Click here to switch to the map view.

The map label for this gene is 52841495

Identifier: 52841495

GI number: 52841495

Start: 1388724

End: 1389992

Strand: Direct

Name: 52841495

Synonym: lpg1263

Alternate gene names: NA

Gene position: 1388724-1389992 (Clockwise)

Preceding gene: 52841494

Following gene: 52841497

Centisome position: 40.87

GC content: 25.77

Gene sequence:

>1269_bases
ATGAAAAAAAGTATAAAAAAAGTCTTTTTGGATTGGCTGTATAACTTTTATGTTTATGTAAAAATAAAAAACATTCAGTA
TGAAGGAAAAATTTTAAGAGAAATTAAAACTTCTTTGTCTTTAGCTATTAGGCAGTTACTAGATAAAAGCATACCAGGCT
ATGATCCGAACGCTGATGATTTTATAAATAAGCTATGCAATGAGCTACTACATATAAAACGAATTACCCCCAAAGATTTA
GATTATATGCAAATTAAAGAACTAAAAAAAAGTGTGGAAGCAGAGCCGACAGTTAAAAATATATTATCTTATAATATTCA
GTTAAAGGCTTTAAAAGCTTATGTAGAACATAGCGACACTCTATTGAATAGTGAAAAAAAAAGGAAGCAAGCACAGAAAA
ATTACATAAAACTTATCCAATTAGCTAAATCCATGGGTTTATTAGCATTTGATCCTAACAAACCACGTCATAATCAGCTA
TTACAAACAGTGAAAAAAAATAAAGCTAATAGTTTTGCAAAGCTTCTAACAAAAAATGCTAATTATGATAATCAATTGTT
AAAAGATTTTTTAAATAATTTTAATAAAATATTGTCACTCAGTATTATTATTATAATTATTGGCTCATCTACATATGAAT
TTGGATATTTTTTTAATTTAGGATTGAGGATAAATGACCTGCCTGTTGGCTATACAGATTTATTCTTTATTTCTTTAAGT
TGGGCTCCTAAGATAATATTCGCAGTGTTTATAATAATGCTTTTAGAAATATATTATTATCGGAAATCTGTTACGCAAGG
TCTAAGTTATTCTTTATTAGATAATGAAGATAAATGGTTTACTCACTATTTATTGTTTTGTTTTTTTTCATTGGTTATTT
TTATTTCTTCATCTTTTTCAATTCGATATTATTTCTATCTCTTATTCGTTTCTTTTTTATATAGCTCTGTAATTAAGTTT
TTATTTAATGTTCCTTCTATGATTATTAGGACGCCAGTATTTATAAAATATACAGTAACTTATGTTCCGTTATTGGCTTG
TGTTTTTTTTGTGCATGGATGTCTTCAGGCTAGAGAAGATATTATTCCAAACAGGGCCAATGCAATACAAATACTTTTAC
AAGACTCTTCTAAAATAAAAGATGCGTTAATATTGAAAAATTTTAATTCAGGGATTCTATATGTAGATGTTTATAATAAA
ATTCACTATTTATCAAAATCAGAAATAATAAAGTTAACATTTATGAAAAATAAAATTAATTCTGATTAG

Upstream 100 bases:

>100_bases
TCTAAGTTCAAAACGCGGTGAAGTATGCCCTATGAAAAATGATTCTTAATTTATTTTTTATAAAGTCGATAAGTCGACTA
TATATAATGAGGTTTGCTGC

Downstream 100 bases:

>100_bases
TTAATAGTAATTTCTATTGGAATTAGATGTTGATTTAGAAAGTAAATAAGACTTTATCTATTTTAATTACCTATAAAAAC
ATAAAGCCAATCCATCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKKSIKKVFLDWLYNFYVYVKIKNIQYEGKILREIKTSLSLAIRQLLDKSIPGYDPNADDFINKLCNELLHIKRITPKDL
DYMQIKELKKSVEAEPTVKNILSYNIQLKALKAYVEHSDTLLNSEKKRKQAQKNYIKLIQLAKSMGLLAFDPNKPRHNQL
LQTVKKNKANSFAKLLTKNANYDNQLLKDFLNNFNKILSLSIIIIIIGSSTYEFGYFFNLGLRINDLPVGYTDLFFISLS
WAPKIIFAVFIIMLLEIYYYRKSVTQGLSYSLLDNEDKWFTHYLLFCFFSLVIFISSSFSIRYYFYLLFVSFLYSSVIKF
LFNVPSMIIRTPVFIKYTVTYVPLLACVFFVHGCLQAREDIIPNRANAIQILLQDSSKIKDALILKNFNSGILYVDVYNK
IHYLSKSEIIKLTFMKNKINSD

Sequences:

>Translated_422_residues
MKKSIKKVFLDWLYNFYVYVKIKNIQYEGKILREIKTSLSLAIRQLLDKSIPGYDPNADDFINKLCNELLHIKRITPKDL
DYMQIKELKKSVEAEPTVKNILSYNIQLKALKAYVEHSDTLLNSEKKRKQAQKNYIKLIQLAKSMGLLAFDPNKPRHNQL
LQTVKKNKANSFAKLLTKNANYDNQLLKDFLNNFNKILSLSIIIIIIGSSTYEFGYFFNLGLRINDLPVGYTDLFFISLS
WAPKIIFAVFIIMLLEIYYYRKSVTQGLSYSLLDNEDKWFTHYLLFCFFSLVIFISSSFSIRYYFYLLFVSFLYSSVIKF
LFNVPSMIIRTPVFIKYTVTYVPLLACVFFVHGCLQAREDIIPNRANAIQILLQDSSKIKDALILKNFNSGILYVDVYNK
IHYLSKSEIIKLTFMKNKINSD
>Mature_422_residues
MKKSIKKVFLDWLYNFYVYVKIKNIQYEGKILREIKTSLSLAIRQLLDKSIPGYDPNADDFINKLCNELLHIKRITPKDL
DYMQIKELKKSVEAEPTVKNILSYNIQLKALKAYVEHSDTLLNSEKKRKQAQKNYIKLIQLAKSMGLLAFDPNKPRHNQL
LQTVKKNKANSFAKLLTKNANYDNQLLKDFLNNFNKILSLSIIIIIIGSSTYEFGYFFNLGLRINDLPVGYTDLFFISLS
WAPKIIFAVFIIMLLEIYYYRKSVTQGLSYSLLDNEDKWFTHYLLFCFFSLVIFISSSFSIRYYFYLLFVSFLYSSVIKF
LFNVPSMIIRTPVFIKYTVTYVPLLACVFFVHGCLQAREDIIPNRANAIQILLQDSSKIKDALILKNFNSGILYVDVYNK
IHYLSKSEIIKLTFMKNKINSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49346; Mature: 49346

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIKKVFLDWLYNFYVYVKIKNIQYEGKILREIKTSLSLAIRQLLDKSIPGYDPNADD
CCHHHHHHHHHHHHHEEEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
FINKLCNELLHIKRITPKDLDYMQIKELKKSVEAEPTVKNILSYNIQLKALKAYVEHSDT
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHH
LLNSEKKRKQAQKNYIKLIQLAKSMGLLAFDPNKPRHNQLLQTVKKNKANSFAKLLTKNA
HHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
NYDNQLLKDFLNNFNKILSLSIIIIIIGSSTYEFGYFFNLGLRINDLPVGYTDLFFISLS
CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEECEEEECCCCCHHHEEEEEEC
WAPKIIFAVFIIMLLEIYYYRKSVTQGLSYSLLDNEDKWFTHYLLFCFFSLVIFISSSFS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCH
IRYYFYLLFVSFLYSSVIKFLFNVPSMIIRTPVFIKYTVTYVPLLACVFFVHGCLQARED
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHH
IIPNRANAIQILLQDSSKIKDALILKNFNSGILYVDVYNKIHYLSKSEIIKLTFMKNKIN
CCCCCCCCEEEEECCCCHHHHHHHEEECCCCEEEEEEHHHHHHCCCCCEEEEEEECCCCC
SD
CC
>Mature Secondary Structure
MKKSIKKVFLDWLYNFYVYVKIKNIQYEGKILREIKTSLSLAIRQLLDKSIPGYDPNADD
CCHHHHHHHHHHHHHEEEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
FINKLCNELLHIKRITPKDLDYMQIKELKKSVEAEPTVKNILSYNIQLKALKAYVEHSDT
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHH
LLNSEKKRKQAQKNYIKLIQLAKSMGLLAFDPNKPRHNQLLQTVKKNKANSFAKLLTKNA
HHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
NYDNQLLKDFLNNFNKILSLSIIIIIIGSSTYEFGYFFNLGLRINDLPVGYTDLFFISLS
CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEECEEEECCCCCHHHEEEEEEC
WAPKIIFAVFIIMLLEIYYYRKSVTQGLSYSLLDNEDKWFTHYLLFCFFSLVIFISSSFS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCH
IRYYFYLLFVSFLYSSVIKFLFNVPSMIIRTPVFIKYTVTYVPLLACVFFVHGCLQARED
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHH
IIPNRANAIQILLQDSSKIKDALILKNFNSGILYVDVYNKIHYLSKSEIIKLTFMKNKIN
CCCCCCCCEEEEECCCCHHHHHHHEEECCCCEEEEEEHHHHHHCCCCCEEEEEEECCCCC
SD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA