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The map label for this gene is 52841897

Identifier: 52841897

GI number: 52841897

Start: 1854141

End: 1856366

Strand: Reverse

Name: 52841897

Synonym: lpg1669

Alternate gene names: NA

Gene position: 1856366-1854141 (Counterclockwise)

Preceding gene: 52841900

Following gene: 52841896

Centisome position: 54.64

GC content: 37.74

Gene sequence:

>2226_bases
ATGGCAGAATCAAAATTAGAGATAGTCAATAAAACAGAACGTGAAGAAAGTGTAATCCTGGATGGTAATGGGATTTTACG
CTGTTATAACATGTTTCCTACTCAATTTGGAAGCATAGAGGAAATGATTGACTATCTTCCTCAATTACAGGCCATGGGAT
TTAATGCTGTATGGATAAATCCTGTACAAACAGCAGGGGATGTTCAGGGTTTATTTAAGCGTGATAAGACAATTGGCGTC
AGAGCTTATAATGAGGTGACAAGAAGTCTATATGCTATGACAGATTGTGATTTGATAAGTCCTTATTTTAACCCGCTCCC
TCCCAATGTTGATCCTAAGTTGAAAAAGCAGCTGGATATGGAAGCAATGCAGAAGTTCACATCAGAAGCCCGCAATAATG
GTTTGGTACCGATGTTTGATTTGGTTTTAAATCACGTTGCCGCCGATTCACGGCATAGAAAAGAACATCCTGAATGGTTT
CAAAAGGATGTCCATCCTGATTTTAAGGATGCTATCGCGTTTGACTACAGTGACCCTCAAATCCGAGATGAAATTATTGA
ACAATTTTGGAAGCCTTATATTTATAAGTACATGATTGATTATGGCTTTGAGGGTGTTCGCATTGATGCTGTAGGCTATT
TAAATCCAGAATTACGCAAACAAATTTATGCTTATATTTATGATCTTGCAGAGCAGTTTAATAAACCTAAACCCGTTATA
TTGGATGAACTTCTTTTCAGTGGGAGTCAGAAGCTTACCGATGTGGTTGATGGTTTGTTGCTTCCAGAAAAAGGGCCAAC
CCATATTACTCGCGGTACCTATTATGCGCAAAGAGATGGTTATGGTGGTTTACCCGGATGGTGTAAGGAGGAGGAGGGAG
TTAAGGCTCAAGTAGTATTCCTGGATAAACAAAAGAAATTGCATCCCCATGCCAAAGGCGGATGTATTGCTTTCTCCGGT
AATCATGATCATAACTCCTTAGCCATGACAATATTGGAAGAAATGGCAGAACATCGTTTGGCAAATCATCACACTTTGCA
CGGTGCGCAAGAAAAATTTAAACATGAAAGGAGCTATGATTATGACGAAGCTTTAGAGTCAGTCCTGCGCTATTCTTTTG
TGAAAGATATTCAAAATGAGATTCTAAGCGGTAATGAATCAACAATCAAAGAAGTAGAAACAAGAATGCGTGAAAAAATA
GCTTTCTGTGCTTTAACATCAAGCGGCGGGTGGTATGCTCTATCAGGTGATGAAACAGGTGATTTATTGGCAAAACCTGT
ATTCAGAAGGGTTCACGCTCTGGACCAAACCTATTATGCACAACGTACTCATATAATCTTTGATAAAAAATATCCCGACA
ACAAAGTAGCTATGGAGGTATTAACCGAAATGGCTATAGAGAATATCCAAAAAGAAAAAGCTGGAAGCATCTATAACAGT
TTACAGCATGATAAACAATCGCAAGAGCGATTGCTCGTTCCTTATCTGGAGACTTTGCAAAATCAAATTAATTGTGGCGA
TACAGTTGTTTGCAAAGCATTCCAAGAAAAACTCGCCCAGAAAAATATAACGATTGGTTTTACAGACGAAAATTATAGTC
CGGATCCCAGAACACCTCAAAATGGTTGGAACGGCCAACATGATATGAGGAAATTTATGTTTGAAATCAATAGTATATTA
AGTTCCTTGCCGAGTTCCAATATGGGGTTTTGGAGTGAAGTTATCCCAATCCAGTCAAAACCAGGGTTGCTTGCAGTAGT
ACGTAAAAATGGGCTAGGCTTAAGTTCTGATACTGATATTGCGATCGTTAATATGGATCCAAGTCAAAAAGTCGAGTTAA
CCAGAGACGATATTCATCAATTAGCCTGTAATTTCCAGAAACGAGTAATTCCTGAATATACTTATTACAATGATGGTAAA
GACAAACAGTATAATTGGCATACAAATAATCCTGATTTTAATATGGCTTATCATACAGTGATGTCGTGTATCGAAGCCAA
AAGGATACATGTTGATGATTCGATTAAAACTAATTTCCCTGTTCATTCAGCAAATCCCTATGGCATGTTTAGCAAAAAGC
AATCATCGAAAATGAATATAGCCAAGATAGCAAAAATGTCTGGGGAAGATACCACTTTAATTGAAAAAGGTACTAATGAT
ACTGAGGGTATCATACACGATGATGAGCAAATTCAACCCACTATAACTGTAGAAAACAAAAAATAA

Upstream 100 bases:

>100_bases
TATACAACAGCTATGTTTGCTTGCTTTTTAAGCTCAAGAGGCATAATCCTGAGATATGTACTATATTTTATCTAAAAGAT
AATGATATGGGCATATTATT

Downstream 100 bases:

>100_bases
AGAAGTACTGTAATAAAAGTGGTTTCAACTTGGTGACAGGATATTATTTTGATAAATCGGATACTCTGCAATATAACTAA
TTACAAAGACCGTATAAATA

Product: alpha-amylase, putative

Products: D-glucose; cholesterol

Alternate protein names: Alpha-Amylase; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain Family; Alpha Amylase Family Protein; Glycosidase; Alpha Amylase Catalytic Domain Subfamily

Number of amino acids: Translated: 741; Mature: 740

Protein sequence:

>741_residues
MAESKLEIVNKTEREESVILDGNGILRCYNMFPTQFGSIEEMIDYLPQLQAMGFNAVWINPVQTAGDVQGLFKRDKTIGV
RAYNEVTRSLYAMTDCDLISPYFNPLPPNVDPKLKKQLDMEAMQKFTSEARNNGLVPMFDLVLNHVAADSRHRKEHPEWF
QKDVHPDFKDAIAFDYSDPQIRDEIIEQFWKPYIYKYMIDYGFEGVRIDAVGYLNPELRKQIYAYIYDLAEQFNKPKPVI
LDELLFSGSQKLTDVVDGLLLPEKGPTHITRGTYYAQRDGYGGLPGWCKEEEGVKAQVVFLDKQKKLHPHAKGGCIAFSG
NHDHNSLAMTILEEMAEHRLANHHTLHGAQEKFKHERSYDYDEALESVLRYSFVKDIQNEILSGNESTIKEVETRMREKI
AFCALTSSGGWYALSGDETGDLLAKPVFRRVHALDQTYYAQRTHIIFDKKYPDNKVAMEVLTEMAIENIQKEKAGSIYNS
LQHDKQSQERLLVPYLETLQNQINCGDTVVCKAFQEKLAQKNITIGFTDENYSPDPRTPQNGWNGQHDMRKFMFEINSIL
SSLPSSNMGFWSEVIPIQSKPGLLAVVRKNGLGLSSDTDIAIVNMDPSQKVELTRDDIHQLACNFQKRVIPEYTYYNDGK
DKQYNWHTNNPDFNMAYHTVMSCIEAKRIHVDDSIKTNFPVHSANPYGMFSKKQSSKMNIAKIAKMSGEDTTLIEKGTND
TEGIIHDDEQIQPTITVENKK

Sequences:

>Translated_741_residues
MAESKLEIVNKTEREESVILDGNGILRCYNMFPTQFGSIEEMIDYLPQLQAMGFNAVWINPVQTAGDVQGLFKRDKTIGV
RAYNEVTRSLYAMTDCDLISPYFNPLPPNVDPKLKKQLDMEAMQKFTSEARNNGLVPMFDLVLNHVAADSRHRKEHPEWF
QKDVHPDFKDAIAFDYSDPQIRDEIIEQFWKPYIYKYMIDYGFEGVRIDAVGYLNPELRKQIYAYIYDLAEQFNKPKPVI
LDELLFSGSQKLTDVVDGLLLPEKGPTHITRGTYYAQRDGYGGLPGWCKEEEGVKAQVVFLDKQKKLHPHAKGGCIAFSG
NHDHNSLAMTILEEMAEHRLANHHTLHGAQEKFKHERSYDYDEALESVLRYSFVKDIQNEILSGNESTIKEVETRMREKI
AFCALTSSGGWYALSGDETGDLLAKPVFRRVHALDQTYYAQRTHIIFDKKYPDNKVAMEVLTEMAIENIQKEKAGSIYNS
LQHDKQSQERLLVPYLETLQNQINCGDTVVCKAFQEKLAQKNITIGFTDENYSPDPRTPQNGWNGQHDMRKFMFEINSIL
SSLPSSNMGFWSEVIPIQSKPGLLAVVRKNGLGLSSDTDIAIVNMDPSQKVELTRDDIHQLACNFQKRVIPEYTYYNDGK
DKQYNWHTNNPDFNMAYHTVMSCIEAKRIHVDDSIKTNFPVHSANPYGMFSKKQSSKMNIAKIAKMSGEDTTLIEKGTND
TEGIIHDDEQIQPTITVENKK
>Mature_740_residues
AESKLEIVNKTEREESVILDGNGILRCYNMFPTQFGSIEEMIDYLPQLQAMGFNAVWINPVQTAGDVQGLFKRDKTIGVR
AYNEVTRSLYAMTDCDLISPYFNPLPPNVDPKLKKQLDMEAMQKFTSEARNNGLVPMFDLVLNHVAADSRHRKEHPEWFQ
KDVHPDFKDAIAFDYSDPQIRDEIIEQFWKPYIYKYMIDYGFEGVRIDAVGYLNPELRKQIYAYIYDLAEQFNKPKPVIL
DELLFSGSQKLTDVVDGLLLPEKGPTHITRGTYYAQRDGYGGLPGWCKEEEGVKAQVVFLDKQKKLHPHAKGGCIAFSGN
HDHNSLAMTILEEMAEHRLANHHTLHGAQEKFKHERSYDYDEALESVLRYSFVKDIQNEILSGNESTIKEVETRMREKIA
FCALTSSGGWYALSGDETGDLLAKPVFRRVHALDQTYYAQRTHIIFDKKYPDNKVAMEVLTEMAIENIQKEKAGSIYNSL
QHDKQSQERLLVPYLETLQNQINCGDTVVCKAFQEKLAQKNITIGFTDENYSPDPRTPQNGWNGQHDMRKFMFEINSILS
SLPSSNMGFWSEVIPIQSKPGLLAVVRKNGLGLSSDTDIAIVNMDPSQKVELTRDDIHQLACNFQKRVIPEYTYYNDGKD
KQYNWHTNNPDFNMAYHTVMSCIEAKRIHVDDSIKTNFPVHSANPYGMFSKKQSSKMNIAKIAKMSGEDTTLIEKGTNDT
EGIIHDDEQIQPTITVENKK

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.1

Molecular weight: Translated: 84766; Mature: 84635

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESKLEIVNKTEREESVILDGNGILRCYNMFPTQFGSIEEMIDYLPQLQAMGFNAVWIN
CCCCHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
PVQTAGDVQGLFKRDKTIGVRAYNEVTRSLYAMTDCDLISPYFNPLPPNVDPKLKKQLDM
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHCH
EAMQKFTSEARNNGLVPMFDLVLNHVAADSRHRKEHPEWFQKDVHPDFKDAIAFDYSDPQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCHHHHEEECCCCHH
IRDEIIEQFWKPYIYKYMIDYGFEGVRIDAVGYLNPELRKQIYAYIYDLAEQFNKPKPVI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHH
LDELLFSGSQKLTDVVDGLLLPEKGPTHITRGTYYAQRDGYGGLPGWCKEEEGVKAQVVF
HHHHHHCCCHHHHHHHCCCCCCCCCCCCEECCEEEEECCCCCCCCCCCCCCCCCEEEEEE
LDKQKKLHPHAKGGCIAFSGNHDHNSLAMTILEEMAEHRLANHHTLHGAQEKFKHERSYD
EECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
YDEALESVLRYSFVKDIQNEILSGNESTIKEVETRMREKIAFCALTSSGGWYALSGDETG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCCC
DLLAKPVFRRVHALDQTYYAQRTHIIFDKKYPDNKVAMEVLTEMAIENIQKEKAGSIYNS
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQHDKQSQERLLVPYLETLQNQINCGDTVVCKAFQEKLAQKNITIGFTDENYSPDPRTPQ
HHHHHHHHHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
NGWNGQHDMRKFMFEINSILSSLPSSNMGFWSEVIPIQSKPGLLAVVRKNGLGLSSDTDI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCCCE
AIVNMDPSQKVELTRDDIHQLACNFQKRVIPEYTYYNDGKDKQYNWHTNNPDFNMAYHTV
EEEECCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
MSCIEAKRIHVDDSIKTNFPVHSANPYGMFSKKQSSKMNIAKIAKMSGEDTTLIEKGTND
HHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCC
TEGIIHDDEQIQPTITVENKK
CCCCEECCCCCCCEEEECCCC
>Mature Secondary Structure 
AESKLEIVNKTEREESVILDGNGILRCYNMFPTQFGSIEEMIDYLPQLQAMGFNAVWIN
CCCHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
PVQTAGDVQGLFKRDKTIGVRAYNEVTRSLYAMTDCDLISPYFNPLPPNVDPKLKKQLDM
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHCH
EAMQKFTSEARNNGLVPMFDLVLNHVAADSRHRKEHPEWFQKDVHPDFKDAIAFDYSDPQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCHHHHEEECCCCHH
IRDEIIEQFWKPYIYKYMIDYGFEGVRIDAVGYLNPELRKQIYAYIYDLAEQFNKPKPVI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHH
LDELLFSGSQKLTDVVDGLLLPEKGPTHITRGTYYAQRDGYGGLPGWCKEEEGVKAQVVF
HHHHHHCCCHHHHHHHCCCCCCCCCCCCEECCEEEEECCCCCCCCCCCCCCCCCEEEEEE
LDKQKKLHPHAKGGCIAFSGNHDHNSLAMTILEEMAEHRLANHHTLHGAQEKFKHERSYD
EECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
YDEALESVLRYSFVKDIQNEILSGNESTIKEVETRMREKIAFCALTSSGGWYALSGDETG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCCC
DLLAKPVFRRVHALDQTYYAQRTHIIFDKKYPDNKVAMEVLTEMAIENIQKEKAGSIYNS
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQHDKQSQERLLVPYLETLQNQINCGDTVVCKAFQEKLAQKNITIGFTDENYSPDPRTPQ
HHHHHHHHHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
NGWNGQHDMRKFMFEINSILSSLPSSNMGFWSEVIPIQSKPGLLAVVRKNGLGLSSDTDI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCCCE
AIVNMDPSQKVELTRDDIHQLACNFQKRVIPEYTYYNDGKDKQYNWHTNNPDFNMAYHTV
EEEECCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
MSCIEAKRIHVDDSIKTNFPVHSANPYGMFSKKQSSKMNIAKIAKMSGEDTTLIEKGTND
HHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCC
TEGIIHDDEQIQPTITVENKK
CCCCEECCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; cholesteryl-beta-D-glucoside

Specific reaction: H2O + cholesteryl-beta-D-glucoside = D-glucose + cholesterol

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA