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The map label for this gene is yqhA [C]

Identifier: 52842101

GI number: 52842101

Start: 2101695

End: 2102222

Strand: Direct

Name: yqhA [C]

Synonym: lpg1883

Alternate gene names: 52842101

Gene position: 2101695-2102222 (Clockwise)

Preceding gene: 52842098

Following gene: 52842102

Centisome position: 61.86

GC content: 39.39

Gene sequence:

>528_bases
ATGAATCGAATCAAACTTGGCATCAGTAATCTTATTTTTATGGGAAGATGGCTTCAACTTCCCTTGTATCTCGGTTTGAT
CTTGATACTGGCCGGATATGTGTATCGCTTCATCATTGAATTATTTGAACTCATTTTTCATCTTAAAGGCCTGGATGATA
CCCATATCATGCTTGGAGTATTGGACCTCATTGACGTCGTCATGATTGCTAATCTTTTGATTATGGTAGTTATGGGCGGC
TATGAAACCTTTGTATCCCATTTGCAATTGGATTCCCACCCTGATCAACCTGAATGGCTTGACCATTTTGATGCAGGAGC
TATGAAAATCAAATTGGCTCTTTCACTGATAGGTATCTCCTCGATTCATCTGTTAAGAACTTTTATAGACCCTGCAAAAC
TTAGCAATTATTCTATTATGTGGCAGGTTGTGATTCATTTAACTTTAATTGTTTCAGCCTTGGCCATTGCATTAACCAAT
CGGTTGATGGATCAGCCCGCCAGGAAAAACCTCCAACACCCTGATTGA

Upstream 100 bases:

>100_bases
ATATTATACATAGTATGAGTATAATAAGTATTAACAAAACCTTCAGGAAAGCTTATCATAAGACCATTCAATAAGTTATA
TTTTGTAGTGAATCGACAAA

Downstream 100 bases:

>100_bases
TTTAAAAATCTGAAAATTAAATAACCTCTTTCTCTGATGTCACTCACTCTGCACATGACAAAACCTGTTATGTTCAGAGT
CCCGCCCTAAAAAAATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MNRIKLGISNLIFMGRWLQLPLYLGLILILAGYVYRFIIELFELIFHLKGLDDTHIMLGVLDLIDVVMIANLLIMVVMGG
YETFVSHLQLDSHPDQPEWLDHFDAGAMKIKLALSLIGISSIHLLRTFIDPAKLSNYSIMWQVVIHLTLIVSALAIALTN
RLMDQPARKNLQHPD

Sequences:

>Translated_175_residues
MNRIKLGISNLIFMGRWLQLPLYLGLILILAGYVYRFIIELFELIFHLKGLDDTHIMLGVLDLIDVVMIANLLIMVVMGG
YETFVSHLQLDSHPDQPEWLDHFDAGAMKIKLALSLIGISSIHLLRTFIDPAKLSNYSIMWQVVIHLTLIVSALAIALTN
RLMDQPARKNLQHPD
>Mature_175_residues
MNRIKLGISNLIFMGRWLQLPLYLGLILILAGYVYRFIIELFELIFHLKGLDDTHIMLGVLDLIDVVMIANLLIMVVMGG
YETFVSHLQLDSHPDQPEWLDHFDAGAMKIKLALSLIGISSIHLLRTFIDPAKLSNYSIMWQVVIHLTLIVSALAIALTN
RLMDQPARKNLQHPD

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=155, Percent_Identity=36.1290322580645, Blast_Score=113, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 19898; Mature: 19898

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIKLGISNLIFMGRWLQLPLYLGLILILAGYVYRFIIELFELIFHLKGLDDTHIMLGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDLIDVVMIANLLIMVVMGGYETFVSHLQLDSHPDQPEWLDHFDAGAMKIKLALSLIGIS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
SIHLLRTFIDPAKLSNYSIMWQVVIHLTLIVSALAIALTNRLMDQPARKNLQHPD
HHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
>Mature Secondary Structure
MNRIKLGISNLIFMGRWLQLPLYLGLILILAGYVYRFIIELFELIFHLKGLDDTHIMLGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LDLIDVVMIANLLIMVVMGGYETFVSHLQLDSHPDQPEWLDHFDAGAMKIKLALSLIGIS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
SIHLLRTFIDPAKLSNYSIMWQVVIHLTLIVSALAIALTNRLMDQPARKNLQHPD
HHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]