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The map label for this gene is yybO [H]

Identifier: 52842111

GI number: 52842111

Start: 2110585

End: 2111865

Strand: Reverse

Name: yybO [H]

Synonym: lpg1893

Alternate gene names: 52842111

Gene position: 2111865-2110585 (Counterclockwise)

Preceding gene: 52842122

Following gene: 52842108

Centisome position: 62.15

GC content: 40.44

Gene sequence:

>1281_bases
GTGAACACATTGTCATTCAAGCATCCATTGCTGGCTAAAACTTATCTTTGGATTATCTGGACCATCGCGGCATGTTTTTT
CTTTTATAAATATTTGATTCAGGTTTCTCCCAGTGTCATGACAGCTGACTTGATGAAGGCATTTCAGGTTAATGCTGCTG
GCCTTGGGAATTTGTCAGCTTTTTATTTTTATTCCTATTTATTTATGCAGATTCCTGTGGGCGTTATGTTAGACAGGTAC
AGCCCAAGATTGCTAACAACTCTTGCTATTTTTGTCTGCAGTATCAGTACTTATATTTTTTCTCAAACCAATACTTTATG
GTTGGCCTGTTTAAGTCGAGCATTGATGGGGGCGGGAGCTGCTTTTGCTGCCGTGTCTTGTTTTAAGCTAGCCGCTGTCT
GGTTTTCTCCAAAACGATTTGCTCTAGTATCAGGGATGTTTATGACAGCAGCTATGCTGGGTGCTGTGGGAGGGCAGATG
CCTTTGGCATTTTTGGTTCAACATGAAGGTTGGCGCAAGGCGCTTGAATTAGTAAGCGTGATGGGGATTATCCTGGGGGT
CGTGTATTTTCTCATTTTAAGAGATAAGCCTGCACAAACGCAGCCTATGCCAAATAGCAAGGAACCTGTTATTCAATTGT
TAAGACGTATTATCGTTAATAAGCAGGCCTGGGCTTTGTCTTTATATAGTGGATTAGCATTTGCTCCTGTTTCGGTTTTT
GGTGGATTATGGGGAGTTCCTTTTTTGGAAAAGGCCTATCTCTTATCTCGTACTGATGCAGCCCTTGCGATTTCATTTAT
TTTTGTCGGTTTTGCGGCAGGCGCGCCATTTTGGGGATGGTTTTCTGATTTTATCAGGCGGAGAAAGCCTGTTTTGTTTA
CAGGAACGTGTTCTGCTCTATTGTGTTTATTGGTAGTTATTTATAGCTCAAACCAAAATTTGCTTACTTTAATTATTCTT
TTATTTCTCTTTGGTTTTGGAGCGAGTGGATTTTTTACCAGCTTTGCAATGATCAGGGAATTATTTCCTTTGGTACTTGT
AGCGACAGTACTTGGTATTATGAATACGTTTAATTCGGTGTTTGAGGCTTTGTTTGAGCCACTGGTTGGTGCTTTGCTGG
ATTGGACATGGGAGGGGACCATGGTGGATGGTATTCATCAATTTACTTTACACGGGTACTATTTTTCTCTTTTATTGTTG
CCTCTGTCTTTAATTTTAGCCTTATTGACCTTGTTATTGATTGATGAAACATATTGTCGAACAAAGGAGGAGGTAGAGTA
A

Upstream 100 bases:

>100_bases
GACTTATCTGCCCCGCCTCAGGGCGATAACAGCAGCAGATAAGACCTGGCGGTTTTTGAAATTTTATCTCTAACCTGAAG
CAAATAAGTTAGGAGTTATT

Downstream 100 bases:

>100_bases
ACCTCCCCATTATTGATTGCAGGTTATTTTTTGAGGCAGAAAACCATATGGGCCTTTTGCGTTTGGATTAAAAATCACAG
TACATCCTTTTGTTTTTTGA

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNTLSFKHPLLAKTYLWIIWTIAACFFFYKYLIQVSPSVMTADLMKAFQVNAAGLGNLSAFYFYSYLFMQIPVGVMLDRY
SPRLLTTLAIFVCSISTYIFSQTNTLWLACLSRALMGAGAAFAAVSCFKLAAVWFSPKRFALVSGMFMTAAMLGAVGGQM
PLAFLVQHEGWRKALELVSVMGIILGVVYFLILRDKPAQTQPMPNSKEPVIQLLRRIIVNKQAWALSLYSGLAFAPVSVF
GGLWGVPFLEKAYLLSRTDAALAISFIFVGFAAGAPFWGWFSDFIRRRKPVLFTGTCSALLCLLVVIYSSNQNLLTLIIL
LFLFGFGASGFFTSFAMIRELFPLVLVATVLGIMNTFNSVFEALFEPLVGALLDWTWEGTMVDGIHQFTLHGYYFSLLLL
PLSLILALLTLLLIDETYCRTKEEVE

Sequences:

>Translated_426_residues
MNTLSFKHPLLAKTYLWIIWTIAACFFFYKYLIQVSPSVMTADLMKAFQVNAAGLGNLSAFYFYSYLFMQIPVGVMLDRY
SPRLLTTLAIFVCSISTYIFSQTNTLWLACLSRALMGAGAAFAAVSCFKLAAVWFSPKRFALVSGMFMTAAMLGAVGGQM
PLAFLVQHEGWRKALELVSVMGIILGVVYFLILRDKPAQTQPMPNSKEPVIQLLRRIIVNKQAWALSLYSGLAFAPVSVF
GGLWGVPFLEKAYLLSRTDAALAISFIFVGFAAGAPFWGWFSDFIRRRKPVLFTGTCSALLCLLVVIYSSNQNLLTLIIL
LFLFGFGASGFFTSFAMIRELFPLVLVATVLGIMNTFNSVFEALFEPLVGALLDWTWEGTMVDGIHQFTLHGYYFSLLLL
PLSLILALLTLLLIDETYCRTKEEVE
>Mature_426_residues
MNTLSFKHPLLAKTYLWIIWTIAACFFFYKYLIQVSPSVMTADLMKAFQVNAAGLGNLSAFYFYSYLFMQIPVGVMLDRY
SPRLLTTLAIFVCSISTYIFSQTNTLWLACLSRALMGAGAAFAAVSCFKLAAVWFSPKRFALVSGMFMTAAMLGAVGGQM
PLAFLVQHEGWRKALELVSVMGIILGVVYFLILRDKPAQTQPMPNSKEPVIQLLRRIIVNKQAWALSLYSGLAFAPVSVF
GGLWGVPFLEKAYLLSRTDAALAISFIFVGFAAGAPFWGWFSDFIRRRKPVLFTGTCSALLCLLVVIYSSNQNLLTLIIL
LFLFGFGASGFFTSFAMIRELFPLVLVATVLGIMNTFNSVFEALFEPLVGALLDWTWEGTMVDGIHQFTLHGYYFSLLLL
PLSLILALLTLLLIDETYCRTKEEVE

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI2367379, Length=384, Percent_Identity=25.5208333333333, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47461; Mature: 47461

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHCCC
>Mature Secondary Structure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CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]