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The map label for this gene is yfiO [C]

Identifier: 52841419

GI number: 52841419

Start: 1313842

End: 1314624

Strand: Direct

Name: yfiO [C]

Synonym: lpg1186

Alternate gene names: 52841419

Gene position: 1313842-1314624 (Clockwise)

Preceding gene: 52841418

Following gene: 52841423

Centisome position: 38.67

GC content: 40.1

Gene sequence:

>783_bases
GTGTGCTTTATGAAACGAATTCATGTGTTATTTCTTATTGGGTTAGTTGTTGGAATCTCATCGTGTACTAAATGGGGAAA
AGATGATGAGGATAATAACCCATATAAAGGCATGACAGCTAAACAGCTCTACACTGCGGCACAAACCTCTTTAAAAAAAG
AGGAATATGCTACTGCTGCCAAACAGTTGGAAGCCATGGAGTCTATGTATCCTTTTAGTGACTATACTGAAAGCTCTCAA
ATGCAGCTTATTTATGCCTATTATAAAGACGAAGATTATCCTTCTGCTGCAGCAACGGCGGAGCGCTTTATTCATCTGTA
CCCACGCGCAAAAAACGTTGATTATGCCTATTATATGAGAGGTTTGGCTAACTTCCAGCAAACACGAGGCGTATTTGCCA
AAATGCTTCCTATGGATGAATCCTGGAGGGACCCTGGAACACAAACTCAAGCACTGGTTGACTTTGCTACTTTAATTCAG
AAATTTCCTGACAGCAAATATAAAGCCAATGCTTTGCAACGTATGATTTATCTACGAAATATGTTTGCTCAGCACGAACT
CAATGTCTCTCTTTACTACTTCAAACGTAAAATGTATGTGGCTGCCATTGAACGGGCCAGTTATCTAGTGAAAAACTATC
CTCAAGCTCCCAGCGCTCAAAAGGCTTTAGTGGTAATGTACGAAGCCAATAAAGCATTAGGGCTTAACAAGGCAGCGGAG
GATGCTATGGCTGTTTACAAGGCTACTTATCATACTTCTAATATGATCAGAATTAATTCTTGA

Upstream 100 bases:

>100_bases
TAAAAGAATAATAGGTTGTTCGCAAATTAACTGGTCCTAGGTATAATGTCCCAAATTTTCCAGTTGCTGTACTTATAAAT
ACAGCAGATATAATTGATAG

Downstream 100 bases:

>100_bases
TGAGTACAAAAATTTATAGAGTTTATTCTGTCAGCTGGGTTAAGCAAGTGATGTGCAATCCACTCGTTTTCTCTTGAATC
AAGATGAGAGGGAGCTCTGT

Product: competence lipoprotein ComL

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MCFMKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMESMYPFSDYTESSQ
MQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQ
KFPDSKYKANALQRMIYLRNMFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAE
DAMAVYKATYHTSNMIRINS

Sequences:

>Translated_260_residues
MCFMKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMESMYPFSDYTESSQ
MQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQ
KFPDSKYKANALQRMIYLRNMFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAE
DAMAVYKATYHTSNMIRINS
>Mature_260_residues
MCFMKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMESMYPFSDYTESSQ
MQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQ
KFPDSKYKANALQRMIYLRNMFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAE
DAMAVYKATYHTSNMIRINS

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=235, Percent_Identity=33.1914893617021, Blast_Score=151, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29923; Mature: 29923

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFMKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KQLEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMR
HHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
GLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRN
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
MFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAE
HHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHH
DAMAVYKATYHTSNMIRINS
HHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MCFMKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KQLEAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMR
HHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH
GLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRN
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
MFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAE
HHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHH
DAMAVYKATYHTSNMIRINS
HHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8097014; 10984043 [H]