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The map label for this gene is xcpU

Identifier: 52841591

GI number: 52841591

Start: 1506925

End: 1507479

Strand: Reverse

Name: xcpU

Synonym: lpg1361

Alternate gene names: 52841591

Gene position: 1507479-1506925 (Counterclockwise)

Preceding gene: 52841592

Following gene: 52841590

Centisome position: 44.37

GC content: 39.64

Gene sequence:

>555_bases
ATGTCTTTACTTATGGAGCAGCAGGACAACCTGGCGGAACAGGGATTAATGCGGAGATTGGTAACTGGGATGACCACTCA
TAAGGGTTTTACCCTGATAGAAATTCTTATTGTCATAGTGATTATAGGTATAACCTTGGGGTTTGCCTTAATCGCTTTTG
GTGATTTCGGAGAAAGCAGACGTATACAATTTTCAGCTGAACAATTGGCAAATACCCTAAGCCTGGCTCAACAACAAGCC
ATTTTAGAAAGCAGTACCCTTGGGTTAAAAATAGATAATAGCAGTTACCAAATTCTTAAGTTTCAGGACCAGGCGGGATG
GAATCCCATATCGAACAAAGGAATTTTTAAACTCTACTATTTTCCCAAAAACGTTGTGATTAGCCTTAAAACAAATCTAA
AACATAGCCGGGGGAACCCTGCAATCATAATAGCACCATCTGGTGACATGACCCCTTTTACTATAGAATTTGGCACAGAT
AAGGAAAAATGGATAGCCAAACTTACAGGCAGCCATAATGGTGATTTGGATTTTACCATGGCAAAATCTCAATGA

Upstream 100 bases:

>100_bases
CCTGTTCCAACGAATTGGAAACAATATCTGAAATCATTGCCAAAAGATCCATGGGGCAGAGAATATCTTTATTTAAACCC
AGGACAACATACTGACGTTG

Downstream 100 bases:

>100_bases
TGCCGAAAACTAAACTAGTCTCCGGATTTACTTTGATAGAAGTCTTATTGGCTCTTACTGTCATTGCAATTGCTTTAACA
GCGCTTTTAAAAGCAACTGC

Product: type II secretory pathway protein LspH

Products: NA

Alternate protein names: PilD-dependent protein pddB [H]

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSLLMEQQDNLAEQGLMRRLVTGMTTHKGFTLIEILIVIVIIGITLGFALIAFGDFGESRRIQFSAEQLANTLSLAQQQA
ILESSTLGLKIDNSSYQILKFQDQAGWNPISNKGIFKLYYFPKNVVISLKTNLKHSRGNPAIIIAPSGDMTPFTIEFGTD
KEKWIAKLTGSHNGDLDFTMAKSQ

Sequences:

>Translated_184_residues
MSLLMEQQDNLAEQGLMRRLVTGMTTHKGFTLIEILIVIVIIGITLGFALIAFGDFGESRRIQFSAEQLANTLSLAQQQA
ILESSTLGLKIDNSSYQILKFQDQAGWNPISNKGIFKLYYFPKNVVISLKTNLKHSRGNPAIIIAPSGDMTPFTIEFGTD
KEKWIAKLTGSHNGDLDFTMAKSQ
>Mature_183_residues
SLLMEQQDNLAEQGLMRRLVTGMTTHKGFTLIEILIVIVIIGITLGFALIAFGDFGESRRIQFSAEQLANTLSLAQQQAI
LESSTLGLKIDNSSYQILKFQDQAGWNPISNKGIFKLYYFPKNVVISLKTNLKHSRGNPAIIIAPSGDMTPFTIEFGTDK
EKWIAKLTGSHNGDLDFTMAKSQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP H family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002416
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR022346 [H]

Pfam domain/function: PF12019 GspH; PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 20398; Mature: 20267

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLMEQQDNLAEQGLMRRLVTGMTTHKGFTLIEILIVIVIIGITLGFALIAFGDFGESR
CCCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RIQFSAEQLANTLSLAQQQAILESSTLGLKIDNSSYQILKFQDQAGWNPISNKGIFKLYY
EEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEE
FPKNVVISLKTNLKHSRGNPAIIIAPSGDMTPFTIEFGTDKEKWIAKLTGSHNGDLDFTM
ECCEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEE
AKSQ
ECCC
>Mature Secondary Structure 
SLLMEQQDNLAEQGLMRRLVTGMTTHKGFTLIEILIVIVIIGITLGFALIAFGDFGESR
CCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RIQFSAEQLANTLSLAQQQAILESSTLGLKIDNSSYQILKFQDQAGWNPISNKGIFKLYY
EEEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEE
FPKNVVISLKTNLKHSRGNPAIIIAPSGDMTPFTIEFGTDKEKWIAKLTGSHNGDLDFTM
ECCEEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEE
AKSQ
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1588814; 1309616; 10984043 [H]