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The map label for this gene is scpA [H]

Identifier: 52841675

GI number: 52841675

Start: 1593441

End: 1594232

Strand: Direct

Name: scpA [H]

Synonym: lpg1445

Alternate gene names: 52841675

Gene position: 1593441-1594232 (Clockwise)

Preceding gene: 52841674

Following gene: 52841676

Centisome position: 46.9

GC content: 38.26

Gene sequence:

>792_bases
ATGAATATCGATTTGCAGCCTGCGCCTGTAGTCAAAGCGGTGGTGGATGGTAAGGAAATTACTCAGTTTCCAGAGGATTT
ATATATTCCTCCTGATGCATTGGAGGTATTACTGGATTCTTTTACCGGGCCATTAGATTTATTGCTGTATTTAATCCGCA
AGCAAAATATTGATATTCTTGATATTCCCATGACAAGTATAACCAACCAGTATTTACAATATATCCAGCTCATGGAAAAT
CGAAGAATGGAGCTGGCTGCCGAGTATTTATTAATGGCTGCCATGTTAGCTGAAATCAAGTCACGTTTATTATTGCCAGT
TACACCAGATTCAGAGGAGGAGGAAGAAGATCCACGTATGACTCTGGTAAGACAGTTGCAAGCTTATGAGCAAATAAAAC
AAGCGGCTGAATTATTGGATGGATTGCCAAGACAAGACAGAGATAATTTTACAATTCAGGTTAATCCAGACGAGGTTGAA
GCAATTAAAGTTTATCCTGAAGTTGAGTTATCTGAGTTAGTCGAGGCTATGAAAATTTTGCTAAAACGTGAAGAGCATTA
TTCCAAACATCAAGTTTCCAGGGAATTAATGTCTGTTCGTGAACGAATGAGTCGTATTCTCTTTCAATTGCAGCATCAAA
AAATTTTGGAATTTGGCCAATTATATACTCTTGAAGAGGGAAGGATGGGATTGGTTGTGAGTTTTTTAGCTATTCTTGAA
CTGGCTAAGCAGTCTTTATTGATCATTACGCAAACTCAGCCATTTTCACCTATACATTTGCAGGCTGCATGA

Upstream 100 bases:

>100_bases
GTTCGGTAAAACGTATTGTAGCGGAAGGAAGCGAAGCGGCCAGAGAAGAAGGAAACAAGACTTTAAATACGGTCAGAGAA
GTCATGGGGCTTGATTATTA

Downstream 100 bases:

>100_bases
GATGATTGACAATGAATTAAAAAATATTGTTGAAGCTTTGGTATTATCCAGTAATGAGCCCGTTACTTTAGAAAAAATAC
AAGAAACCTTTGATGAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDILDIPMTSITNQYLQYIQLMEN
RRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRMTLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVE
AIKVYPEVELSELVEAMKILLKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFGQLYTLEEGRMGLVVSFLAILE
LAKQSLLIITQTQPFSPIHLQAA

Sequences:

>Translated_263_residues
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDILDIPMTSITNQYLQYIQLMEN
RRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRMTLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVE
AIKVYPEVELSELVEAMKILLKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFGQLYTLEEGRMGLVVSFLAILE
LAKQSLLIITQTQPFSPIHLQAA
>Mature_263_residues
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDILDIPMTSITNQYLQYIQLMEN
RRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRMTLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVE
AIKVYPEVELSELVEAMKILLKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFGQLYTLEEGRMGLVVSFLAILE
LAKQSLLIITQTQPFSPIHLQAA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30373; Mature: 30373

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDIL
CCCCCCCCHHHHHHHCCHHHHHCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
DIPMTSITNQYLQYIQLMENRRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHH
TLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVEAIKVYPEVELSELVEAMKIL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
LKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFGQLYTLEEGRMGLVVSFLAILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
LAKQSLLIITQTQPFSPIHLQAA
HHHCCEEEEECCCCCCCEEEECC
>Mature Secondary Structure
MNIDLQPAPVVKAVVDGKEITQFPEDLYIPPDALEVLLDSFTGPLDLLLYLIRKQNIDIL
CCCCCCCCHHHHHHHCCHHHHHCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE
DIPMTSITNQYLQYIQLMENRRMELAAEYLLMAAMLAEIKSRLLLPVTPDSEEEEEDPRM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHH
TLVRQLQAYEQIKQAAELLDGLPRQDRDNFTIQVNPDEVEAIKVYPEVELSELVEAMKIL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHH
LKREEHYSKHQVSRELMSVRERMSRILFQLQHQKILEFGQLYTLEEGRMGLVVSFLAILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
LAKQSLLIITQTQPFSPIHLQAA
HHHCCEEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]