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The map label for this gene is ychJ

Identifier: 52842114

GI number: 52842114

Start: 2114494

End: 2114973

Strand: Direct

Name: ychJ

Synonym: lpg1896

Alternate gene names: 52842114

Gene position: 2114494-2114973 (Clockwise)

Preceding gene: 52842113

Following gene: 52842115

Centisome position: 62.23

GC content: 37.29

Gene sequence:

>480_bases
ATGACTCTTTGCCCCTGTGGTTCACAAAATAAATATGAGCAATGTTGCGGGATTTATCTGGAAAGCAAGAAAACTCCTGA
AACACCAGAACAATTAATGCGTTCGAGATATACTGCGTATTCTCTTGCAAAAATCGATTATATTAAACAGACCATGCAAG
GCAAACCACTAATTGCTTTCAACGAATCAGAAGCAAAGCAATGGGCTCAAAATGTTTCCTGGCTGGGTTTGAAAATCATT
CAAAGCTACATGGAGAGGCCAGATAAAGGATTTGTTGAATTTATAGCAACCTTTCTTGATGGAAATCAATTGAAAAGTAT
TCATGAATTAAGTGAGTTTCAAAAGGATAATTCCGTTTGGTTTTATGTGGATGGGGAGGCTAAACAGTTACCAAACAAAC
AAGACAAGCAAAAGATAGGCCGCAATAGCCCATGTCCCTGTGGAAGCGGTAAAAAATTTAAAAACTGTCATGATAAATGA

Upstream 100 bases:

>100_bases
CTGTTTAGAAATAATGGAATGCCATATAGAATATAATCCGGGATTCGTTAATATAACGGATTGTAAATTTACCCATAAAC
CAGTTTTTACAGGTAACTAA

Downstream 100 bases:

>100_bases
ATTAAACTCAAGGTAGCAGATGAACGGTCACTTACTCCTCAATGTTTTCATTTTCCTTGCTGCTGCAAGCATCATGGTTC
CACTGGCAAGCCGATTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAFNESEAKQWAQNVSWLGLKII
QSYMERPDKGFVEFIATFLDGNQLKSIHELSEFQKDNSVWFYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK

Sequences:

>Translated_159_residues
MTLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAFNESEAKQWAQNVSWLGLKII
QSYMERPDKGFVEFIATFLDGNQLKSIHELSEFQKDNSVWFYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK
>Mature_158_residues
TLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAFNESEAKQWAQNVSWLGLKIIQ
SYMERPDKGFVEFIATFLDGNQLKSIHELSEFQKDNSVWFYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=155, Percent_Identity=40.6451612903226, Blast_Score=122, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18291; Mature: 18160

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAF
CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NESEAKQWAQNVSWLGLKIIQSYMERPDKGFVEFIATFLDGNQLKSIHELSEFQKDNSVW
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
FYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK
EEECCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAF
CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NESEAKQWAQNVSWLGLKIIQSYMERPDKGFVEFIATFLDGNQLKSIHELSEFQKDNSVW
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
FYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK
EEECCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA