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The map label for this gene is 52841334

Identifier: 52841334

GI number: 52841334

Start: 1203181

End: 1203783

Strand: Direct

Name: 52841334

Synonym: lpg1100

Alternate gene names: NA

Gene position: 1203181-1203783 (Clockwise)

Preceding gene: 52841333

Following gene: 52841335

Centisome position: 35.41

GC content: 34.66

Gene sequence:

>603_bases
ATGAAAAAAAGCATAGAACGCTCTTCTGATACCCTTTTAGAGATCGCAAGTCATCAGGAGTTAAAGGGGGAAGTTACTTA
TCAACGTATTTTGCAAGTGCTTGGAGAGCGTGCCTTTGGAATTGTGCTTTTATTTTTTGCGTTGCCTAGTGCGCTGCCTT
TTTCATTTATTCCTGGTATCTCCCTGATTTTTAGTGTTCCAATATTATTATTTGCATTTCAAATGGTTTTTGCCAGAAAA
ACAATGTGGCTACCAAAAATTATTGCGGAACGAACCATTCACCAGGAAACAATGGCCAAGTTTATACATAATACCGTTCC
TTACTTAATTAAAATTGAATATTTTTTAAAACCCAGATGGTTGTTTATGACTTCCCGCTTTATGGAAATAATCCATGGGA
TTGTTATTTTCTTCCTTGCCCTATTATTGATGTTACCAATTCCATTTAGTAATTTTATTTTTGCTACGTTGTTAATTATT
TTTAGCTTGGGATTAATAGAAAAAGATGGATTATTTCTCATTATTGGGTATCTAGGGGTTGTGATTTATGCAAACTTTGT
CTATCTGTTTGTCTTGACGGCGGTGAAGCATTTGTTTGGTTGA

Upstream 100 bases:

>100_bases
TGCAGAGTTAGAGAAAGTGTGAGCTTTAAAAATTCTTAAGGTAAAAATTTTCCTCAAACAGTTGGTAAATTGATGCTATA
TATTTTGACTTGGATTTTTT

Downstream 100 bases:

>100_bases
TTGAAAGCTTGTGTTACTAACCATTAGAGTTCACTTTTTTCATTATAGTTGAATTAACCATATGTAAATAAATAAAAAAT
TCCACTTTAATCACTCGGAA

Product: proton transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKKSIERSSDTLLEIASHQELKGEVTYQRILQVLGERAFGIVLLFFALPSALPFSFIPGISLIFSVPILLFAFQMVFARK
TMWLPKIIAERTIHQETMAKFIHNTVPYLIKIEYFLKPRWLFMTSRFMEIIHGIVIFFLALLLMLPIPFSNFIFATLLII
FSLGLIEKDGLFLIIGYLGVVIYANFVYLFVLTAVKHLFG

Sequences:

>Translated_200_residues
MKKSIERSSDTLLEIASHQELKGEVTYQRILQVLGERAFGIVLLFFALPSALPFSFIPGISLIFSVPILLFAFQMVFARK
TMWLPKIIAERTIHQETMAKFIHNTVPYLIKIEYFLKPRWLFMTSRFMEIIHGIVIFFLALLLMLPIPFSNFIFATLLII
FSLGLIEKDGLFLIIGYLGVVIYANFVYLFVLTAVKHLFG
>Mature_200_residues
MKKSIERSSDTLLEIASHQELKGEVTYQRILQVLGERAFGIVLLFFALPSALPFSFIPGISLIFSVPILLFAFQMVFARK
TMWLPKIIAERTIHQETMAKFIHNTVPYLIKIEYFLKPRWLFMTSRFMEIIHGIVIFFLALLLMLPIPFSNFIFATLLII
FSLGLIEKDGLFLIIGYLGVVIYANFVYLFVLTAVKHLFG

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 23043; Mature: 23043

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSIERSSDTLLEIASHQELKGEVTYQRILQVLGERAFGIVLLFFALPSALPFSFIPGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLIFSVPILLFAFQMVFARKTMWLPKIIAERTIHQETMAKFIHNTVPYLIKIEYFLKPRW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
LFMTSRFMEIIHGIVIFFLALLLMLPIPFSNFIFATLLIIFSLGLIEKDGLFLIIGYLGV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VIYANFVYLFVLTAVKHLFG
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKSIERSSDTLLEIASHQELKGEVTYQRILQVLGERAFGIVLLFFALPSALPFSFIPGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLIFSVPILLFAFQMVFARKTMWLPKIIAERTIHQETMAKFIHNTVPYLIKIEYFLKPRW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
LFMTSRFMEIIHGIVIFFLALLLMLPIPFSNFIFATLLIIFSLGLIEKDGLFLIIGYLGV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VIYANFVYLFVLTAVKHLFG
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]