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The map label for this gene is yghD

Identifier: 52842096

GI number: 52842096

Start: 2096467

End: 2096937

Strand: Direct

Name: yghD

Synonym: lpg1875

Alternate gene names: 52842096

Gene position: 2096467-2096937 (Clockwise)

Preceding gene: 52842095

Following gene: 52842098

Centisome position: 61.7

GC content: 35.67

Gene sequence:

>471_bases
GTGAAAACCTATTTAAACACGCTGAATGATCGAGAAAAGTGGATGGTTATAGTAGCTGGTGTATCACTTTTTATTTATGG
CTACTATTTATTACTTTACACCCCGCTGAGCAACCAGGTAAATCAAAAATCCACTCAATTAATTGAAAAAACTGAAACAT
TGGAATGGATGAAGCAAGTAAGAATGCAAAAACGCTCTGCCAAAAGAAAGGAATCTGTAGATAACAGCCAATTGTTAACT
ATTCTTGCTTCCCAACTTAAAAATAATAAAACACTCAAATTCCCCTATCAATTACAACAAACAGGCTCGGGGGATGTTCA
ATTAACCTTTGACGCAGTCCCTTTTCAAAACTTTATACAATGGCTTGCAAAAATCAACGAAGTCTATTCTATCAATATAA
AACAATTTGATGTGGAGAAAACCTCAACACCGGGAGTAACCCGACTGATGATCATACTCTCTACAAGTTAG

Upstream 100 bases:

>100_bases
TACAAAAAATTGAAAATAAACTAAAACAATCACAACTCAAAGTGAAACAAACTCAAGCCTCAACGAAAGATCAACAAGTA
GTTGCAACTCTGGAGTTAAC

Downstream 100 bases:

>100_bases
AATTGCTATTATGTATTAGTCAAGACTATAAGCCTGACCTTAGAATAATAAAATACGGAATATCAAAGTATTTTTTTTAA
ATACATATAGTTTCTCAAGA

Product: putative general secretion pathway protein M-type YghD

Products: NA

Alternate protein names: General Secretion Pathway Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKTYLNTLNDREKWMVIVAGVSLFIYGYYLLLYTPLSNQVNQKSTQLIEKTETLEWMKQVRMQKRSAKRKESVDNSQLLT
ILASQLKNNKTLKFPYQLQQTGSGDVQLTFDAVPFQNFIQWLAKINEVYSINIKQFDVEKTSTPGVTRLMIILSTS

Sequences:

>Translated_156_residues
MKTYLNTLNDREKWMVIVAGVSLFIYGYYLLLYTPLSNQVNQKSTQLIEKTETLEWMKQVRMQKRSAKRKESVDNSQLLT
ILASQLKNNKTLKFPYQLQQTGSGDVQLTFDAVPFQNFIQWLAKINEVYSINIKQFDVEKTSTPGVTRLMIILSTS
>Mature_156_residues
MKTYLNTLNDREKWMVIVAGVSLFIYGYYLLLYTPLSNQVNQKSTQLIEKTETLEWMKQVRMQKRSAKRKESVDNSQLLT
ILASQLKNNKTLKFPYQLQQTGSGDVQLTFDAVPFQNFIQWLAKINEVYSINIKQFDVEKTSTPGVTRLMIILSTS

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG3149

COG function: function code U; Type II secretory pathway, component PulM

Gene ontology:

Cell location: Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18109; Mature: 18109

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTYLNTLNDREKWMVIVAGVSLFIYGYYLLLYTPLSNQVNQKSTQLIEKTETLEWMKQV
CCCHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RMQKRSAKRKESVDNSQLLTILASQLKNNKTLKFPYQLQQTGSGDVQLTFDAVPFQNFIQ
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCEEEEEECCCHHHHHH
WLAKINEVYSINIKQFDVEKTSTPGVTRLMIILSTS
HHHHHHHHHEECEEEEECCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKTYLNTLNDREKWMVIVAGVSLFIYGYYLLLYTPLSNQVNQKSTQLIEKTETLEWMKQV
CCCHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RMQKRSAKRKESVDNSQLLTILASQLKNNKTLKFPYQLQQTGSGDVQLTFDAVPFQNFIQ
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCHHCCCCCCCCEEEEEECCCHHHHHH
WLAKINEVYSINIKQFDVEKTSTPGVTRLMIILSTS
HHHHHHHHHEECEEEEECCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA