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The map label for this gene is prpA

Identifier: 52841492

GI number: 52841492

Start: 1386688

End: 1387428

Strand: Direct

Name: prpA

Synonym: lpg1260

Alternate gene names: NA

Gene position: 1386688-1387428 (Clockwise)

Preceding gene: 52841488

Following gene: 52841494

Centisome position: 40.81

GC content: 34.55

Gene sequence:

>741_bases
TTGAGAATGAGTCAATATCTGTTATCATATTTTTTAAGAATATTTTTGTATGCCAACCGAATGAGTATTAAAGAAAAAAT
TGGATTAAGGATTAAACAAGAGCGCATGAGCAAAAAGCTCACTATGAAAGCACTTGCTGAGCTAACAGATAACCTAAATA
TCTCTCGAATAAACAATTATGAGAGGGGAGAGCGAACCCCCGGGCCAGAGGAAATTAAACAGCTAGCAAGGGCTTTAGAA
GTTTCTCCTTCGTTTTTAATGTGTCTCTCTGATGATCGCCAAGGTAGTTTTAAAACCCCAGGCTTAGGTGGTCTGTTGCC
TATATTAGATTATAAAAGTGCTTGTTATCCTGCTCTAGTAATTCAAAGAATAAAAGAAGAGTCTTACTCTGAAAAATTAG
ATTTAATTCCGATTAGTTCTACTGTTCAAAAGCGCATAGGGAAAAACGCTTTTGCGCTTGCAGTTAAAGATGAGAGTATG
GCTCCTGAGTTTAAATTTGATGATATTTTAATTGTCGATCCCGATACTCAGCCAAATCCCGGTGATTATATCGTTGCCAG
ATTGGAAAATGAGCCTGAAATAATTATTCGCAAGTTTAAACAGTTATCAGTATCCAAAGAAAAACCTGAGTTTGAATTAG
TTGCAATCAATAATGATTGGCCGGATGTTAAAATTTCAAAGGAATTGAATGAAATTTTTATTGGCTCAGTTATTTCATTA
TTTAGAACTATTAAACGTTAA

Upstream 100 bases:

>100_bases
ACATCCCCGCACTTCTCCATATGCCAAGTCCAAATTACAATAAACTCTTTATGAGTAAAAATACACGAAACGAGTAATTA
AAGTTTAAAGTTAACACACA

Downstream 100 bases:

>100_bases
ATCCTTAGTCCAAAAACATTTAGGGCTAGATATATAAAGCAGTTTTTCCTGTAACGGTTAGCAATTGCCTACTTGCATTC
TAAAACCATGCCTCATGCGA

Product: phage repressor

Products: NA

Alternate protein names: LexA Family Repressor/S24 Family Protease; XRE Family Transcriptional Regulator; Prophage Repressor CI; Prophage Repressor CI-Like; LexA Repressor

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRMSQYLLSYFLRIFLYANRMSIKEKIGLRIKQERMSKKLTMKALAELTDNLNISRINNYERGERTPGPEEIKQLARALE
VSPSFLMCLSDDRQGSFKTPGLGGLLPILDYKSACYPALVIQRIKEESYSEKLDLIPISSTVQKRIGKNAFALAVKDESM
APEFKFDDILIVDPDTQPNPGDYIVARLENEPEIIIRKFKQLSVSKEKPEFELVAINNDWPDVKISKELNEIFIGSVISL
FRTIKR

Sequences:

>Translated_246_residues
MRMSQYLLSYFLRIFLYANRMSIKEKIGLRIKQERMSKKLTMKALAELTDNLNISRINNYERGERTPGPEEIKQLARALE
VSPSFLMCLSDDRQGSFKTPGLGGLLPILDYKSACYPALVIQRIKEESYSEKLDLIPISSTVQKRIGKNAFALAVKDESM
APEFKFDDILIVDPDTQPNPGDYIVARLENEPEIIIRKFKQLSVSKEKPEFELVAINNDWPDVKISKELNEIFIGSVISL
FRTIKR
>Mature_246_residues
MRMSQYLLSYFLRIFLYANRMSIKEKIGLRIKQERMSKKLTMKALAELTDNLNISRINNYERGERTPGPEEIKQLARALE
VSPSFLMCLSDDRQGSFKTPGLGGLLPILDYKSACYPALVIQRIKEESYSEKLDLIPISSTVQKRIGKNAFALAVKDESM
APEFKFDDILIVDPDTQPNPGDYIVARLENEPEIIIRKFKQLSVSKEKPEFELVAINNDWPDVKISKELNEIFIGSVISL
FRTIKR

Specific function: Unknown

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28239; Mature: 28239

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMSQYLLSYFLRIFLYANRMSIKEKIGLRIKQERMSKKLTMKALAELTDNLNISRINNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHCCCEEECCCC
ERGERTPGPEEIKQLARALEVSPSFLMCLSDDRQGSFKTPGLGGLLPILDYKSACYPALV
CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH
IQRIKEESYSEKLDLIPISSTVQKRIGKNAFALAVKDESMAPEFKFDDILIVDPDTQPNP
HHHHHHHHHHCCCCEEECHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCC
GDYIVARLENEPEIIIRKFKQLSVSKEKPEFELVAINNDWPDVKISKELNEIFIGSVISL
CCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHH
FRTIKR
HHHHCC
>Mature Secondary Structure
MRMSQYLLSYFLRIFLYANRMSIKEKIGLRIKQERMSKKLTMKALAELTDNLNISRINNY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHCCCEEECCCC
ERGERTPGPEEIKQLARALEVSPSFLMCLSDDRQGSFKTPGLGGLLPILDYKSACYPALV
CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH
IQRIKEESYSEKLDLIPISSTVQKRIGKNAFALAVKDESMAPEFKFDDILIVDPDTQPNP
HHHHHHHHHHCCCCEEECHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCC
GDYIVARLENEPEIIIRKFKQLSVSKEKPEFELVAINNDWPDVKISKELNEIFIGSVISL
CCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHH
FRTIKR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA