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The map label for this gene is 52841678

Identifier: 52841678

GI number: 52841678

Start: 1595787

End: 1596572

Strand: Direct

Name: 52841678

Synonym: lpg1448

Alternate gene names: NA

Gene position: 1595787-1596572 (Clockwise)

Preceding gene: 52841677

Following gene: 52841679

Centisome position: 46.97

GC content: 30.53

Gene sequence:

>786_bases
TTGCCCATGAGTTTGAAAAGAGAAGTAATGCCTAATTCATCAAATGTTTTAAGGCATATGGAAAATCACTTTGCCTTGAC
TACCTGTGAAGATATAAAAAATATCATGCAACCTTTGCTCATAAAACATGGTATGACAGTCTTTAATTATTATCGAATTT
ACTTTGATAGTACTGTCATTAGACTCTCCACAGACCAAAAATGGACTGAGCATTATTTTAAAATGAACTATCTGGAGACA
CTGACTATTCCAGAATCCTATTTAAAAAAACCGCTGAATTATTATTTATGGCTAACGGATGACTGTCCTTTGATGCTCCA
AGATGCAGCAATAAATTTCAACATGGCCAATGGTATATCTATTGCTAAAATAAACCATGATTCTATAGAATATTTTTGTT
TTGCAAGTACACGTGATAATACAAGTATTGTTAATAACTTTTATCTCAATAATCTGGATGTTCTAGAACAATATAGTCTT
TACTTTAAAGATCAATTTAATTCAATAATAAGTCAATTCGAAAAAAATAAAATAATACTCCCCTATAATGCTACTTGTTG
TCAGAGCAACAAAATTAATAAGGAATTAAAAAGATCCCTTCTTTCTCCTCGTCAAAAGGACTGTGCAAAACTCTTATTGC
AAGGAATGAGTTATAAGGAAATTGGGAAAATACTCCAATTATCAGCTAGAACTGTTGAAACCCACGTTAATCAATTAAAA
ACAAAATTGGGATGTGATAATAAAGCTGAATTGATTCTTCAATTGAACGGAATAATTACAAGATAA

Upstream 100 bases:

>100_bases
TTTAGGGAACGAAAATTTAACATCTGAAGAAGCACTGGAGCAATTTACATGGCTTTCCAAAAAATGCTGAATCCAGATCT
GAAAATCTACGCAAGATTAT

Downstream 100 bases:

>100_bases
ATAGCTATTTTATCCGTGATTTTACGGATATTCTCTGAATGTTACTTTAAGTATTCTTTATGTTTTTATACAAGAGAGTA
CTTAAATGCAGAATAAAGTT

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family Protein; Transcription Regulator; Transcription Regulator Protein Luxr Family

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPMSLKREVMPNSSNVLRHMENHFALTTCEDIKNIMQPLLIKHGMTVFNYYRIYFDSTVIRLSTDQKWTEHYFKMNYLET
LTIPESYLKKPLNYYLWLTDDCPLMLQDAAINFNMANGISIAKINHDSIEYFCFASTRDNTSIVNNFYLNNLDVLEQYSL
YFKDQFNSIISQFEKNKIILPYNATCCQSNKINKELKRSLLSPRQKDCAKLLLQGMSYKEIGKILQLSARTVETHVNQLK
TKLGCDNKAELILQLNGIITR

Sequences:

>Translated_261_residues
MPMSLKREVMPNSSNVLRHMENHFALTTCEDIKNIMQPLLIKHGMTVFNYYRIYFDSTVIRLSTDQKWTEHYFKMNYLET
LTIPESYLKKPLNYYLWLTDDCPLMLQDAAINFNMANGISIAKINHDSIEYFCFASTRDNTSIVNNFYLNNLDVLEQYSL
YFKDQFNSIISQFEKNKIILPYNATCCQSNKINKELKRSLLSPRQKDCAKLLLQGMSYKEIGKILQLSARTVETHVNQLK
TKLGCDNKAELILQLNGIITR
>Mature_260_residues
PMSLKREVMPNSSNVLRHMENHFALTTCEDIKNIMQPLLIKHGMTVFNYYRIYFDSTVIRLSTDQKWTEHYFKMNYLETL
TIPESYLKKPLNYYLWLTDDCPLMLQDAAINFNMANGISIAKINHDSIEYFCFASTRDNTSIVNNFYLNNLDVLEQYSLY
FKDQFNSIISQFEKNKIILPYNATCCQSNKINKELKRSLLSPRQKDCAKLLLQGMSYKEIGKILQLSARTVETHVNQLKT
KLGCDNKAELILQLNGIITR

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30503; Mature: 30372

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSLKREVMPNSSNVLRHMENHFALTTCEDIKNIMQPLLIKHGMTVFNYYRIYFDSTVI
CCCCCCHHHCCCHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHCCCHHHHHEEEEEECEEE
RLSTDQKWTEHYFKMNYLETLTIPESYLKKPLNYYLWLTDDCPLMLQDAAINFNMANGIS
EEECCCHHHHHHHHHHHHEEECCCHHHHCCCCEEEEEECCCCCEEEECCEEEEECCCCEE
IAKINHDSIEYFCFASTRDNTSIVNNFYLNNLDVLEQYSLYFKDQFNSIISQFEKNKIIL
EEEECCCCEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
PYNATCCQSNKINKELKRSLLSPRQKDCAKLLLQGMSYKEIGKILQLSARTVETHVNQLK
CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TKLGCDNKAELILQLNGIITR
HHHCCCCCCEEEEEECCEECC
>Mature Secondary Structure 
PMSLKREVMPNSSNVLRHMENHFALTTCEDIKNIMQPLLIKHGMTVFNYYRIYFDSTVI
CCCCCHHHCCCHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHCCCHHHHHEEEEEECEEE
RLSTDQKWTEHYFKMNYLETLTIPESYLKKPLNYYLWLTDDCPLMLQDAAINFNMANGIS
EEECCCHHHHHHHHHHHHEEECCCHHHHCCCCEEEEEECCCCCEEEECCEEEEECCCCEE
IAKINHDSIEYFCFASTRDNTSIVNNFYLNNLDVLEQYSLYFKDQFNSIISQFEKNKIIL
EEEECCCCEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
PYNATCCQSNKINKELKRSLLSPRQKDCAKLLLQGMSYKEIGKILQLSARTVETHVNQLK
CCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TKLGCDNKAELILQLNGIITR
HHHCCCCCCEEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA