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The map label for this gene is ugpA

Identifier: 52841958

GI number: 52841958

Start: 1930486

End: 1931364

Strand: Reverse

Name: ugpA

Synonym: lpg1731

Alternate gene names: 52841958

Gene position: 1931364-1930486 (Counterclockwise)

Preceding gene: 52841960

Following gene: 52841957

Centisome position: 56.84

GC content: 36.29

Gene sequence:

>879_bases
ATGTCTAAATTTAATCATCAGCGTTTGTTTGCCTGGCTATTTATAGTCCCTCAGCTAATTGTCACTATTATTTTTTTTAT
TTGGCCTGCTTGCAGCGCATTATTGCAATCCTTTTTTTATACTGACGCATTTGGTTTGCATAAGAATTTTGCCGGATTGA
CCAATTTTTTTGACTTATTCCTTGATCCCGGTTATGCAAAAGCCATATGGGTTACTTTTATAATTGCGATTAGTGTGACG
CTTATCACTATGAGTTTAGGTCTTTTAATGGCTACTTTAATAAATTACAGAGGAAAAAGCCAAGGAGTTTATAAGACTTT
GTTGATATGGCCTTATGCAATAGCCCCTGCTGTTGCTGCAATACTTTGGCGGTTTTTATGTCATCCAACTTTAGGATGGT
TAACTCAGGTGCTTGAGTATTTGGGAATTCATTTTAATTATGTCAACGACGCGAATCAGGCTTTGCTTGTTGTCATTTTA
ACCGCCAGTTGGCAGCAGTTTAGTTACAATTTTTTATTTTATTTTGCTGCGCTTAAAGCAGTTCCTCAGACATTAATTGA
TGCAGCAATCATGGATGGGGCCAATACATGGCAACGATTCTGGCAAATAATTTTCCCAATCCTGTCGCCCACTACCTTTT
TTCTGTTAATAATGAACCTGATTTATGGTTTTTTTGATACATTTGGAATTATTCAAGTCATGACACACGGAGGTCCTGGT
AATAGCACAACTAATTTAATCTATAAGGTGTATGAAGACGGTTTTGAGGGAATGGATTTGGGAAGTTCATCAGCCCAATC
TGTATTACTGATGCTTATTGTAATTGCAGTTTCCTTGTTACAATTTAAATACCTTGAGAAAAAGGTTCATTACGAATGA

Upstream 100 bases:

>100_bases
TTATATCTTTTACAACTCGCATAATGATTTAAAATCGATATAATTTTATTTTAAACTATTGCGATGATAATTATCATTTT
AACAACTACATGGTTAGTTA

Downstream 100 bases:

>100_bases
GACAATTTAAACGTTTGGGGTCGCATGGGTTAATATTGTTATTTATAGGATTAATGATGGCTCCTTTGTATTTGGCTGTA
GTTGCTGCAAGTCATGAAGG

Product: sn-glycerol-3-phosphate transmembrane ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSKFNHQRLFAWLFIVPQLIVTIIFFIWPACSALLQSFFYTDAFGLHKNFAGLTNFFDLFLDPGYAKAIWVTFIIAISVT
LITMSLGLLMATLINYRGKSQGVYKTLLIWPYAIAPAVAAILWRFLCHPTLGWLTQVLEYLGIHFNYVNDANQALLVVIL
TASWQQFSYNFLFYFAALKAVPQTLIDAAIMDGANTWQRFWQIIFPILSPTTFFLLIMNLIYGFFDTFGIIQVMTHGGPG
NSTTNLIYKVYEDGFEGMDLGSSSAQSVLLMLIVIAVSLLQFKYLEKKVHYE

Sequences:

>Translated_292_residues
MSKFNHQRLFAWLFIVPQLIVTIIFFIWPACSALLQSFFYTDAFGLHKNFAGLTNFFDLFLDPGYAKAIWVTFIIAISVT
LITMSLGLLMATLINYRGKSQGVYKTLLIWPYAIAPAVAAILWRFLCHPTLGWLTQVLEYLGIHFNYVNDANQALLVVIL
TASWQQFSYNFLFYFAALKAVPQTLIDAAIMDGANTWQRFWQIIFPILSPTTFFLLIMNLIYGFFDTFGIIQVMTHGGPG
NSTTNLIYKVYEDGFEGMDLGSSSAQSVLLMLIVIAVSLLQFKYLEKKVHYE
>Mature_291_residues
SKFNHQRLFAWLFIVPQLIVTIIFFIWPACSALLQSFFYTDAFGLHKNFAGLTNFFDLFLDPGYAKAIWVTFIIAISVTL
ITMSLGLLMATLINYRGKSQGVYKTLLIWPYAIAPAVAAILWRFLCHPTLGWLTQVLEYLGIHFNYVNDANQALLVVILT
ASWQQFSYNFLFYFAALKAVPQTLIDAAIMDGANTWQRFWQIIFPILSPTTFFLLIMNLIYGFFDTFGIIQVMTHGGPGN
STTNLIYKVYEDGFEGMDLGSSSAQSVLLMLIVIAVSLLQFKYLEKKVHYE

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=45.993031358885, Blast_Score=259, Evalue=1e-70,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=28.3464566929134, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1787570, Length=266, Percent_Identity=26.6917293233083, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33255; Mature: 33123

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFNHQRLFAWLFIVPQLIVTIIFFIWPACSALLQSFFYTDAFGLHKNFAGLTNFFDLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPGYAKAIWVTFIIAISVTLITMSLGLLMATLINYRGKSQGVYKTLLIWPYAIAPAVAA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ILWRFLCHPTLGWLTQVLEYLGIHFNYVNDANQALLVVILTASWQQFSYNFLFYFAALKA
HHHHHHHCCHHHHHHHHHHHHCCHHEECCCCCCEEEHHEEHHCHHHHHHHHHHHHHHHHH
VPQTLIDAAIMDGANTWQRFWQIIFPILSPTTFFLLIMNLIYGFFDTFGIIQVMTHGGPG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NSTTNLIYKVYEDGFEGMDLGSSSAQSVLLMLIVIAVSLLQFKYLEKKVHYE
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKFNHQRLFAWLFIVPQLIVTIIFFIWPACSALLQSFFYTDAFGLHKNFAGLTNFFDLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPGYAKAIWVTFIIAISVTLITMSLGLLMATLINYRGKSQGVYKTLLIWPYAIAPAVAA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ILWRFLCHPTLGWLTQVLEYLGIHFNYVNDANQALLVVILTASWQQFSYNFLFYFAALKA
HHHHHHHCCHHHHHHHHHHHHCCHHEECCCCCCEEEHHEEHHCHHHHHHHHHHHHHHHHH
VPQTLIDAAIMDGANTWQRFWQIIFPILSPTTFFLLIMNLIYGFFDTFGIIQVMTHGGPG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NSTTNLIYKVYEDGFEGMDLGSSSAQSVLLMLIVIAVSLLQFKYLEKKVHYE
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA