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The map label for this gene is garP [C]

Identifier: 52842043

GI number: 52842043

Start: 2033353

End: 2034642

Strand: Direct

Name: garP [C]

Synonym: lpg1816

Alternate gene names: 52842043

Gene position: 2033353-2034642 (Clockwise)

Preceding gene: 52842041

Following gene: 52842051

Centisome position: 59.84

GC content: 38.14

Gene sequence:

>1290_bases
TTGCAGATTATAAATTTACACAAACATAACAATGCTATATATTCCATCAATTTCAACATAATACAAACTACTTTGAACAA
TTTATCGGCTATTAAGAAATCAAAAATCACCATTTGGTTGGTAGGAGTATTTTTTTTATTATTCCAATTCTTCTTGCAAC
TATCCTCGGGGATCATTGTAGGCGCAATAATGCACGAAGAACATATTTCCGCACTCAGCGCAGGACTTTTAAGTAGCGCC
TTTTACTATGTCTATACTTCTTTTCAAATTCCTGTCGGGATTCTTTTTGATCGCTACAATACCCGATATTTGTTATCGGT
CAATGCAACTCTTTGTGCCATCGGATGTTTTGTATTTGCCTCGGGACATAACCTCCCGACTCTTTTCCTTGGGCGGTTAA
TTATTGGCGCTGGCTCAGCCTTTGCCTTTATTGGTTTAAGCCATTTGTTACGCCAACATTTTCCCTTAAAACAATACGCT
TTTATGATAGGCCTATCAGAAACGTTGGGATTTACTGTTACAGTATTAGGAATGATTGGCATGGGTTCTGTGATCAGCCA
TTTTGGATGGCGTTATTTTATTAACATAGCAGGAATCATTGGATTCCTGATCGCCAGTTTATGCTGGTTGTGTATCCCCA
ATAGCAAGCCAGTCGTTTCTTTTCCACATCAATATAAACAACAAATTATCCCCATTCTAAAAAATAAATTAGCCTGGTTT
AATGGCCTTTTTGTTTGTCTGGAATTCTCAGTCATTACTGTCTTTGCCGCCATGTGGGCTGTTCCTTTTTTACAATTAAA
ACTGGATTGCACTATCAAAACAGCCAGTATACTAACTTCAATGGTCTTACTGGGTGCTGGCTTAAGCTGTCCTTTATTGG
GTCAAATTTCGGTACATCTCAATAGACGAAAACCGCTGATTCATGCTTCTTGTCTGTCAACTGCGTTATTATTAATACTT
GTTTTATATTTACCAACTCAAAATAAGCTATTGATAGGTATTTTAATGTTTTCTATGGGGTTAACCTGTGGTGCTTATAT
GCTAGCCTATTCAATTTCTAATGAATTGGCCCCACCTGAATTCTTGTCCACTTGTACTGGCTTCACCAATACCTTGGCAA
TGCTCTCGGCTCCCTTACTTCAACCACTCGTTGGATTTTTTTTAGATGTACTCAGTAACCATAAAAGCCAATACAGCCTG
GCTGACTACCAACTGGCCCTTTTGATTGTTCCTTTTGCCATGCTATTGGCAAGCTTATTTACTTGCCTCCTGCCAGAAAA
ATCAAATTAG

Upstream 100 bases:

>100_bases
ATCTGCAGTATAGAAATCATTTTTCAAATTTTACAAAATACATACAGAATTATTGATTCCAATGTAATAGCAAATATAAT
TCATGAAGAAATAAAAGGTA

Downstream 100 bases:

>100_bases
ACTATCCCAAATTAGTAACCGCTTGTACTGCTGACTCCTTGATTTGCTTAAAAGTTTGTTTGGATATAAAACAAAATCCT
TTTGGATTTTCTTCAGAAAA

Product: major facilitator family transporter

Products: NA

Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Permease; Sugar Phosphate Permease; Transporter MFS Superfamily; Sugar Transporter; Facilitator Protein; Facilitator Family Transporter Transporter; Facilitator Superfamily Sugar Transporter; MFS Transporter; Permease; Facilitator Membrane Proteins; Transporter Facilitator Family; Facilitator Family Oxalate/Formate Antiporter; Facilitator Family Hexuronate Transporter; Intraphagosomal Amino Acid Transporter Family Protein; Sugar Transport Family Protein; Permease Of Facilitator Superfamily; Transmembrane Transporter; Transporter Facilitator Family Protein; Facilitator Superfamily Protein Permease; Transport Proteins; MFS Family Transporter; Multidrug ABC Transporter; Facilitator Family Protein; NasA Protein; Facilitator Superfamily Transporter Transporter; MFS Superfamily Transporter

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MQIINLHKHNNAIYSINFNIIQTTLNNLSAIKKSKITIWLVGVFFLLFQFFLQLSSGIIVGAIMHEEHISALSAGLLSSA
FYYVYTSFQIPVGILFDRYNTRYLLSVNATLCAIGCFVFASGHNLPTLFLGRLIIGAGSAFAFIGLSHLLRQHFPLKQYA
FMIGLSETLGFTVTVLGMIGMGSVISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPVVSFPHQYKQQIIPILKNKLAWF
NGLFVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHLNRRKPLIHASCLSTALLLIL
VLYLPTQNKLLIGILMFSMGLTCGAYMLAYSISNELAPPEFLSTCTGFTNTLAMLSAPLLQPLVGFFLDVLSNHKSQYSL
ADYQLALLIVPFAMLLASLFTCLLPEKSN

Sequences:

>Translated_429_residues
MQIINLHKHNNAIYSINFNIIQTTLNNLSAIKKSKITIWLVGVFFLLFQFFLQLSSGIIVGAIMHEEHISALSAGLLSSA
FYYVYTSFQIPVGILFDRYNTRYLLSVNATLCAIGCFVFASGHNLPTLFLGRLIIGAGSAFAFIGLSHLLRQHFPLKQYA
FMIGLSETLGFTVTVLGMIGMGSVISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPVVSFPHQYKQQIIPILKNKLAWF
NGLFVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHLNRRKPLIHASCLSTALLLIL
VLYLPTQNKLLIGILMFSMGLTCGAYMLAYSISNELAPPEFLSTCTGFTNTLAMLSAPLLQPLVGFFLDVLSNHKSQYSL
ADYQLALLIVPFAMLLASLFTCLLPEKSN
>Mature_429_residues
MQIINLHKHNNAIYSINFNIIQTTLNNLSAIKKSKITIWLVGVFFLLFQFFLQLSSGIIVGAIMHEEHISALSAGLLSSA
FYYVYTSFQIPVGILFDRYNTRYLLSVNATLCAIGCFVFASGHNLPTLFLGRLIIGAGSAFAFIGLSHLLRQHFPLKQYA
FMIGLSETLGFTVTVLGMIGMGSVISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPVVSFPHQYKQQIIPILKNKLAWF
NGLFVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHLNRRKPLIHASCLSTALLLIL
VLYLPTQNKLLIGILMFSMGLTCGAYMLAYSISNELAPPEFLSTCTGFTNTLAMLSAPLLQPLVGFFLDVLSNHKSQYSL
ADYQLALLIVPFAMLLASLFTCLLPEKSN

Specific function: Uptake Of D-Galactarate. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47321; Mature: 47321

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIINLHKHNNAIYSINFNIIQTTLNNLSAIKKSKITIWLVGVFFLLFQFFLQLSSGIIV
CCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEE
GAIMHEEHISALSAGLLSSAFYYVYTSFQIPVGILFDRYNTRYLLSVNATLCAIGCFVFA
EEHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCEEEEEECHHHHHHHHHHHC
SGHNLPTLFLGRLIIGAGSAFAFIGLSHLLRQHFPLKQYAFMIGLSETLGFTVTVLGMIG
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MGSVISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPVVSFPHQYKQQIIPILKNKLAWF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHH
NGLFVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHCCCCCCCEEEHEEEEE
NRRKPLIHASCLSTALLLILVLYLPTQNKLLIGILMFSMGLTCGAYMLAYSISNELAPPE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FLSTCTGFTNTLAMLSAPLLQPLVGFFLDVLSNHKSQYSLADYQLALLIVPFAMLLASLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TCLLPEKSN
HHHCCCCCC
>Mature Secondary Structure
MQIINLHKHNNAIYSINFNIIQTTLNNLSAIKKSKITIWLVGVFFLLFQFFLQLSSGIIV
CCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEE
GAIMHEEHISALSAGLLSSAFYYVYTSFQIPVGILFDRYNTRYLLSVNATLCAIGCFVFA
EEHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCEEEEEECHHHHHHHHHHHC
SGHNLPTLFLGRLIIGAGSAFAFIGLSHLLRQHFPLKQYAFMIGLSETLGFTVTVLGMIG
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MGSVISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPVVSFPHQYKQQIIPILKNKLAWF
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHH
NGLFVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHCCCCCCCEEEHEEEEE
NRRKPLIHASCLSTALLLILVLYLPTQNKLLIGILMFSMGLTCGAYMLAYSISNELAPPE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FLSTCTGFTNTLAMLSAPLLQPLVGFFLDVLSNHKSQYSLADYQLALLIVPFAMLLASLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TCLLPEKSN
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA