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The map label for this gene is 52841873

Identifier: 52841873

GI number: 52841873

Start: 1819383

End: 1819958

Strand: Reverse

Name: 52841873

Synonym: lpg1645

Alternate gene names: NA

Gene position: 1819958-1819383 (Counterclockwise)

Preceding gene: 52841874

Following gene: 52841872

Centisome position: 53.56

GC content: 38.19

Gene sequence:

>576_bases
GTGAATGTCTATATTAAATCTTCCCTTTGGGTATTGATATTTTTTGTGAATACATTGATTTACGCCAGTAAACTCCCTGA
ATGGGAAATCGTGCCAGCACAAAGTGAGATTACTTTTACTGGTACTCAAAATGGTGCCCCGGTTACAGGGCGATTTAAGA
AATTTACTGGTCAAATTTTTGCTGATCCTTCAAACTACAAGACAGGGTCAATTGATATCACTATTGATATGAATTCGATT
GCAGCACCTTTTGAGGACATCGTAACGACATTGGCCTCCCCTGACTGGTTCAACGTCAAGACATTTCCTAATGCAGAATT
TAAAGCTTCGAAATTTAATCAATTGGATGATAAAACCTATGAAGCAGAAGGGATTCTAACTATAAGAGATAAATCAGCTC
CGGTTACTCTGAAGTTTGTTGTGGAGCAAATTTCTAACGATCAGGCTTTAGTTGAAGGTAGCTCAACAATCAAACGCAGT
ACATTTGGGGTAGGACAAGGTGAATGGGCTAGTACTGATGAAATACAGGATGCAGTAATTGTTCGCTTTAAAATAAGCGC
TACACGGAAAAAATAA

Upstream 100 bases:

>100_bases
GGTTGGGTTATGCATTAATTATGGCCATAATCCTGCATGCAGCGGCGGCATTAAAACATCATTTTATTAATAAGGATGAT
ATATTACGGAGAATGTTATA

Downstream 100 bases:

>100_bases
TTTAAAGGTTAACATGCAAGCAATAATATGTAGAGGAATGTTAAATAATTTTAATTATTTCAAATTTTAAGAAACTACAT
GGCATCATGCATTGGCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome B; YceI Like Family; Ycei Family Protein; Signal Peptide Protein; Cytochrome; YciI Family Periplasmic Protein; Signal Peptide; Ycei-Like Protein; YceI-Like Family Protein; YceI/Cytochrome

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNVYIKSSLWVLIFFVNTLIYASKLPEWEIVPAQSEITFTGTQNGAPVTGRFKKFTGQIFADPSNYKTGSIDITIDMNSI
AAPFEDIVTTLASPDWFNVKTFPNAEFKASKFNQLDDKTYEAEGILTIRDKSAPVTLKFVVEQISNDQALVEGSSTIKRS
TFGVGQGEWASTDEIQDAVIVRFKISATRKK

Sequences:

>Translated_191_residues
MNVYIKSSLWVLIFFVNTLIYASKLPEWEIVPAQSEITFTGTQNGAPVTGRFKKFTGQIFADPSNYKTGSIDITIDMNSI
AAPFEDIVTTLASPDWFNVKTFPNAEFKASKFNQLDDKTYEAEGILTIRDKSAPVTLKFVVEQISNDQALVEGSSTIKRS
TFGVGQGEWASTDEIQDAVIVRFKISATRKK
>Mature_191_residues
MNVYIKSSLWVLIFFVNTLIYASKLPEWEIVPAQSEITFTGTQNGAPVTGRFKKFTGQIFADPSNYKTGSIDITIDMNSI
AAPFEDIVTTLASPDWFNVKTFPNAEFKASKFNQLDDKTYEAEGILTIRDKSAPVTLKFVVEQISNDQALVEGSSTIKRS
TFGVGQGEWASTDEIQDAVIVRFKISATRKK

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21250; Mature: 21250

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVYIKSSLWVLIFFVNTLIYASKLPEWEIVPAQSEITFTGTQNGAPVTGRFKKFTGQIF
CEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCEEECCEEE
ADPSNYKTGSIDITIDMNSIAAPFEDIVTTLASPDWFNVKTFPNAEFKASKFNQLDDKTY
ECCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEE
EAEGILTIRDKSAPVTLKFVVEQISNDQALVEGSSTIKRSTFGVGQGEWASTDEIQDAVI
CCCEEEEEECCCCCEEHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCEEE
VRFKISATRKK
EEEEEEECCCC
>Mature Secondary Structure
MNVYIKSSLWVLIFFVNTLIYASKLPEWEIVPAQSEITFTGTQNGAPVTGRFKKFTGQIF
CEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCEEECCEEE
ADPSNYKTGSIDITIDMNSIAAPFEDIVTTLASPDWFNVKTFPNAEFKASKFNQLDDKTY
ECCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEE
EAEGILTIRDKSAPVTLKFVVEQISNDQALVEGSSTIKRSTFGVGQGEWASTDEIQDAVI
CCCEEEEEECCCCCEEHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCEEE
VRFKISATRKK
EEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA