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The map label for this gene is 52841418

Identifier: 52841418

GI number: 52841418

Start: 1311080

End: 1313467

Strand: Direct

Name: 52841418

Synonym: lpg1184

Alternate gene names: NA

Gene position: 1311080-1313467 (Clockwise)

Preceding gene: 52841417

Following gene: 52841419

Centisome position: 38.59

GC content: 37.52

Gene sequence:

>2388_bases
ATGTTAACTGATGCTCAAATTCAACACGCTATTAATAATCTTAATATACTTATTGCACACTATAACTCGCCAATATCCTG
CTTTTCTTTTGACAATGAGCGAGTTACAAGGAACTGGTTTTTCAAATCTGAATCAACACATGCTACTGCCCTGAGTAATT
ATTTAAAGAAAATTATCGATGAAGTTTCAAGCGACAAAGTAGATAAGACTAATAGTTTATATTCTAGTTTGTTTATTAGC
TTACAAAATTTCCTTCATTTACAACCGAATCGGGTAATTGAAGGCTTGAATTTTAATTTAGAGAATAGTCAGTACCTGAA
ACGCAAAAACTTGATTATTAAGAGACTGGAACATTTTCATATCGAGAATCAATTCAGGGATGATCTGAAACGACATCTTC
TTCCTGAGATTCAATATGATACGTGCACTGGGCATTATACCTCGCCAGACGATGATAAAGCGCATCAACATGGCTCAGAA
GCCCAGCGAATTTTCTTCTCTACTCAATGGGAAAGATTAAAAGCCTTATGCAATTGGTTATTGGCTAAAATGGGTATTCA
TATTTTTGAAACCGCACGTTATAAAGAACATGACTATTTGGATAGTGAGGTCTATGCCAATGATCCCGCGATTGAACCAG
GGGTAAGCCCACAACAATCAGCCACTCATTACTGGATTGGCCATGCATCAAATCTAATGACCATACCGGCCCATGATTCG
CCATTGCATGTAGTCACTGATCCTGTTGAAGGTGATTTGGCTCCATTTCTATACCCGCGTATGACAAAAGAAGGGAGTTT
AATTGATGGAACTGGCAGTAAAAAATTACCCAAAATTGATATAGTAGTGATTTCTCACAATCACCATGATCATGTAAGTC
AGTCCACATTGAAGCGCCTATTAAAACAGCAACCCAAGATGGTAGTTCCGGAAGGTGACGAATCATTCTTTTTAGGCATG
GGATTTACCGATGTTGTAGGGTTGAAATGGTGGGAACAAGCAAAGATTACAGATTTCCAAGGGAATGAATTATTAAGGAT
AACTGCAGTGCCTGCCAGGCATTGGTCGGGTCGATCGCTGACCGATGCTCATTGCTCAGCATTTAATGGCTATGTGCTGC
ATGCAAATCAATTAGATGGAGATATTTATTTTGCTGGGGATACCGCGTTAATGGATGACATGTTATCACAGCCCATTTTT
GAAAAATTCAATATCGTTACCTCTATTCAACCCGGTGGTCCAGATGAGCGGCGTGAAGACATGGAGTCTACTCATCAATC
TTCTGCGGATGCAATTCTGATGCATTTTAAAATATTAGCTGCACAATATCAAAAAATGAAAGAGAAGAATGAGAGTTTAT
CTCTTGATGATTTTTTAATTGAAAATCAACATCTTAAAACTCTTTATAACCATACTGCTACTTTCAAATTAGGAAATTTA
CGTCTGAAAGATACCTATTACAGTTATCAGAGAATGGTTGCTGCATTTAGGGAAGATGCTCAATGGAGAGCTGATCATTT
ACCAAAGCATGAGCAAAAGGTTTACGATCATATTCAACTTTTGATAAGCAATATGGTTTTCAAAGATAATCAACAGCTTA
GTAATCGGCAAATTGCCGATCTGATTCTGGGCAAGGTAGTTATTCCCAAAATTGGTCAAAGACAACCACTTTATTTTAAA
GAAAAACCGATAAAGACAGAAACATTTCAATATCGTAATCTGATTACTAATCGTCGTGCTTTACTCGAGTTTGACATGTT
GCTGCAAGAATCCATTGCTGAGTCGAATGAATTCTTTAATATCAAACGACTTATTTTAAATCTGTTGCGAGCCTATCAAA
ATCCCTGGCATGCCTTTTTTTCCCGAACGCATCTTGGAGTAGGTAATTACGAGCAAGATATCCGCAATTGCCAGAGTAAT
AGCGATTTACTCGCTGTATTAAACCATATGGAAAGAAATCTAGGCAAAAGAAATCCACATGGCCACATGCAGAGTTTGAT
TTATTATGCTAAATGGGTAATTGATTTTTCCAATAAATATCAACATGAAACTCTAATGAAATTTAAAGAATATTTTGCTT
GCCAACAGATAAGAAAATTGGCTGATCAAGAGATTCATCATGCTGGCCTTATAGTGGGTTTCGGAGATCGCCAAGCGAAG
CAACAGCGGTTTAAAGTACTTTCAAACGAATTGGCTGATTTGCCTGAGGATGTTGCAGAATATAGAAAAGCTATCGATAA
TTGGCTTGCCACACGAGTTAATGATGGACAATCTACCCAACAATTGCTTAGTGAAAATCGCTCATCTGTTTTTGCAAAAA
AAGTAACCCGTGGAGAAAGCACCGTGCTCCATATCAAAACAACTCTTGATCTGGCAGTATCAAGTTAA

Upstream 100 bases:

>100_bases
AAATCATAAAAAATATTGAGAATTCAATGAAGCAGACATTTATAACTCTTGGCAAAATATAGCAAACGAATCAGCTGATT
GGATAATACGGTAAAAAAAT

Downstream 100 bases:

>100_bases
TAGATACAATGACTTTAGTCTTTTGTATTAATGGGTTGGATGTCATTCACTTACTTTTTGTACTTGAAGAATAGAATAAC
GCTAAAGTGAAATTGGTTGT

Product: outer membrane protein RomA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MLTDAQIQHAINNLNILIAHYNSPISCFSFDNERVTRNWFFKSESTHATALSNYLKKIIDEVSSDKVDKTNSLYSSLFIS
LQNFLHLQPNRVIEGLNFNLENSQYLKRKNLIIKRLEHFHIENQFRDDLKRHLLPEIQYDTCTGHYTSPDDDKAHQHGSE
AQRIFFSTQWERLKALCNWLLAKMGIHIFETARYKEHDYLDSEVYANDPAIEPGVSPQQSATHYWIGHASNLMTIPAHDS
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDIVVISHNHHDHVSQSTLKRLLKQQPKMVVPEGDESFFLGM
GFTDVVGLKWWEQAKITDFQGNELLRITAVPARHWSGRSLTDAHCSAFNGYVLHANQLDGDIYFAGDTALMDDMLSQPIF
EKFNIVTSIQPGGPDERREDMESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLIENQHLKTLYNHTATFKLGNL
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKDNQQLSNRQIADLILGKVVIPKIGQRQPLYFK
EKPIKTETFQYRNLITNRRALLEFDMLLQESIAESNEFFNIKRLILNLLRAYQNPWHAFFSRTHLGVGNYEQDIRNCQSN
SDLLAVLNHMERNLGKRNPHGHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
QQRFKVLSNELADLPEDVAEYRKAIDNWLATRVNDGQSTQQLLSENRSSVFAKKVTRGESTVLHIKTTLDLAVSS

Sequences:

>Translated_795_residues
MLTDAQIQHAINNLNILIAHYNSPISCFSFDNERVTRNWFFKSESTHATALSNYLKKIIDEVSSDKVDKTNSLYSSLFIS
LQNFLHLQPNRVIEGLNFNLENSQYLKRKNLIIKRLEHFHIENQFRDDLKRHLLPEIQYDTCTGHYTSPDDDKAHQHGSE
AQRIFFSTQWERLKALCNWLLAKMGIHIFETARYKEHDYLDSEVYANDPAIEPGVSPQQSATHYWIGHASNLMTIPAHDS
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDIVVISHNHHDHVSQSTLKRLLKQQPKMVVPEGDESFFLGM
GFTDVVGLKWWEQAKITDFQGNELLRITAVPARHWSGRSLTDAHCSAFNGYVLHANQLDGDIYFAGDTALMDDMLSQPIF
EKFNIVTSIQPGGPDERREDMESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLIENQHLKTLYNHTATFKLGNL
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKDNQQLSNRQIADLILGKVVIPKIGQRQPLYFK
EKPIKTETFQYRNLITNRRALLEFDMLLQESIAESNEFFNIKRLILNLLRAYQNPWHAFFSRTHLGVGNYEQDIRNCQSN
SDLLAVLNHMERNLGKRNPHGHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
QQRFKVLSNELADLPEDVAEYRKAIDNWLATRVNDGQSTQQLLSENRSSVFAKKVTRGESTVLHIKTTLDLAVSS
>Mature_795_residues
MLTDAQIQHAINNLNILIAHYNSPISCFSFDNERVTRNWFFKSESTHATALSNYLKKIIDEVSSDKVDKTNSLYSSLFIS
LQNFLHLQPNRVIEGLNFNLENSQYLKRKNLIIKRLEHFHIENQFRDDLKRHLLPEIQYDTCTGHYTSPDDDKAHQHGSE
AQRIFFSTQWERLKALCNWLLAKMGIHIFETARYKEHDYLDSEVYANDPAIEPGVSPQQSATHYWIGHASNLMTIPAHDS
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDIVVISHNHHDHVSQSTLKRLLKQQPKMVVPEGDESFFLGM
GFTDVVGLKWWEQAKITDFQGNELLRITAVPARHWSGRSLTDAHCSAFNGYVLHANQLDGDIYFAGDTALMDDMLSQPIF
EKFNIVTSIQPGGPDERREDMESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLIENQHLKTLYNHTATFKLGNL
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKDNQQLSNRQIADLILGKVVIPKIGQRQPLYFK
EKPIKTETFQYRNLITNRRALLEFDMLLQESIAESNEFFNIKRLILNLLRAYQNPWHAFFSRTHLGVGNYEQDIRNCQSN
SDLLAVLNHMERNLGKRNPHGHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
QQRFKVLSNELADLPEDVAEYRKAIDNWLATRVNDGQSTQQLLSENRSSVFAKKVTRGESTVLHIKTTLDLAVSS

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17543102, Length=231, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17543100, Length=229, Percent_Identity=28.82096069869, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25148824, Length=235, Percent_Identity=28.5106382978723, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17543104, Length=223, Percent_Identity=28.6995515695067, Blast_Score=68, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6325154, Length=204, Percent_Identity=31.8627450980392, Blast_Score=94, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91975; Mature: 91975

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDAQIQHAINNLNILIAHYNSPISCFSFDNERVTRNWFFKSESTHATALSNYLKKIID
CCCHHHHHHHHCCCEEEEEECCCCEEEEECCCCEEEHEEEECCCCCHHHHHHHHHHHHHH
EVSSDKVDKTNSLYSSLFISLQNFLHLQPNRVIEGLNFNLENSQYLKRKNLIIKRLEHFH
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IENQFRDDLKRHLLPEIQYDTCTGHYTSPDDDKAHQHGSEAQRIFFSTQWERLKALCNWL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAKMGIHIFETARYKEHDYLDSEVYANDPAIEPGVSPQQSATHYWIGHASNLMTIPAHDS
HHHHCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCC
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDIVVISHNHHDHVSQSTLKRL
CCEEEECCCCCCCCHHHCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
LKQQPKMVVPEGDESFFLGMGFTDVVGLKWWEQAKITDFQGNELLRITAVPARHWSGRSL
HHHCCCEEECCCCCCEEEECCHHHHHCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC
TDAHCSAFNGYVLHANQLDGDIYFAGDTALMDDMLSQPIFEKFNIVTSIQPGGPDERRED
CHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHCCHHHHHHCEEEEECCCCCCHHHHH
MESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLIENQHLKTLYNHTATFKLGNL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCEEEECCE
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKDNQQLSNRQIAD
EEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LILGKVVIPKIGQRQPLYFKEKPIKTETFQYRNLITNRRALLEFDMLLQESIAESNEFFN
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKRLILNLLRAYQNPWHAFFSRTHLGVGNYEQDIRNCQSNSDLLAVLNHMERNLGKRNPH
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
GHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
QQRFKVLSNELADLPEDVAEYRKAIDNWLATRVNDGQSTQQLLSENRSSVFAKKVTRGES
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCC
TVLHIKTTLDLAVSS
EEEEEEEEEEEEECC
>Mature Secondary Structure
MLTDAQIQHAINNLNILIAHYNSPISCFSFDNERVTRNWFFKSESTHATALSNYLKKIID
CCCHHHHHHHHCCCEEEEEECCCCEEEEECCCCEEEHEEEECCCCCHHHHHHHHHHHHHH
EVSSDKVDKTNSLYSSLFISLQNFLHLQPNRVIEGLNFNLENSQYLKRKNLIIKRLEHFH
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IENQFRDDLKRHLLPEIQYDTCTGHYTSPDDDKAHQHGSEAQRIFFSTQWERLKALCNWL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAKMGIHIFETARYKEHDYLDSEVYANDPAIEPGVSPQQSATHYWIGHASNLMTIPAHDS
HHHHCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCC
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDIVVISHNHHDHVSQSTLKRL
CCEEEECCCCCCCCHHHCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
LKQQPKMVVPEGDESFFLGMGFTDVVGLKWWEQAKITDFQGNELLRITAVPARHWSGRSL
HHHCCCEEECCCCCCEEEECCHHHHHCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC
TDAHCSAFNGYVLHANQLDGDIYFAGDTALMDDMLSQPIFEKFNIVTSIQPGGPDERRED
CHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHCCHHHHHHCEEEEECCCCCCHHHHH
MESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLIENQHLKTLYNHTATFKLGNL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCEEEECCE
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKDNQQLSNRQIAD
EEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LILGKVVIPKIGQRQPLYFKEKPIKTETFQYRNLITNRRALLEFDMLLQESIAESNEFFN
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKRLILNLLRAYQNPWHAFFSRTHLGVGNYEQDIRNCQSNSDLLAVLNHMERNLGKRNPH
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
GHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
QQRFKVLSNELADLPEDVAEYRKAIDNWLATRVNDGQSTQQLLSENRSSVFAKKVTRGES
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCC
TVLHIKTTLDLAVSS
EEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA