| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
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The map label for this gene is chiD [H]
Identifier: 52841350
GI number: 52841350
Start: 1223381
End: 1225732
Strand: Direct
Name: chiD [H]
Synonym: lpg1116
Alternate gene names: 52841350
Gene position: 1223381-1225732 (Clockwise)
Preceding gene: 52841344
Following gene: 52841353
Centisome position: 36.01
GC content: 40.56
Gene sequence:
>2352_bases TTGATGCGATATTTATTATTACTGCCAGGTGTTTTAATTGCAATTGTGACAAGTGTCAATGCCAATACCTCTTTAAAACC CTCAATTGCCCAGCCTACAGCCTGTGTAAACTCACTTTTTACAGCAACGGGAAATCAACACTGGAAATCAATCGTATTAA AGTTAACCAATAATTGCAATCAGGCAGTCGATTTTCAAAATTCAACTGTCTCCTTTCAAACAACAGCAGCTTTAAATACC TCTTTTTGGGGGGATTTTTCTCCTTTATCTTACCCGGATAATGCTTTAAATATTTCTTCTCAACCTCAATCTGGCGGAAA CTATCTAGCCACTTTAAACCTGCATTTTCCCAGCTATCCGGGTGCTAATAGCAAGTTACCTGTTGGAAGTTCTATTTCAA TTAAATATGGGGCAGTCACTGATAGTCATATCGAGGGAACGGCTAATGTTTATTTAAGCACAACGGTTGAAACAGGAAGC ATCCAATTAATCAATGCTGCTGCAAAACCAACAAATGTGTCACAAGGATATGCATTAGTTCATGTCACAATGAATGGTCA ATCAGTCAGTGATGTGCAATTACCATGGGAAACTTCAAAGACTCTATCTGGGTTTGCTGCAGGTAATTATGCTATTTCTG CTGAAACGGTTACTGACAGTAATGGCAATCTTTATCTGGGACAGGCCAATCCCAGCATGGTGAATGTGATTGCAAACCAA ACAACGAGCTCGACTATTAATTATGCTCGGGTACAAGAGACAGGCAAGATCAAGATCCATGTGCAGAACCTCCCTGGCGA ATTAAGCAACTACAATGAAAATCCAACTGTTCTAATTACCCAGAGTCAATCAGGAAATTCACGCTCACAGCATGCCGTTT GGGGGAACACAACGACTGTTGCTGAGTTGAAAGAGGGGAGTAGTTACCAATTCTCAACTCCTGCAATTCAATATAACGAT TACAATTGCTGGCCCACTTTCACACCATCTTCCTTAGTGGCAAGTGCTGCAAATGTTCCAACTACCAATTTAACCTATCA GTGTGCCCAGATTGTGAAAGATAATGTGACAATTAATGTCAGTGGCGCTCCATCCTCCCTGGCTTCATTGAAAATTATTT TAACTCCCAACGATGGTTCACAAACAGTAGAACAGACAATAGATTTGGCCAATGGTGTTGGTTCATCTGCCATTTCTTTA ACTGACGGGGGTATTTATACACTTTCAAGTGAAGGTGTTCCCGGCTATACAGTACAATTTTCGCCCCAACCTTTAACAGC AACAGAAAATGCAACAGTAAACATCACTTTATCTCCGGTAACCGCTGCAAAAGGGCGTATTATTGGTTACGTACCGGGAT GGAAAACTCCACCTGCCGCTCAAGAGTTGGCTAGCGCGGGTTATACTCATGTCATGATTGCTTTCGGCGTATTTAGTACC AATACTCCGGGTGTTATTGTTCCTGCTTTTGAAACAATAACCAAAGAATATATTCAGTCTCTTCATCAAGTCGGGATTAA AGTTATTCTTTCTTTAGGTGGTGCGTTAACCAGTATTCCCAATACAACAGTAGATTTTCACCAGGTTTTAGTAGCTTCTT CTTCACCAGAGGCATTTAAACAAACATTTATCAACTCTTTAAAGGAGTTAATTTCTCAATATGATTTTGATGGGTTTGAT ATAGATATTGAGCATGGTATTAACGCTGGCGGTTCCTTTTCTCAACCACAAGGTGACATTGCTGTCTTAGCAAGCATTAT TAATACGATGTACAGTCAAAATCCTTCTTTGCTGATTACTCTGACACCTCAAGTGGCTAATATTGCTGCAACAAGCGGTT TCGACCAAACCTGGGGGAATTATGCCTCTTTAACTATGCAAACTCATCAGTCATTGGCGTGGGTAGGCATCCAACTCTAC AATACAGGATGTGCTTTTGGTATTGATCAGGTATGTTATGGCCCTACACCAACTGATACGCCTGATTTTTCGGTAGCCAT GGCTACCGATTTATTGGAAAATTGGCCAGCAACCGTCAATGGACGTCCTACAGGATTTCAACCTTATGTTAGCTATTTAA GACCTTCCCAAATTGTAATTGGTTATCCCTCCCCAAATTCTAATGGTGGCAGTGACGGTTCACCAGTCACTCCGACAACG ACAATCAAACGGGCTATTCAGTGCCTTAAGACAGCAATTGCCAGTAATACCAGTTGTGGTGCTTACGCTCCACCAAGAGC TTATGGAAATATCGGTGGTGTATTTAACTGGGAAGTGACTTATGATAAAAACAATCAATTCAAATTTGCAAAAGAATTGA AAAATTGTGTTATTAATGGTGTTTGTGAGTAA
Upstream 100 bases:
>100_bases AGGCTAATTGTAAAAAAACTGACAATTTTCATATAGCTTATTATTAAATAAGAAAAAATGATGATAGATTAGTTTTTTTC CAATCACAAATGAGGAGGGA
Downstream 100 bases:
>100_bases TTCATTTGACCAAGTCAGGCTTTAGAGCCTGACACTTATTAATTAGAGAGTTTGGTGCAGATTCTTTCCATATCGCGATC ACGCAAGTGTCTATCTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 783; Mature: 783
Protein sequence:
>783_residues MMRYLLLLPGVLIAIVTSVNANTSLKPSIAQPTACVNSLFTATGNQHWKSIVLKLTNNCNQAVDFQNSTVSFQTTAALNT SFWGDFSPLSYPDNALNISSQPQSGGNYLATLNLHFPSYPGANSKLPVGSSISIKYGAVTDSHIEGTANVYLSTTVETGS IQLINAAAKPTNVSQGYALVHVTMNGQSVSDVQLPWETSKTLSGFAAGNYAISAETVTDSNGNLYLGQANPSMVNVIANQ TTSSTINYARVQETGKIKIHVQNLPGELSNYNENPTVLITQSQSGNSRSQHAVWGNTTTVAELKEGSSYQFSTPAIQYND YNCWPTFTPSSLVASAANVPTTNLTYQCAQIVKDNVTINVSGAPSSLASLKIILTPNDGSQTVEQTIDLANGVGSSAISL TDGGIYTLSSEGVPGYTVQFSPQPLTATENATVNITLSPVTAAKGRIIGYVPGWKTPPAAQELASAGYTHVMIAFGVFST NTPGVIVPAFETITKEYIQSLHQVGIKVILSLGGALTSIPNTTVDFHQVLVASSSPEAFKQTFINSLKELISQYDFDGFD IDIEHGINAGGSFSQPQGDIAVLASIINTMYSQNPSLLITLTPQVANIAATSGFDQTWGNYASLTMQTHQSLAWVGIQLY NTGCAFGIDQVCYGPTPTDTPDFSVAMATDLLENWPATVNGRPTGFQPYVSYLRPSQIVIGYPSPNSNGGSDGSPVTPTT TIKRAIQCLKTAIASNTSCGAYAPPRAYGNIGGVFNWEVTYDKNNQFKFAKELKNCVINGVCE
Sequences:
>Translated_783_residues MMRYLLLLPGVLIAIVTSVNANTSLKPSIAQPTACVNSLFTATGNQHWKSIVLKLTNNCNQAVDFQNSTVSFQTTAALNT SFWGDFSPLSYPDNALNISSQPQSGGNYLATLNLHFPSYPGANSKLPVGSSISIKYGAVTDSHIEGTANVYLSTTVETGS IQLINAAAKPTNVSQGYALVHVTMNGQSVSDVQLPWETSKTLSGFAAGNYAISAETVTDSNGNLYLGQANPSMVNVIANQ TTSSTINYARVQETGKIKIHVQNLPGELSNYNENPTVLITQSQSGNSRSQHAVWGNTTTVAELKEGSSYQFSTPAIQYND YNCWPTFTPSSLVASAANVPTTNLTYQCAQIVKDNVTINVSGAPSSLASLKIILTPNDGSQTVEQTIDLANGVGSSAISL TDGGIYTLSSEGVPGYTVQFSPQPLTATENATVNITLSPVTAAKGRIIGYVPGWKTPPAAQELASAGYTHVMIAFGVFST NTPGVIVPAFETITKEYIQSLHQVGIKVILSLGGALTSIPNTTVDFHQVLVASSSPEAFKQTFINSLKELISQYDFDGFD IDIEHGINAGGSFSQPQGDIAVLASIINTMYSQNPSLLITLTPQVANIAATSGFDQTWGNYASLTMQTHQSLAWVGIQLY NTGCAFGIDQVCYGPTPTDTPDFSVAMATDLLENWPATVNGRPTGFQPYVSYLRPSQIVIGYPSPNSNGGSDGSPVTPTT TIKRAIQCLKTAIASNTSCGAYAPPRAYGNIGGVFNWEVTYDKNNQFKFAKELKNCVINGVCE >Mature_783_residues MMRYLLLLPGVLIAIVTSVNANTSLKPSIAQPTACVNSLFTATGNQHWKSIVLKLTNNCNQAVDFQNSTVSFQTTAALNT SFWGDFSPLSYPDNALNISSQPQSGGNYLATLNLHFPSYPGANSKLPVGSSISIKYGAVTDSHIEGTANVYLSTTVETGS IQLINAAAKPTNVSQGYALVHVTMNGQSVSDVQLPWETSKTLSGFAAGNYAISAETVTDSNGNLYLGQANPSMVNVIANQ TTSSTINYARVQETGKIKIHVQNLPGELSNYNENPTVLITQSQSGNSRSQHAVWGNTTTVAELKEGSSYQFSTPAIQYND YNCWPTFTPSSLVASAANVPTTNLTYQCAQIVKDNVTINVSGAPSSLASLKIILTPNDGSQTVEQTIDLANGVGSSAISL TDGGIYTLSSEGVPGYTVQFSPQPLTATENATVNITLSPVTAAKGRIIGYVPGWKTPPAAQELASAGYTHVMIAFGVFST NTPGVIVPAFETITKEYIQSLHQVGIKVILSLGGALTSIPNTTVDFHQVLVASSSPEAFKQTFINSLKELISQYDFDGFD IDIEHGINAGGSFSQPQGDIAVLASIINTMYSQNPSLLITLTPQVANIAATSGFDQTWGNYASLTMQTHQSLAWVGIQLY NTGCAFGIDQVCYGPTPTDTPDFSVAMATDLLENWPATVNGRPTGFQPYVSYLRPSQIVIGYPSPNSNGGSDGSPVTPTT TIKRAIQCLKTAIASNTSCGAYAPPRAYGNIGGVFNWEVTYDKNNQFKFAKELKNCVINGVCE
Specific function: Unknown
COG id: COG3469
COG function: function code G; Chitinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fibronectin type-III domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003610 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR001223 - InterPro: IPR001579 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR015520 [H]
Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]
EC number: =3.2.1.14 [H]
Molecular weight: Translated: 83099; Mature: 83099
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS01095 CHITINASE_18
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRYLLLLPGVLIAIVTSVNANTSLKPSIAQPTACVNSLFTATGNQHWKSIVLKLTNNCN CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCC QAVDFQNSTVSFQTTAALNTSFWGDFSPLSYPDNALNISSQPQSGGNYLATLNLHFPSYP CEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC GANSKLPVGSSISIKYGAVTDSHIEGTANVYLSTTVETGSIQLINAAAKPTNVSQGYALV CCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCEEEE HVTMNGQSVSDVQLPWETSKTLSGFAAGNYAISAETVTDSNGNLYLGQANPSMVNVIANQ EEEECCCCCCEEECCCCCCCCCCCEECCCEEEEEEEEECCCCCEEEECCCCCEEEEEECC TTSSTINYARVQETGKIKIHVQNLPGELSNYNENPTVLITQSQSGNSRSQHAVWGNTTTV CCCCCEEEEEEECCCEEEEEEECCCCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEE AELKEGSSYQFSTPAIQYNDYNCWPTFTPSSLVASAANVPTTNLTYQCAQIVKDNVTINV EECCCCCCEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEE SGAPSSLASLKIILTPNDGSQTVEQTIDLANGVGSSAISLTDGGIYTLSSEGVPGYTVQF CCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCEEEEE SPQPLTATENATVNITLSPVTAAKGRIIGYVPGWKTPPAAQELASAGYTHVMIAFGVFST CCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHCCCEEEEEEEEEECC NTPGVIVPAFETITKEYIQSLHQVGIKVILSLGGALTSIPNTTVDFHQVLVASSSPEAFK CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCCHHHH QTFINSLKELISQYDFDGFDIDIEHGINAGGSFSQPQGDIAVLASIINTMYSQNPSLLIT HHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE LTPQVANIAATSGFDQTWGNYASLTMQTHQSLAWVGIQLYNTGCAFGIDQVCYGPTPTDT ECCCHHEEEECCCCCCCCCCEEEEEEHHCCCEEEEEEEEEECCCCCCCHHHCCCCCCCCC PDFSVAMATDLLENWPATVNGRPTGFQPYVSYLRPSQIVIGYPSPNSNGGSDGSPVTPTT CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHH TIKRAIQCLKTAIASNTSCGAYAPPRAYGNIGGVFNWEVTYDKNNQFKFAKELKNCVING HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC VCE CCC >Mature Secondary Structure MMRYLLLLPGVLIAIVTSVNANTSLKPSIAQPTACVNSLFTATGNQHWKSIVLKLTNNCN CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCC QAVDFQNSTVSFQTTAALNTSFWGDFSPLSYPDNALNISSQPQSGGNYLATLNLHFPSYP CEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC GANSKLPVGSSISIKYGAVTDSHIEGTANVYLSTTVETGSIQLINAAAKPTNVSQGYALV CCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCEEEE HVTMNGQSVSDVQLPWETSKTLSGFAAGNYAISAETVTDSNGNLYLGQANPSMVNVIANQ EEEECCCCCCEEECCCCCCCCCCCEECCCEEEEEEEEECCCCCEEEECCCCCEEEEEECC TTSSTINYARVQETGKIKIHVQNLPGELSNYNENPTVLITQSQSGNSRSQHAVWGNTTTV CCCCCEEEEEEECCCEEEEEEECCCCHHHCCCCCCEEEEEECCCCCCCCCEEECCCCEEE AELKEGSSYQFSTPAIQYNDYNCWPTFTPSSLVASAANVPTTNLTYQCAQIVKDNVTINV EECCCCCCEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEE SGAPSSLASLKIILTPNDGSQTVEQTIDLANGVGSSAISLTDGGIYTLSSEGVPGYTVQF CCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCEEEEE SPQPLTATENATVNITLSPVTAAKGRIIGYVPGWKTPPAAQELASAGYTHVMIAFGVFST CCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHCCCEEEEEEEEEECC NTPGVIVPAFETITKEYIQSLHQVGIKVILSLGGALTSIPNTTVDFHQVLVASSSPEAFK CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCCHHHH QTFINSLKELISQYDFDGFDIDIEHGINAGGSFSQPQGDIAVLASIINTMYSQNPSLLIT HHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE LTPQVANIAATSGFDQTWGNYASLTMQTHQSLAWVGIQLYNTGCAFGIDQVCYGPTPTDT ECCCHHEEEECCCCCCCCCCEEEEEEHHCCCEEEEEEEEEECCCCCCCHHHCCCCCCCCC PDFSVAMATDLLENWPATVNGRPTGFQPYVSYLRPSQIVIGYPSPNSNGGSDGSPVTPTT CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHH TIKRAIQCLKTAIASNTSCGAYAPPRAYGNIGGVFNWEVTYDKNNQFKFAKELKNCVING HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC VCE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1729234 [H]