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The map label for this gene is phbC

Identifier: 52841331

GI number: 52841331

Start: 1199936

End: 1201723

Strand: Direct

Name: phbC

Synonym: lpg1097

Alternate gene names: 52841331

Gene position: 1199936-1201723 (Clockwise)

Preceding gene: 52841330

Following gene: 52841332

Centisome position: 35.32

GC content: 43.12

Gene sequence:

>1788_bases
ATGAATGGATTGGAAAAACAATGTTGTCCCAAAGACGTCATACTGACTCAACAGGAAAAGGCTTCAGAAAGTTTGAGCGT
TTGTTGCGCTCCTAGTATTTTAGGTGCTTCAGATAGTTTCTTCTCTTTCTTCCATAAGCTATTTCAAGCCAATCTTGCTA
AAATGACATTAGGTATTAGTCCTGCAGCGTTGGGCTCGTCTTACTCCACCTGGCTTTGGCAATTGGCGCAATCTCCAGAG
GTCTTATGGGAGCTTGCCCTTTATCCATTCTTGCATGCCAATGACTGCATTAACAATATTATTTGCGTTGAGCGTGCTGC
TGATGGTAAAGACGTGCGTTTTAAAAAGGATAGTTGGCAGCCCATGCCTTGGCGTTTACTGGCGGAAGGATTTTTGCAGG
TAGAAGATTGGTGGCGACGTGCTACAAATATCCCAGGATTACCCCGGCAGGTGGAGCGAACAGTTTCGTTTTGGGTACGC
CAATGTCTTGATTCCGTGTCTCCTTCTAATTTTGTTTGGTCCAATCCCGATTTATTTCATGAAGCCATTCGCACCAACGG
GCTTAATCTCCTCAAAGGCAGTCAAATAGCAATGGAAGATTGGTTAGAAAAGCTAACTGGTGCACCACCCACAGGTTCTG
AGAATTTTATCCCGGGTAAAGACGTGGCTGTGACAGCAGGACGTGTGGTATTTCAAAATCATTTAATTGAACTCATTCAA
TATGAAGCCCAGACCAAGACAGTGTACAAAGAACCCATATTGATACTGCCTGCTTGGATTATGAAATACTATATTCTTGA
TTTATCCCCACATAACTCTTTAGTGAAGTGGCTCGTAAAACAAGGTCACACCGTATTTATCATTTCATGGCGTAATCCAG
ATAAAGAGGACTGTGATTTGGGAATGGACGATTATTATCGTCTTGGTGCCATGGCGGCCATTGATATGGTCTCTACCATT
CTACCAGAAACTAAAATCAATCTGATGGGCTATTGTTTAGGCGGTACCTTGGCCATGATTACGGCGTCTATGATGGGAAG
ATATGAGGATGAACGTTTAAATTGCCTCACGCTACTTGCGGCCCAAGGGGATTTTAGTGAAGCTGGCGAATTAATGCTCT
TTGTGAATGAAAGTCAGGTGGATTTCCTTAAAAGTATGATGTGGGAACAAGGTTATCTGGACACTAAGCAAATGGCTGGT
TCTTTCCAGATGCTGCGGGCATATGACTTAATCTGGTCTAAAATGGTGCAAGACTATATGCATGGCATGCGTCGTGGGAT
GATTGATTTAACAGCCTGGAATGCTGATGCCACAAGGATGCCTTATAAAATGCACAGTGAATACCTTGAAAAATTGTTCT
TAAACAATGATTTTGCCGAGGGGCGGTATATGGTGGAAGGAAAATCCGTGGCAGCTGAAAATATTCAGTGTCCTATTTTT
GCTGTAAGTACTAAAAAAGACCATGTAGCACCTTGGCAGTCGGTATATAAAATTCATCTTATGACAGAGGAGAATGTGAC
TTTTGTCCTTACAGGTGGCGGGCATAACGCAGGTATCATTAGTGAGCCAGGTCATTCTGGTCATGCTTACCATGTTCATG
AGCGCAAGAAAGGCGATGCTTACTTAAATCCCACGAATTGGCTTGAAATTGCAGAAAAACGAGAAGGCTCTTGGTGGCGA
GAATGGCATGATTGGTTAGTGCAACAGTCAACCAAAAAACGCATTCTACCACCTGTATTGAATACATCACTTCCGTCAGC
TCCTGGAACCTATGTGTTGCAGAAATAG

Upstream 100 bases:

>100_bases
TGGAAGATTATCCAGAATACGTTACACTTATTTAAAGATAAGGTGGATTTAAAAATATCTCAACCTATATTTTGTTTCAT
AATGCCAAGGATATCGGCCC

Downstream 100 bases:

>100_bases
AAGTGAATGGGTATGGCTAAGAAATTCTTGAAGAGCGTGATCTTTAATGACTGGCAGTAGGTAGTCAATGAACTTTACGC
AAAACTCTGGTGTAAAATGA

Product: polyhydroxyalkanoic synthase

Products: NA

Alternate protein names: PHA polymerase; PHA synthase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MNGLEKQCCPKDVILTQQEKASESLSVCCAPSILGASDSFFSFFHKLFQANLAKMTLGISPAALGSSYSTWLWQLAQSPE
VLWELALYPFLHANDCINNIICVERAADGKDVRFKKDSWQPMPWRLLAEGFLQVEDWWRRATNIPGLPRQVERTVSFWVR
QCLDSVSPSNFVWSNPDLFHEAIRTNGLNLLKGSQIAMEDWLEKLTGAPPTGSENFIPGKDVAVTAGRVVFQNHLIELIQ
YEAQTKTVYKEPILILPAWIMKYYILDLSPHNSLVKWLVKQGHTVFIISWRNPDKEDCDLGMDDYYRLGAMAAIDMVSTI
LPETKINLMGYCLGGTLAMITASMMGRYEDERLNCLTLLAAQGDFSEAGELMLFVNESQVDFLKSMMWEQGYLDTKQMAG
SFQMLRAYDLIWSKMVQDYMHGMRRGMIDLTAWNADATRMPYKMHSEYLEKLFLNNDFAEGRYMVEGKSVAAENIQCPIF
AVSTKKDHVAPWQSVYKIHLMTEENVTFVLTGGGHNAGIISEPGHSGHAYHVHERKKGDAYLNPTNWLEIAEKREGSWWR
EWHDWLVQQSTKKRILPPVLNTSLPSAPGTYVLQK

Sequences:

>Translated_595_residues
MNGLEKQCCPKDVILTQQEKASESLSVCCAPSILGASDSFFSFFHKLFQANLAKMTLGISPAALGSSYSTWLWQLAQSPE
VLWELALYPFLHANDCINNIICVERAADGKDVRFKKDSWQPMPWRLLAEGFLQVEDWWRRATNIPGLPRQVERTVSFWVR
QCLDSVSPSNFVWSNPDLFHEAIRTNGLNLLKGSQIAMEDWLEKLTGAPPTGSENFIPGKDVAVTAGRVVFQNHLIELIQ
YEAQTKTVYKEPILILPAWIMKYYILDLSPHNSLVKWLVKQGHTVFIISWRNPDKEDCDLGMDDYYRLGAMAAIDMVSTI
LPETKINLMGYCLGGTLAMITASMMGRYEDERLNCLTLLAAQGDFSEAGELMLFVNESQVDFLKSMMWEQGYLDTKQMAG
SFQMLRAYDLIWSKMVQDYMHGMRRGMIDLTAWNADATRMPYKMHSEYLEKLFLNNDFAEGRYMVEGKSVAAENIQCPIF
AVSTKKDHVAPWQSVYKIHLMTEENVTFVLTGGGHNAGIISEPGHSGHAYHVHERKKGDAYLNPTNWLEIAEKREGSWWR
EWHDWLVQQSTKKRILPPVLNTSLPSAPGTYVLQK
>Mature_595_residues
MNGLEKQCCPKDVILTQQEKASESLSVCCAPSILGASDSFFSFFHKLFQANLAKMTLGISPAALGSSYSTWLWQLAQSPE
VLWELALYPFLHANDCINNIICVERAADGKDVRFKKDSWQPMPWRLLAEGFLQVEDWWRRATNIPGLPRQVERTVSFWVR
QCLDSVSPSNFVWSNPDLFHEAIRTNGLNLLKGSQIAMEDWLEKLTGAPPTGSENFIPGKDVAVTAGRVVFQNHLIELIQ
YEAQTKTVYKEPILILPAWIMKYYILDLSPHNSLVKWLVKQGHTVFIISWRNPDKEDCDLGMDDYYRLGAMAAIDMVSTI
LPETKINLMGYCLGGTLAMITASMMGRYEDERLNCLTLLAAQGDFSEAGELMLFVNESQVDFLKSMMWEQGYLDTKQMAG
SFQMLRAYDLIWSKMVQDYMHGMRRGMIDLTAWNADATRMPYKMHSEYLEKLFLNNDFAEGRYMVEGKSVAAENIQCPIF
AVSTKKDHVAPWQSVYKIHLMTEENVTFVLTGGGHNAGIISEPGHSGHAYHVHERKKGDAYLNPTNWLEIAEKREGSWWR
EWHDWLVQQSTKKRILPPVLNTSLPSAPGTYVLQK

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 67742; Mature: 67742

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLEKQCCPKDVILTQQEKASESLSVCCAPSILGASDSFFSFFHKLFQANLAKMTLGIS
CCCCCCCCCCCHHEECCHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHEECCC
PAALGSSYSTWLWQLAQSPEVLWELALYPFLHANDCINNIICVERAADGKDVRFKKDSWQ
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCEEEECCCCC
PMPWRLLAEGFLQVEDWWRRATNIPGLPRQVERTVSFWVRQCLDSVSPSNFVWSNPDLFH
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHH
EAIRTNGLNLLKGSQIAMEDWLEKLTGAPPTGSENFIPGKDVAVTAGRVVFQNHLIELIQ
HHHHHCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH
YEAQTKTVYKEPILILPAWIMKYYILDLSPHNSLVKWLVKQGHTVFIISWRNPDKEDCDL
HHHHHHHHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCC
GMDDYYRLGAMAAIDMVSTILPETKINLMGYCLGGTLAMITASMMGRYEDERLNCLTLLA
CCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHHHHHHHHHHCCCCCHHHCEEEEEE
AQGDFSEAGELMLFVNESQVDFLKSMMWEQGYLDTKQMAGSFQMLRAYDLIWSKMVQDYM
CCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HGMRRGMIDLTAWNADATRMPYKMHSEYLEKLFLNNDFAEGRYMVEGKSVAAENIQCPIF
HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCEE
AVSTKKDHVAPWQSVYKIHLMTEENVTFVLTGGGHNAGIISEPGHSGHAYHVHERKKGDA
EEECCCCCCCCHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCC
YLNPTNWLEIAEKREGSWWREWHDWLVQQSTKKRILPPVLNTSLPSAPGTYVLQK
EECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECC
>Mature Secondary Structure
MNGLEKQCCPKDVILTQQEKASESLSVCCAPSILGASDSFFSFFHKLFQANLAKMTLGIS
CCCCCCCCCCCHHEECCHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHEECCC
PAALGSSYSTWLWQLAQSPEVLWELALYPFLHANDCINNIICVERAADGKDVRFKKDSWQ
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCEEEECCCCC
PMPWRLLAEGFLQVEDWWRRATNIPGLPRQVERTVSFWVRQCLDSVSPSNFVWSNPDLFH
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHH
EAIRTNGLNLLKGSQIAMEDWLEKLTGAPPTGSENFIPGKDVAVTAGRVVFQNHLIELIQ
HHHHHCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHH
YEAQTKTVYKEPILILPAWIMKYYILDLSPHNSLVKWLVKQGHTVFIISWRNPDKEDCDL
HHHHHHHHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCC
GMDDYYRLGAMAAIDMVSTILPETKINLMGYCLGGTLAMITASMMGRYEDERLNCLTLLA
CCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHHHHHHHHHHCCCCCHHHCEEEEEE
AQGDFSEAGELMLFVNESQVDFLKSMMWEQGYLDTKQMAGSFQMLRAYDLIWSKMVQDYM
CCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HGMRRGMIDLTAWNADATRMPYKMHSEYLEKLFLNNDFAEGRYMVEGKSVAAENIQCPIF
HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHCCCCCCEE
AVSTKKDHVAPWQSVYKIHLMTEENVTFVLTGGGHNAGIISEPGHSGHAYHVHERKKGDA
EEECCCCCCCCHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCC
YLNPTNWLEIAEKREGSWWREWHDWLVQQSTKKRILPPVLNTSLPSAPGTYVLQK
EECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763712 [H]