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The map label for this gene is yfiC [C]

Identifier: 52841834

GI number: 52841834

Start: 1771492

End: 1772151

Strand: Direct

Name: yfiC [C]

Synonym: lpg1606

Alternate gene names: 52841834

Gene position: 1771492-1772151 (Clockwise)

Preceding gene: 52841831

Following gene: 52841835

Centisome position: 52.14

GC content: 33.79

Gene sequence:

>660_bases
ATGATTGATACAATACAGAGCGAACCAAAAATAAATTTTACTTATAATTACAAACAACCTGACGACTACCATTTCAGTCT
TGATTCAATTCATCTGGCTAAATTTGTTGCAAAACAATTGGAATCCTATCCAGATCTTGGTTCATTAAGAGTATTAGATC
TCTGTGCAGGCTGTGGAGTAATTGGAATTGAACTGTCATGGTATCTTCAAGCAATCCGGCAGATTGATTTTATTGAGATC
CAGGATATTTATACTGAATGTTTTTATCAAAACATAGCTAACGTTAATCGACCTGAGCTGCAATTTCGCTGGCATCTCTT
AAATTATGATGAACTACATAAAAAAAAATGGGAAGACAAATTCGATTTGATTATCAGTAATCCACCCTATTTCCAACCAG
GTCACGGAATGCTTTCCCCTTCAAAATTTAAAAATCGGTGCAGATTTTATTTAGATAGCTCTTTTCAGAGTTATATTCAA
GCGCTGGGAAATTCACTTGCAAACAGAGGTAAAGCTTATTTTTTATTACGTCCATTAAAACACCATGGTCTTGATTTATT
TTCTGACATACAAAAAATCCTGCAGGAAACATCAGTAACAGCAACAAAAATATCGCATATCCGTGGTACAGATATTATTT
TATTGGAAAAGCTGAAATGA

Upstream 100 bases:

>100_bases
ACATGCAGAATATGAAATAAATTTCAAAAATCAATTAACAGTGCAACAAGCAAGGGAATAAGGTGCTTTAAAACCATAGT
TAAGAGAAAATAATTTCAAT

Downstream 100 bases:

>100_bases
ATAGTAGTATTCTTTATAGGACATTGATTTTGGTCTGCCTTAAAAAATAAAAATATTTTTCAACACAAATTAAGTATATT
AAAATTGCATACCAAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGVIGIELSWYLQAIRQIDFIEI
QDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDKFDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQ
ALGNSLANRGKAYFLLRPLKHHGLDLFSDIQKILQETSVTATKISHIRGTDIILLEKLK

Sequences:

>Translated_219_residues
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGVIGIELSWYLQAIRQIDFIEI
QDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDKFDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQ
ALGNSLANRGKAYFLLRPLKHHGLDLFSDIQKILQETSVTATKISHIRGTDIILLEKLK
>Mature_219_residues
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGVIGIELSWYLQAIRQIDFIEI
QDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDKFDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQ
ALGNSLANRGKAYFLLRPLKHHGLDLFSDIQKILQETSVTATKISHIRGTDIILLEKLK

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25614; Mature: 25614

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGV
CCCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
IGIELSWYLQAIRQIDFIEIQDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDK
EEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCC
FDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQALGNSLANRGKAYFLLRPLK
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECHH
HHGLDLFSDIQKILQETSVTATKISHIRGTDIILLEKLK
HCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MIDTIQSEPKINFTYNYKQPDDYHFSLDSIHLAKFVAKQLESYPDLGSLRVLDLCAGCGV
CCCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
IGIELSWYLQAIRQIDFIEIQDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDK
EEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCC
FDLIISNPPYFQPGHGMLSPSKFKNRCRFYLDSSFQSYIQALGNSLANRGKAYFLLRPLK
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECHH
HHGLDLFSDIQKILQETSVTATKISHIRGTDIILLEKLK
HCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA