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The map label for this gene is glyQ

Identifier: 52842067

GI number: 52842067

Start: 2061582

End: 2062505

Strand: Reverse

Name: glyQ

Synonym: lpg1840

Alternate gene names: 52842067

Gene position: 2062505-2061582 (Counterclockwise)

Preceding gene: 52842068

Following gene: 52842066

Centisome position: 60.7

GC content: 40.48

Gene sequence:

>924_bases
TTGTTTTTTGAGATTTTCATGACTAAACCTACTACTTTTCAGGAAATTATACTGACCTTGCAAAAATATTGGTCAGATCT
TGGTTGTGTTATTTTGCAACCTTTGGATCTGGAAGTTGGCGCGGGTACCTTTCATCCAGCTACTTTTTTAAGAGCGATTG
GACCTGAGCCATGGTCAGCAGCTTATGTTCAGCCATCCAGAAGGCCGACGGACGGTCGTTATGGAGAAAATCCAAACCGG
GTTCAGCATTATTATCAATTTCAGGTGGTATTAAAACCGTCGCCATTGGATATACAAGACCGATACTTGGATTCGTTACG
CGCACTTGGAGTAGATCCCTTATTGGATGATATCCGTTTTGTCGAAGACAATTGGGAATCACCAACTCTAGGCGCATGGG
GCTTAGGTTGGGAGGTTTGGCAAAATGGAATGGAGGTGTCTCAGTTTACTTATTTTCAACAAGTGGGCGGACTTGTATGT
AAACCAATCACTGGTGAATTAACCTATGGTTTGGAACGTATCGCAATGTTTGTTTTAGGGGTAGATAACTTATTTGATTT
GCCTTGGTGTAAAACGGCTAATGGCATAGTGACATATGGGGATGTATTCCATCAAAATGAAGTAGAGATGTCAGCTTATA
ATTTTGAACATGCCAATGTTGAAGAATTATTTAAGCAATTTGATTATTATGAAGGAGAGGCACAAAAATTGATAGCTTTG
CAATTACCTCTTCCTGCTTACGAAATGGTCATAAAAGCTTCTCACACTTTTAACTTACTGGATGCACGTAAAGCAATTTC
TGTGACAGAGCGGCAAAGGTATATATTACGTGTAAGACATCTATCAAGAGCAGTAGCTCAAGCTTACTATCAAGCGCGCG
AGGCGTTAGGTTTCCCTATGCAAAAGGTGTGTAATGGTCAATGA

Upstream 100 bases:

>100_bases
TTATTGGACTGAATAATTAATTCTCTAAATGAAAGATAGGTTTTGTGGGATATATCCTGGATATAAGGATTAAAAACCAA
CCTATATTTAAAGATCATAT

Downstream 100 bases:

>100_bases
TTTTATTTTTGAATTAGGATGTGAAGAGCTGCCTTCTGGTGCTGTTTGGCCTTTGGCAAATGAGTTTTCTACTCGATTGT
TAGCCGCATTAGATAAGGCG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MFFEIFMTKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSAAYVQPSRRPTDGRYGENPNR
VQHYYQFQVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRFVEDNWESPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVC
KPITGELTYGLERIAMFVLGVDNLFDLPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIAL
QLPLPAYEMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPMQKVCNGQ

Sequences:

>Translated_307_residues
MFFEIFMTKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSAAYVQPSRRPTDGRYGENPNR
VQHYYQFQVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRFVEDNWESPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVC
KPITGELTYGLERIAMFVLGVDNLFDLPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIAL
QLPLPAYEMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPMQKVCNGQ
>Mature_307_residues
MFFEIFMTKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSAAYVQPSRRPTDGRYGENPNR
VQHYYQFQVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRFVEDNWESPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVC
KPITGELTYGLERIAMFVLGVDNLFDLPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIAL
QLPLPAYEMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPMQKVCNGQ

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=296, Percent_Identity=72.6351351351351, Blast_Score=455, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 35273; Mature: 35273

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFEIFMTKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSA
CEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCHHHHHHHHCCCCCCC
AYVQPSRRPTDGRYGENPNRVQHYYQFQVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRF
CEECCCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH
VEDNWESPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVCKPITGELTYGLERIAMFVLG
HHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHC
VDNLFDLPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIAL
CCHHCCCCCCCCCCCEEEECHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEE
QLPLPAYEMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPM
ECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QKVCNGQ
HHHCCCC
>Mature Secondary Structure
MFFEIFMTKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSA
CEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCHHHHHHHHCCCCCCC
AYVQPSRRPTDGRYGENPNRVQHYYQFQVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRF
CEECCCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH
VEDNWESPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVCKPITGELTYGLERIAMFVLG
HHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHC
VDNLFDLPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIAL
CCHHCCCCCCCCCCCEEEECHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEE
QLPLPAYEMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPM
ECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QKVCNGQ
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA