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The map label for this gene is miaE [H]

Identifier: 52841780

GI number: 52841780

Start: 1713954

End: 1714589

Strand: Direct

Name: miaE [H]

Synonym: lpg1550

Alternate gene names: 52841780

Gene position: 1713954-1714589 (Clockwise)

Preceding gene: 52841770

Following gene: 52841784

Centisome position: 50.44

GC content: 36.32

Gene sequence:

>636_bases
GTGTATTTTATCATGTTAAAACGATTAGATAGTGATTTACAAACGTTAAATGATTTTTTAAAAACTAAAACTCCGGAAGC
CTGGTTAAACCATGCAGCTGCCAATATACCTCTTTTATTGCTCGATCATGCTCATTGTGAACGTAAAGCAGCTGGAACAG
CAATTAATTTCATAAGCAAATATCCAGAAAAAGCAGAATTAGTAGCAATTATGGCACCATTGGCAAGAGAAGAATTACTG
CACTTTGAAAAAGTCATTGATATCATGAAGCAAAAGGGAATTGTTTATTCTCCCTTGCAGCCATCAGACTATGCATCCAA
TTTGCATAAGCATGTCACAAATAAAGATGGAATTGAGAGACTATGCGATCAATTAATTATAGGTGCTATCATTGAGGCCC
GATCGTGCGAGCGTTTTAGCTCAATAATTCCATATATTGAAGATCAGGACTTAGCCAGGTTTTATAAAACATTGGTTAAA
TCAGAATGCAGGCATTTTGAAGAGTATTTGCATTTGGCCAAGTTCTATGGCGGTTCTGTTGATGATCGTATTTCGGAGTT
TTTAACTATAGAAAATGCATTTATCTTATCAGACGATGTGGTATTTCGCTTTCATAGTGGCTTGCCTCCGGCTTGA

Upstream 100 bases:

>100_bases
CCATTGACTCAATTCATCATCTTTTTTGATCTCGTCCATTTTTTATCCAATTTAAATTCTTTAAAGTATGTGATATAAGG
GCTATTTACTTGAAATTATA

Downstream 100 bases:

>100_bases
TGCCTTAAAACAGAGTCAACAGATTTTTCAGCACTAGCCCATAAGTATTATATACAGGCTAGTGCAACCCAATATTTCTC
TTGCTTAATCAAGGTCTGCT

Product: tRNA-(ms(2)io(6)a)-hydrolase(tRNA hydroxylase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MYFIMLKRLDSDLQTLNDFLKTKTPEAWLNHAAANIPLLLLDHAHCERKAAGTAINFISKYPEKAELVAIMAPLAREELL
HFEKVIDIMKQKGIVYSPLQPSDYASNLHKHVTNKDGIERLCDQLIIGAIIEARSCERFSSIIPYIEDQDLARFYKTLVK
SECRHFEEYLHLAKFYGGSVDDRISEFLTIENAFILSDDVVFRFHSGLPPA

Sequences:

>Translated_211_residues
MYFIMLKRLDSDLQTLNDFLKTKTPEAWLNHAAANIPLLLLDHAHCERKAAGTAINFISKYPEKAELVAIMAPLAREELL
HFEKVIDIMKQKGIVYSPLQPSDYASNLHKHVTNKDGIERLCDQLIIGAIIEARSCERFSSIIPYIEDQDLARFYKTLVK
SECRHFEEYLHLAKFYGGSVDDRISEFLTIENAFILSDDVVFRFHSGLPPA
>Mature_211_residues
MYFIMLKRLDSDLQTLNDFLKTKTPEAWLNHAAANIPLLLLDHAHCERKAAGTAINFISKYPEKAELVAIMAPLAREELL
HFEKVIDIMKQKGIVYSPLQPSDYASNLHKHVTNKDGIERLCDQLIIGAIIEARSCERFSSIIPYIEDQDLARFYKTLVK
SECRHFEEYLHLAKFYGGSVDDRISEFLTIENAFILSDDVVFRFHSGLPPA

Specific function: Production of the modified nucleoside 2-methylthio-cis- ribozeatin (MS[2]IO[6]A) found in some tRNAs. Catalyzes the oxygen-dependent transformation of MS[2]I[6]A into MS[2]IO[6]A [H]

COG id: COG4445

COG function: function code FJ; Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR010386 [H]

Pfam domain/function: PF06175 MiaE [H]

EC number: NA

Molecular weight: Translated: 24156; Mature: 24156

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFIMLKRLDSDLQTLNDFLKTKTPEAWLNHAAANIPLLLLDHAHCERKAAGTAINFISK
CEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH
YPEKAELVAIMAPLAREELLHFEKVIDIMKQKGIVYSPLQPSDYASNLHKHVTNKDGIER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHCCCHHHHHH
LCDQLIIGAIIEARSCERFSSIIPYIEDQDLARFYKTLVKSECRHFEEYLHLAKFYGGSV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DDRISEFLTIENAFILSDDVVFRFHSGLPPA
HHHHHHHHHHHHHEEECCHHHHHCCCCCCCC
>Mature Secondary Structure
MYFIMLKRLDSDLQTLNDFLKTKTPEAWLNHAAANIPLLLLDHAHCERKAAGTAINFISK
CEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH
YPEKAELVAIMAPLAREELLHFEKVIDIMKQKGIVYSPLQPSDYASNLHKHVTNKDGIER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHCCCHHHHHH
LCDQLIIGAIIEARSCERFSSIIPYIEDQDLARFYKTLVKSECRHFEEYLHLAKFYGGSV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DDRISEFLTIENAFILSDDVVFRFHSGLPPA
HHHHHHHHHHHHHEEECCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253666; 11677609 [H]