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The map label for this gene is 52841376

Identifier: 52841376

GI number: 52841376

Start: 1257167

End: 1257397

Strand: Reverse

Name: 52841376

Synonym: lpg1142

Alternate gene names: NA

Gene position: 1257397-1257167 (Counterclockwise)

Preceding gene: 52841377

Following gene: 52841375

Centisome position: 37.01

GC content: 34.2

Gene sequence:

>231_bases
ATGGGAGAGAAACAATATGTTGTTTATATATTAGCTAGTAAGGCATATGGGACCCTTTATACCAGGATTACCAGTAATCT
TGTGCAACGAATATATCAGCACAAAAAAGGTTTGACCGAAGGATTTACTAAAAGATACAACGTCCATCGGTTAGTTTATT
ATGAAATTCACACCGATGTTTATGAAGCAATAACCAGAGAAAAATGTATTAAGAAATGGAACAGGCAATGA

Upstream 100 bases:

>100_bases
CCACCTAAACAAGATGAAGTAACTCGCTGATATACAATAAAAATCATATAATCTCGATCGCAAAATTGCGGCAGGATATA
GCAACCAACCAGGATGAATA

Downstream 100 bases:

>100_bases
AAATAAACTTGATCGAACAAAAAAATCCTCAGCGGCTTGACCTGAGCATTGGATTATGTTGATAGATGGTTGCCCGCCTA
CGCGGGCATGACTGATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Containing A URI Domain; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; Excinuclease ABC C Subunit-Like Protein; GIY-YIG Catalytic Domain Protein; Endonuclease Protein

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MGEKQYVVYILASKAYGTLYTRITSNLVQRIYQHKKGLTEGFTKRYNVHRLVYYEIHTDVYEAITREKCIKKWNRQ

Sequences:

>Translated_76_residues
MGEKQYVVYILASKAYGTLYTRITSNLVQRIYQHKKGLTEGFTKRYNVHRLVYYEIHTDVYEAITREKCIKKWNRQ
>Mature_75_residues
GEKQYVVYILASKAYGTLYTRITSNLVQRIYQHKKGLTEGFTKRYNVHRLVYYEIHTDVYEAITREKCIKKWNRQ

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9207; Mature: 9076

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKQYVVYILASKAYGTLYTRITSNLVQRIYQHKKGLTEGFTKRYNVHRLVYYEIHTDV
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEHHHHH
YEAITREKCIKKWNRQ
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GEKQYVVYILASKAYGTLYTRITSNLVQRIYQHKKGLTEGFTKRYNVHRLVYYEIHTDV
CCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEHHHHH
YEAITREKCIKKWNRQ
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA