDELIQCLESKDTADIPGLKRCKERLLDLETVLLSFTEENNHKIRWIERFKHTLVFHATPYDV AESFSQLLKDQSCAYIFTSATLTMASVFDSFCKPLGLDKVQTLLLSSPFDYQQQALLYLPRGIPDPKDAHYYEALLEKAL PVIEACGGRCFFLFTSHKAVKLVAQMMSNTLKYPLLIQGDEAKPILLSRFRQLGNAVLLGTSTFWEGVDVKGEALSCVII DKLPFANPVDPVIRGRMSYLKKKGLSGFDELSLPNAVIALKQGVGRLIRDITDKGILMIADPRLTGREYGRTILASLPGL PKTRDEEKVLHFIKELALNDETVSD
Specific function: Unknown
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase ATP-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=634, Percent_Identity=43.217665615142, Blast_Score=488, Evalue=1e-139, Organism=Escherichia coli, GI1787018, Length=270, Percent_Identity=32.2222222222222, Blast_Score=99, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR010614 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR006935 [H]
Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 74682; Mature: 74551
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSKGQTSIFAKRVEEITTFAETCRRTLSEKGRLSTAIPGFVARAPQADLAVAIANAIV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHH QRSILVAEAGTGTGKTFAYLLPCLLSGKKALISTATKTLQDQLFQKDLPTLIRALGLSVR HHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IQNLKGRSNYICQYRVEKHAEEGQFQSPQCAHEILHVRDKLSQMQEGVRSELPEINEDSS EECCCCCCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VWHYVTSTTDNCLGAECPNHETCFLVKARKRAMEADIVVINHHLFFADSQLKKDGFSELL EEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHCCEEEEEEEEEECCCHHHHCCHHHHC PGVDVVVFDEAHQLADIASNFNGERLGTRQFKDLVDDMLNEWPILDLANQPLKSISHKAD CCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH KLVDQLLNALPTREERISWDLVKRNKEFMEAWNTWLSLKDELIQCLESKDTADIPGLKRC HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KERLLDLETVLLSFTEENNHKIRWIERFKHTLVFHATPYDVAESFSQLLKDQSCAYIFTS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCEEEEHH ATLTMASVFDSFCKPLGLDKVQTLLLSSPFDYQQQALLYLPRGIPDPKDAHYYEALLEKA HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LPVIEACGGRCFFLFTSHKAVKLVAQMMSNTLKYPLLIQGDEAKPILLSRFRQLGNAVLL HHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCEEEE GTSTFWEGVDVKGEALSCVIIDKLPFANPVDPVIRGRMSYLKKKGLSGFDELSLPNAVIA ECCHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHH LKQGVGRLIRDITDKGILMIADPRLTGREYGRTILASLPGLPKTRDEEKVLHFIKELALN HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC DETVSD CCCCCC >Mature Secondary Structure GRSKGQTSIFAKRVEEITTFAETCRRTLSEKGRLSTAIPGFVARAPQADLAVAIANAIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHH QRSILVAEAGTGTGKTFAYLLPCLLSGKKALISTATKTLQDQLFQKDLPTLIRALGLSVR HHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IQNLKGRSNYICQYRVEKHAEEGQFQSPQCAHEILHVRDKLSQMQEGVRSELPEINEDSS EECCCCCCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VWHYVTSTTDNCLGAECPNHETCFLVKARKRAMEADIVVINHHLFFADSQLKKDGFSELL EEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHCCEEEEEEEEEECCCHHHHCCHHHHC PGVDVVVFDEAHQLADIASNFNGERLGTRQFKDLVDDMLNEWPILDLANQPLKSISHKAD CCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH KLVDQLLNALPTREERISWDLVKRNKEFMEAWNTWLSLKDELIQCLESKDTADIPGLKRC HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KERLLDLETVLLSFTEENNHKIRWIERFKHTLVFHATPYDVAESFSQLLKDQSCAYIFTS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCEEEEHH ATLTMASVFDSFCKPLGLDKVQTLLLSSPFDYQQQALLYLPRGIPDPKDAHYYEALLEKA HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LPVIEACGGRCFFLFTSHKAVKLVAQMMSNTLKYPLLIQGDEAKPILLSRFRQLGNAVLL HHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCEEEE GTSTFWEGVDVKGEALSCVIIDKLPFANPVDPVIRGRMSYLKKKGLSGFDELSLPNAVIA ECCHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHH LKQGVGRLIRDITDKGILMIADPRLTGREYGRTILASLPGLPKTRDEEKVLHFIKELALN HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC DETVSD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]