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The map label for this gene is motC

Identifier: 52842008

GI number: 52842008

Start: 1988899

End: 1989672

Strand: Reverse

Name: motC

Synonym: lpg1781

Alternate gene names: 52842008

Gene position: 1989672-1988899 (Counterclockwise)

Preceding gene: 161723249

Following gene: 52842007

Centisome position: 58.56

GC content: 41.09

Gene sequence:

>774_bases
ATGGATACTTTGACTTTAATAGGATTGTTGACAGGTTTTCTCGCCATTATCGTAGGCCAAATTTTTGAGGGGGGAGATTT
AAATTCCTTACTTAATTTTCCGGCCTTACTGATTGTCATGGGTGGAACATTAGGGGCTGTTATGGTGCAAACTCCTTTAA
CCACTTTTAAAAGGGCGTTTAGAATATTGCCTTGGGTAGTGAAACCTCCTCATCATAATTTTGAAGAATGCAGAACGACT
CTCATAGAGTTATCTAGAAAAGCTCGCCAACTTGGCCTTCTCTCCCTAGAAGATCGTTTGGATGTCGAAACCAATCCTTT
AATTTATAAGGGGTTGGAATTACTGGTTACAGGAGTGGACAAGCTTACCTTACGACAAGTTTTGGAAGCAGAAATAGATC
GAACGGAGCATCAGGATTTGCGTGCTGCGCATGTCTTTGAAAGCATGGGCGGCTATAGCCCCACCATAGGAATTTTAGGT
GCGGTGTTGGGTTTAATTCAAGTCATGAGGAATCTCGCTGATCCCAGTCAATTAGGTTTAGGCATTGCGGTTGCTTTTGT
TGCAACTATTTATGGTGTTGGGTTCGCGAATCTGTTTTTTTTACCTGTTGCTAATAAATTAAAAAGTTGTATTTCTCATA
AGGTGCATTTTGATGAAATGGTCGTTGAAGGCCTGGTCGCCATGGCGAGTGGTGAGAGTCCCAATATGCTGCAGTTAAAG
TTAAACAACTATGGGCAACACAAGCAAGATGAAATCAAAACAAAAGAAAACTGA

Upstream 100 bases:

>100_bases
AATCGGGGAAATACTGGAGGTTAGTGAGTCACGAATTTCACAGATTTTAAGTCAAGCAACGCACCGTATTAGATCAAGAT
TACCGGAATAAAAAATAAGT

Downstream 100 bases:

>100_bases
AGAACATCAGGATAGTCATCGATGGGTCGTATCTTATGCTGATTTCATTACCTTATTATTTGCTTTTTTTGTTGTGATGT
ATGCTATTTCTTCAGTAAAT

Product: flagellar motor protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDTLTLIGLLTGFLAIIVGQIFEGGDLNSLLNFPALLIVMGGTLGAVMVQTPLTTFKRAFRILPWVVKPPHHNFEECRTT
LIELSRKARQLGLLSLEDRLDVETNPLIYKGLELLVTGVDKLTLRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTIGILG
AVLGLIQVMRNLADPSQLGLGIAVAFVATIYGVGFANLFFLPVANKLKSCISHKVHFDEMVVEGLVAMASGESPNMLQLK
LNNYGQHKQDEIKTKEN

Sequences:

>Translated_257_residues
MDTLTLIGLLTGFLAIIVGQIFEGGDLNSLLNFPALLIVMGGTLGAVMVQTPLTTFKRAFRILPWVVKPPHHNFEECRTT
LIELSRKARQLGLLSLEDRLDVETNPLIYKGLELLVTGVDKLTLRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTIGILG
AVLGLIQVMRNLADPSQLGLGIAVAFVATIYGVGFANLFFLPVANKLKSCISHKVHFDEMVVEGLVAMASGESPNMLQLK
LNNYGQHKQDEIKTKEN
>Mature_257_residues
MDTLTLIGLLTGFLAIIVGQIFEGGDLNSLLNFPALLIVMGGTLGAVMVQTPLTTFKRAFRILPWVVKPPHHNFEECRTT
LIELSRKARQLGLLSLEDRLDVETNPLIYKGLELLVTGVDKLTLRQVLEAEIDRTEHQDLRAAHVFESMGGYSPTIGILG
AVLGLIQVMRNLADPSQLGLGIAVAFVATIYGVGFANLFFLPVANKLKSCISHKVHFDEMVVEGLVAMASGESPNMLQLK
LNNYGQHKQDEIKTKEN

Specific function: May be involved in some transport function [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

Organism=Escherichia coli, GI1788199, Length=256, Percent_Identity=24.609375, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 28205; Mature: 28205

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCCCCCHHHCCCCCC
>Mature Secondary Structure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ECCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]