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The map label for this gene is fliC

Identifier: 52841570

GI number: 52841570

Start: 1478135

End: 1479562

Strand: Reverse

Name: fliC

Synonym: lpg1340

Alternate gene names: 52841570

Gene position: 1479562-1478135 (Counterclockwise)

Preceding gene: 52841575

Following gene: 52841569

Centisome position: 43.55

GC content: 45.31

Gene sequence:

>1428_bases
ATGGCTCAAGTAATCAACACTAATGTGGCGTCGCTCACAGCCCAACGTAATTTGGGTGTTTCGGGCAACATGATGCAAAC
ATCGATCCAGCGTTTATCATCGGGATTAAGGATTAACAGTGCCAAAGATGATGCAGCAGGACTCGCCATTTCTCAACGAA
TGACTGCACAAATTCGCGGGATGAACCAAGCCGTTAGAAATGCCAACGATGGTATTTCCCTGGCTCAGGTTGCTGAAGGA
GCAATGCAGGAAACAACCAATATTTTACAACGCATGCGTGAGCTTTCCGTTCAAGCTGCTAACTCAACCAATAACTCATC
TGACCGGTCTTCAATTCAAAGTGAAATTTCACAATTAAAAAGTGAATTGGAGCGTATTGCTCAAAATACTGAATTCAATG
GTCAAAGAATTCTCGATGGTTCTTTCTCTGGCGCAAGCTTCCAGGTTGGGGCGAATTCAAACCAAACCATCAATTTCAGT
ATCGGCAGCACAAAAGCTTCTTCTCTTGGTGGTATTGCCACGGCAACAGGAACAGAAGTAGCAGGTGCAGCAGCGGCAGA
TATTACTATCGCAATTGGAGGAGGAGCAGCAACCAGTATTAACTCTTCTGCCAATTTTACCGGGGCACTAAACGGACAAG
ATGCTACGTCAGCCTATGCCAAAGCAGCGGCTATCAACGATGCCGGGATAGGAGGACTATCGGTTACAGCGTCTACCAGC
GGCACACAAGCAGTTGGCGCAATAGGTGGAACTGCAGGTGATACCTACAACTTAACGATTAATGGTGTTGCAATATACAC
TAACCTTAACGTAGCAACGGCATTAACCAACTCTGATCTTAGAGATGCCATCAATGGCGTCAGTAACCAAACTGGAGTTG
TTGCATCACTTAACGGTGGTAATATGACACTCACTGCTGCTGATGGCAGAAACATTACGGTAACAGAAAGCGGTACAGGT
TTTACTGCAGGTACTGACGGTTTAACTGTAACTGGTGGCGCATTTGATGGCGCGCTACGCGGTACTTTATCAATCAGCGC
CGTTGATACTATCGCGATTGGTGGTACTGTTGCTAACATTGGTTTAAGTGCCAATATCTCTAAAGACACAGTAGGGATAG
ATTCACTGGATGTGAGCACAGCGTCTGGCGCTCAAACAGCGATTAAGAGAATTGATGCAGCACTCAATAGCGTAAACTCT
AATCGGGCTAATATGGGTGCTCTGCAAAATCGCTTTGAATCAACGATAGCCAACCTGCAAAACGTATCAGACAACTTATC
AGCTGCTAGAAGTCGTATTCAAGATGCTGATTACGCTGCTGAAATGGCTAGTTTGACCAAAAACCAAATTCTGCAACAAG
CAGGTACAGCGATGTTGGCACAAGCTAATAGCCTACCGCAATCTGTATTATCTTTGTTAGGTCGATAG

Upstream 100 bases:

>100_bases
CGATAACTAAATCGGGTACAGTAAATTCACAACAATAAATCGAATTTACTGAATTACAAATGTCCCATACCAGGGATTCA
GGTCTGAGGAGACTAAAATT

Downstream 100 bases:

>100_bases
GATGTCGCAATCGAAGTGCAGCAACAACTGCACTTCGATTTCTTTATACCTCGGTTGATGGGTATAAAAAGGAGTAAGAA
AAATGAGTATTGAACCTGTA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEG
AMQETTNILQRMRELSVQAANSTNNSSDRSSIQSEISQLKSELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFS
IGSTKASSLGGIATATGTEVAGAAAADITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTS
GTQAVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNMTLTAADGRNITVTESGTG
FTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNS
NRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR

Sequences:

>Translated_475_residues
MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEG
AMQETTNILQRMRELSVQAANSTNNSSDRSSIQSEISQLKSELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFS
IGSTKASSLGGIATATGTEVAGAAAADITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTS
GTQAVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNMTLTAADGRNITVTESGTG
FTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNS
NRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR
>Mature_474_residues
AQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEGA
MQETTNILQRMRELSVQAANSTNNSSDRSSIQSEISQLKSELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSI
GSTKASSLGGIATATGTEVAGAAAADITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTSG
TQAVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGGNMTLTAADGRNITVTESGTGF
TAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANIGLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSN
RANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=172, Percent_Identity=54.6511627906977, Blast_Score=171, Evalue=1e-43,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 47845; Mature: 47714

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRG
CCCEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
MNQAVRNANDGISLAQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRSSIQSEISQLK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSTKASSLGGIATATGTEV
HHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEECCCCCC
AGAAAADITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTS
CCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEECCC
GTQAVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGG
CCCCCCCCCCCCCCEEEEEEEEEEEEEECEEEEEECCHHHHHHHHCCCCCCCEEEEECCC
NMTLTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANI
EEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHCEEEEEEEEEEEECCEEEEC
GLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQ
CEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
NVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
AQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRG
CCEECCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
MNQAVRNANDGISLAQVAEGAMQETTNILQRMRELSVQAANSTNNSSDRSSIQSEISQLK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SELERIAQNTEFNGQRILDGSFSGASFQVGANSNQTINFSIGSTKASSLGGIATATGTEV
HHHHHHHHCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCEEECCCCCC
AGAAAADITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAINDAGIGGLSVTASTS
CCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEECCC
GTQAVGAIGGTAGDTYNLTINGVAIYTNLNVATALTNSDLRDAINGVSNQTGVVASLNGG
CCCCCCCCCCCCCCEEEEEEEEEEEEEECEEEEEECCHHHHHHHHCCCCCCCEEEEECCC
NMTLTAADGRNITVTESGTGFTAGTDGLTVTGGAFDGALRGTLSISAVDTIAIGGTVANI
EEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHCEEEEEEEEEEEECCEEEEC
GLSANISKDTVGIDSLDVSTASGAQTAIKRIDAALNSVNSNRANMGALQNRFESTIANLQ
CEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
NVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8562027 [H]