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The map label for this gene is 52841899

Identifier: 52841899

GI number: 52841899

Start: 1857651

End: 1859780

Strand: Direct

Name: 52841899

Synonym: lpg1671

Alternate gene names: NA

Gene position: 1857651-1859780 (Clockwise)

Preceding gene: 52841898

Following gene: 52841911

Centisome position: 54.67

GC content: 35.16

Gene sequence:

>2130_bases
GTGATCGATTCTATGGGATATCATTTTTTAACAGAAGGAAATGGGATTATTGCATGTTATGACATGTACCCAACTCAGTT
TCATTCTATTAAGGACATGATTAATTATTTGCCTGTCTTAAAGCAGATGGGGTTTAATGCCTTATGGATTAATCCCATGC
AAATGCCCGGTGACATTAGCGGCTTTTTTAAAACGGATAAAAATAATGGTGTAAAAACAGGAAATGAGGTCACTAGAAGC
TTATATGCCATGAGTCACCCGTTATTATTTAATCCTCAATTCAGTTTGGGCTCCCCTGAAGACCCCATGGGGACAACCCA
ACGATTAAACTCAGAAGCTTTACAGTTATTCACTCAAAATGCAAGGAACCTCGGAATAGTTCCAATGTTTGATCTGGTTT
TAAATCATGTCGCCATTGATTCTCCCTTGTGTCAGGATAAGCCTCATTGGTTCAAAGGAGTTCATGAAGACTTCAAAGAT
GTTCGCGGCTTCAATTACGATGATGAAAGCATAAGAAAAGAAATAATAACCGAATTTTGGCAACCTTATATCAAACGTTA
CATGATCGAGTACGGTTTTGATGGTGTTCGAGTCGATGCTGTAGGTTATGTACATCCTGCAGTAAGAAGTGAAATATATG
CCTATATTCACTCTCTTGCTGCTGAATATGGTAAACCAAAGCCGGTTATCCTTGATGAAGCTTTATTTAGTAAACGACCA
CTTGCGGATGAAGTAAATTATTTGAAATTACCCGGCATAGGCCCAACTCACATCACTACAGAAGCTTATAATGTTGAATT
TGATCTTGCCAGCGCTGATCTGCCTTATGAAATAACATTGGAAGAGCAGTTAAAGGCGAGTGTAGTCTTCCAACAAAAAG
ATGGAACATGGCGTGAAAACACGAAGGGGGGCTGCATTAATTTTTGTGGGAATCATGACTATCGCTCATTGGCGATGACT
ATTTTATTTCAAATGGCCAAAAAAAGACTGGAATCTGACGCTTTTTATAATGACTTAATGTCTTCCTATCAAGACTTGTA
CTTTAAGTTTAACGCCGAGCAAGAAAAACCACATGAACTCAAGGAGCCTTTGAAAACAACCTTACTTTACTCTTATGTTG
ATCAAATCAAAAAGGAGTTGGAAGATAATAAAGATGAAACAACACAAGAATTTAAAACTCTGGTATTAGAAAAACTGGCT
TTATCCGCTCTTACAGCCAGTGGCGGATGGTTTTTATTATCTGGTGATGAAACATGCGATATCACTGCAAAAACAGTATT
TCAGAGAAAAGGTGCTGTTGATAAATCTTATTACCCACAACGTGAACATCGTATTTTTAGTGAAAAACCAGTTATTGCTC
ACAAAATTTTAGAAAAAATGGCAGAAGAGAATTTCTTCATAGAAAACTCGGAAAATAAGTGGATGCAGGAACTTTACAGA
AGTTTATCAAGTTTTCCTGAAATGCAAAAACGTCTTTTAGTATCTCATATTGATAATATTAAACACCAAATAAATGCCGG
CATAGATCATGTACAAGAAAAATTTTCCAGGCTACTTGCCAGTGAAAATTTAAATATAGGTTTCACATCTCAAGATTTTT
TAGAGAATCCAAGAACCCACGAAAATGGATGGCTTGGATTACAGAATAATTTTCTATTTATCAAACAATTAAATACATTA
TTAAAAAGACTACCTGCATCACTACCCGGATTCTCCAGTGAGTTGGTTCGACTCCCTGAAAAACCGCATCTCATTATTAT
CGTAAGAAAAAATGGTAATGAATTAAATGCTCCAATTGATGTTGTTGTTGTTAACCTTGAACAGGAAAAACGACAAACAT
TAACTAAAGAAGATTTTCAATTAATTGCCAAAAACTATTGTAATCAATATTTTTCTAAAAATAGACCGAGTGTTTGCGAT
AGTTTACGCGAAAAATTATATTCCCATGTTTTAAAATCTGCTGTAAATAATCGAGTCCATACAGACACCAGTATTAAACT
GAATGGAATCCATTTATTTGAGTTTAAAGAAACTTCGTTAAACACTTTTTTTACAATTGAAAAAGAAAAAAACTATTCTC
ATGGAAATGAAGACAATACTGCTTTGACTGGAAATACAATCTCGCATTAG

Upstream 100 bases:

>100_bases
TCTATTTAACGCTATAATAACAAGCGATTCGACTGATAAAAGTGGAGTTGTAACCAACAATTCGATTTTTCTCAGTTTTG
TAGTTTAATAATTTTCTACG

Downstream 100 bases:

>100_bases
AGACCTTTCGATGCAATCAGGTTAATTGCATCTACCAAAGCTATTCCTTCCAACTGCTGCACCCTTGCTTTTAAGGTTTG
AGCAGTATCTCCTTCTAAAA

Product: alpha-amylase, putative

Products: D-glucose; cholesterol

Alternate protein names: Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain Subfamily

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MIDSMGYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDISGFFKTDKNNGVKTGNEVTRS
LYAMSHPLLFNPQFSLGSPEDPMGTTQRLNSEALQLFTQNARNLGIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKD
VRGFNYDDESIRKEIITEFWQPYIKRYMIEYGFDGVRVDAVGYVHPAVRSEIYAYIHSLAAEYGKPKPVILDEALFSKRP
LADEVNYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWRENTKGGCINFCGNHDYRSLAMT
ILFQMAKKRLESDAFYNDLMSSYQDLYFKFNAEQEKPHELKEPLKTTLLYSYVDQIKKELEDNKDETTQEFKTLVLEKLA
LSALTASGGWFLLSGDETCDITAKTVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYR
SLSSFPEMQKRLLVSHIDNIKHQINAGIDHVQEKFSRLLASENLNIGFTSQDFLENPRTHENGWLGLQNNFLFIKQLNTL
LKRLPASLPGFSSELVRLPEKPHLIIIVRKNGNELNAPIDVVVVNLEQEKRQTLTKEDFQLIAKNYCNQYFSKNRPSVCD
SLREKLYSHVLKSAVNNRVHTDTSIKLNGIHLFEFKETSLNTFFTIEKEKNYSHGNEDNTALTGNTISH

Sequences:

>Translated_709_residues
MIDSMGYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDISGFFKTDKNNGVKTGNEVTRS
LYAMSHPLLFNPQFSLGSPEDPMGTTQRLNSEALQLFTQNARNLGIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKD
VRGFNYDDESIRKEIITEFWQPYIKRYMIEYGFDGVRVDAVGYVHPAVRSEIYAYIHSLAAEYGKPKPVILDEALFSKRP
LADEVNYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWRENTKGGCINFCGNHDYRSLAMT
ILFQMAKKRLESDAFYNDLMSSYQDLYFKFNAEQEKPHELKEPLKTTLLYSYVDQIKKELEDNKDETTQEFKTLVLEKLA
LSALTASGGWFLLSGDETCDITAKTVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYR
SLSSFPEMQKRLLVSHIDNIKHQINAGIDHVQEKFSRLLASENLNIGFTSQDFLENPRTHENGWLGLQNNFLFIKQLNTL
LKRLPASLPGFSSELVRLPEKPHLIIIVRKNGNELNAPIDVVVVNLEQEKRQTLTKEDFQLIAKNYCNQYFSKNRPSVCD
SLREKLYSHVLKSAVNNRVHTDTSIKLNGIHLFEFKETSLNTFFTIEKEKNYSHGNEDNTALTGNTISH
>Mature_709_residues
MIDSMGYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDISGFFKTDKNNGVKTGNEVTRS
LYAMSHPLLFNPQFSLGSPEDPMGTTQRLNSEALQLFTQNARNLGIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKD
VRGFNYDDESIRKEIITEFWQPYIKRYMIEYGFDGVRVDAVGYVHPAVRSEIYAYIHSLAAEYGKPKPVILDEALFSKRP
LADEVNYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWRENTKGGCINFCGNHDYRSLAMT
ILFQMAKKRLESDAFYNDLMSSYQDLYFKFNAEQEKPHELKEPLKTTLLYSYVDQIKKELEDNKDETTQEFKTLVLEKLA
LSALTASGGWFLLSGDETCDITAKTVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYR
SLSSFPEMQKRLLVSHIDNIKHQINAGIDHVQEKFSRLLASENLNIGFTSQDFLENPRTHENGWLGLQNNFLFIKQLNTL
LKRLPASLPGFSSELVRLPEKPHLIIIVRKNGNELNAPIDVVVVNLEQEKRQTLTKEDFQLIAKNYCNQYFSKNRPSVCD
SLREKLYSHVLKSAVNNRVHTDTSIKLNGIHLFEFKETSLNTFFTIEKEKNYSHGNEDNTALTGNTISH

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.1

Molecular weight: Translated: 81626; Mature: 81626

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSMGYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDIS
CCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
GFFKTDKNNGVKTGNEVTRSLYAMSHPLLFNPQFSLGSPEDPMGTTQRLNSEALQLFTQN
CCEEECCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
ARNLGIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKDVRGFNYDDESIRKEIITEFW
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QPYIKRYMIEYGFDGVRVDAVGYVHPAVRSEIYAYIHSLAAEYGKPKPVILDEALFSKRP
HHHHHHHHHHHCCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCC
LADEVNYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWREN
CCCCCCEEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEHHHHHCEEEEEEECCCCCCCC
TKGGCINFCGNHDYRSLAMTILFQMAKKRLESDAFYNDLMSSYQDLYFKFNAEQEKPHEL
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHH
KEPLKTTLLYSYVDQIKKELEDNKDETTQEFKTLVLEKLALSALTASGGWFLLSGDETCD
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
ITAKTVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYR
HHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHH
SLSSFPEMQKRLLVSHIDNIKHQINAGIDHVQEKFSRLLASENLNIGFTSQDFLENPRTH
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
ENGWLGLQNNFLFIKQLNTLLKRLPASLPGFSSELVRLPEKPHLIIIVRKNGNELNAPID
CCCEEEECCCEEHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCEE
VVVVNLEQEKRQTLTKEDFQLIAKNYCNQYFSKNRPSVCDSLREKLYSHVLKSAVNNRVH
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
TDTSIKLNGIHLFEFKETSLNTFFTIEKEKNYSHGNEDNTALTGNTISH
CCCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MIDSMGYHFLTEGNGIIACYDMYPTQFHSIKDMINYLPVLKQMGFNALWINPMQMPGDIS
CCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
GFFKTDKNNGVKTGNEVTRSLYAMSHPLLFNPQFSLGSPEDPMGTTQRLNSEALQLFTQN
CCEEECCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
ARNLGIVPMFDLVLNHVAIDSPLCQDKPHWFKGVHEDFKDVRGFNYDDESIRKEIITEFW
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QPYIKRYMIEYGFDGVRVDAVGYVHPAVRSEIYAYIHSLAAEYGKPKPVILDEALFSKRP
HHHHHHHHHHHCCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCC
LADEVNYLKLPGIGPTHITTEAYNVEFDLASADLPYEITLEEQLKASVVFQQKDGTWREN
CCCCCCEEECCCCCCCCEEEEEEEEEEEEECCCCCEEEEHHHHHCEEEEEEECCCCCCCC
TKGGCINFCGNHDYRSLAMTILFQMAKKRLESDAFYNDLMSSYQDLYFKFNAEQEKPHEL
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHH
KEPLKTTLLYSYVDQIKKELEDNKDETTQEFKTLVLEKLALSALTASGGWFLLSGDETCD
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
ITAKTVFQRKGAVDKSYYPQREHRIFSEKPVIAHKILEKMAEENFFIENSENKWMQELYR
HHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHH
SLSSFPEMQKRLLVSHIDNIKHQINAGIDHVQEKFSRLLASENLNIGFTSQDFLENPRTH
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
ENGWLGLQNNFLFIKQLNTLLKRLPASLPGFSSELVRLPEKPHLIIIVRKNGNELNAPID
CCCEEEECCCEEHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCEE
VVVVNLEQEKRQTLTKEDFQLIAKNYCNQYFSKNRPSVCDSLREKLYSHVLKSAVNNRVH
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
TDTSIKLNGIHLFEFKETSLNTFFTIEKEKNYSHGNEDNTALTGNTISH
CCCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; cholesteryl-beta-D-glucoside

Specific reaction: H2O + cholesteryl-beta-D-glucoside = D-glucose + cholesterol

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA