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The map label for this gene is 52841328

Identifier: 52841328

GI number: 52841328

Start: 1193984

End: 1195243

Strand: Direct

Name: 52841328

Synonym: lpg1094

Alternate gene names: NA

Gene position: 1193984-1195243 (Clockwise)

Preceding gene: 52841327

Following gene: 52841329

Centisome position: 35.14

GC content: 41.27

Gene sequence:

>1260_bases
CTGGTGAGACATTTTAGTGTTAGAAAAATTATTTGGATTGTTCTCCTGAGTTTCTGCTTTACGGAGTCATTCATTTATGC
AAAGCCTAATCCTGGTTTATCGCAGTTAATTGAGGAAGCTAAGCAAAACAATCCCCAAATTCGTGCAGCACGCGATCGTT
TACTTGCCGCAATTCATGTGATCCCACAAGCGAAAGCGTTGCCTGATCCCAAGGTGAATGCTGGCTATATCAATATGTCA
GAGAACATTCCCATGGATGTAGATCCAAGACGTGAACAAATGCTGGGTGGCCAACAAGAAATTCCCTTTCTTGGCAAGCT
TGTTGTACGAGGAAGAATAGCAACGCTTGAGGCTAAACGGGCAGAAGCGGAATATCAAGCCACGTGTTTTGCTGTCATTG
CGGAACTTAAACAGCTTTATTATGATCTTTACTTTGTCAATAAATCTCTTGAAATCGTACAAAGAAACCAAGAGCTTCTC
CATGAAATGGAAAAAAGTGCCGAAGCTAATTACAGTGTCGGAAAAACACCTCAACAAGATATTTATCGCGCTCAAACCGA
AATTTCTCGTCTTCTGATGCGCTTGGTTATCTTAAAGCAGCAACGGGAATCCTTACAGGCTGACATTAATCGTCTTTTAA
ATCGTTCCTTAGAAATCACGGTCAATACTCCAGCCATCCTTTCTCTGACACCAATGAGTCATCATTTGGATTATTTTTAT
TCACTGATTAAGCAGCGAGCACCTCAATTAATAATGCAACGGCGAAATGTTCAAAAAGGACGTCAATCCATCCGTTTAAG
TAAAATGGAGTATTTCCCCGACGTTGAAATCGAAGGTGGTCGGCTTCACGATACGGGAATGCACACCAAAGGTTATCAAG
TGTTGTTAAAAGCAACCGTTCCGCTTTATTTCATGCAAAAGCAAAATAATGCTGTGCGCGAATCAATTGCTCGTTACAGT
GCTGATATGGAGGATTTGCAGACCACTTATCGCGCGCTTTCTTTTCAAGTGAAAAATGCCTATTTATTAGCAGAGCGCTC
TGCCAAGCTTATTCATCTGATTCAACATACTATTATTCCGCAAGCCACTTTAACGTTTACTTCTTCTCAGGCTAATTACG
GGGTTGGTAAGGTGGATTTTTTAACCATGCTTAATAATTTGTTGACCCTGCAAGAAAACGAATTGGAGTGGCACGGTGAG
CTTGCTGAGCATGAGAAAGCGATTACGCAAATCGAAGCAATTACAGGGACTTATCTATGA

Upstream 100 bases:

>100_bases
GGTATTGGGCAAATCTCATTTACTCAATGTATTTCCTGGATCTTGATAGGCACGTTGCCTTTGTTAGTAATTGAAGCCCA
AAAATGGCTAAGGAAAGCAC

Downstream 100 bases:

>100_bases
ATAATAAGGTGATGATAAAGAGTATGTTTGTTTTAAGTTTACTGTCTTTGCTGCCATTAATAACCTATGCGCAAAATACA
ACCGATATGCATGGTAAGAT

Product: chemiosmotic efflux system B protein C

Products: NA

Alternate protein names: Outer Membrane Protein; Chemiosmotic Efflux System B Protein C; Cation Efflux Protein; Efflux Transporter Outer Membrane Factor Family; Outer Membrane Protein lC; Cation Efflux System Protein CusC; Outer Membrane Heavy Metal Efflux Protein; Metal Ion Efflux Outer Membrane Protein Family Protein; Metal Ion Efflux Outer Membrane Family Protein; Outer-Membrane Drug Efflux Protein; RND Family Metal Ion Efflux Pump Outer Membrane Protein

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MVRHFSVRKIIWIVLLSFCFTESFIYAKPNPGLSQLIEEAKQNNPQIRAARDRLLAAIHVIPQAKALPDPKVNAGYINMS
ENIPMDVDPRREQMLGGQQEIPFLGKLVVRGRIATLEAKRAEAEYQATCFAVIAELKQLYYDLYFVNKSLEIVQRNQELL
HEMEKSAEANYSVGKTPQQDIYRAQTEISRLLMRLVILKQQRESLQADINRLLNRSLEITVNTPAILSLTPMSHHLDYFY
SLIKQRAPQLIMQRRNVQKGRQSIRLSKMEYFPDVEIEGGRLHDTGMHTKGYQVLLKATVPLYFMQKQNNAVRESIARYS
ADMEDLQTTYRALSFQVKNAYLLAERSAKLIHLIQHTIIPQATLTFTSSQANYGVGKVDFLTMLNNLLTLQENELEWHGE
LAEHEKAITQIEAITGTYL

Sequences:

>Translated_419_residues
MVRHFSVRKIIWIVLLSFCFTESFIYAKPNPGLSQLIEEAKQNNPQIRAARDRLLAAIHVIPQAKALPDPKVNAGYINMS
ENIPMDVDPRREQMLGGQQEIPFLGKLVVRGRIATLEAKRAEAEYQATCFAVIAELKQLYYDLYFVNKSLEIVQRNQELL
HEMEKSAEANYSVGKTPQQDIYRAQTEISRLLMRLVILKQQRESLQADINRLLNRSLEITVNTPAILSLTPMSHHLDYFY
SLIKQRAPQLIMQRRNVQKGRQSIRLSKMEYFPDVEIEGGRLHDTGMHTKGYQVLLKATVPLYFMQKQNNAVRESIARYS
ADMEDLQTTYRALSFQVKNAYLLAERSAKLIHLIQHTIIPQATLTFTSSQANYGVGKVDFLTMLNNLLTLQENELEWHGE
LAEHEKAITQIEAITGTYL
>Mature_419_residues
MVRHFSVRKIIWIVLLSFCFTESFIYAKPNPGLSQLIEEAKQNNPQIRAARDRLLAAIHVIPQAKALPDPKVNAGYINMS
ENIPMDVDPRREQMLGGQQEIPFLGKLVVRGRIATLEAKRAEAEYQATCFAVIAELKQLYYDLYFVNKSLEIVQRNQELL
HEMEKSAEANYSVGKTPQQDIYRAQTEISRLLMRLVILKQQRESLQADINRLLNRSLEITVNTPAILSLTPMSHHLDYFY
SLIKQRAPQLIMQRRNVQKGRQSIRLSKMEYFPDVEIEGGRLHDTGMHTKGYQVLLKATVPLYFMQKQNNAVRESIARYS
ADMEDLQTTYRALSFQVKNAYLLAERSAKLIHLIQHTIIPQATLTFTSSQANYGVGKVDFLTMLNNLLTLQENELEWHGE
LAEHEKAITQIEAITGTYL

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48134; Mature: 48134

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRHFSVRKIIWIVLLSFCFTESFIYAKPNPGLSQLIEEAKQNNPQIRAARDRLLAAIHV
CCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IPQAKALPDPKVNAGYINMSENIPMDVDPRREQMLGGQQEIPFLGKLVVRGRIATLEAKR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCHHHHHHHHH
AEAEYQATCFAVIAELKQLYYDLYFVNKSLEIVQRNQELLHEMEKSAEANYSVGKTPQQD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
IYRAQTEISRLLMRLVILKQQRESLQADINRLLNRSLEITVNTPAILSLTPMSHHLDYFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCHHHHHHHHH
SLIKQRAPQLIMQRRNVQKGRQSIRLSKMEYFPDVEIEGGRLHDTGMHTKGYQVLLKATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCCCHHHHHHHHHC
PLYFMQKQNNAVRESIARYSADMEDLQTTYRALSFQVKNAYLLAERSAKLIHLIQHTIIP
CEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHCC
QATLTFTSSQANYGVGKVDFLTMLNNLLTLQENELEWHGELAEHEKAITQIEAITGTYL
CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVRHFSVRKIIWIVLLSFCFTESFIYAKPNPGLSQLIEEAKQNNPQIRAARDRLLAAIHV
CCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IPQAKALPDPKVNAGYINMSENIPMDVDPRREQMLGGQQEIPFLGKLVVRGRIATLEAKR
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCHHHHHHHHH
AEAEYQATCFAVIAELKQLYYDLYFVNKSLEIVQRNQELLHEMEKSAEANYSVGKTPQQD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
IYRAQTEISRLLMRLVILKQQRESLQADINRLLNRSLEITVNTPAILSLTPMSHHLDYFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCHHHHHHHHH
SLIKQRAPQLIMQRRNVQKGRQSIRLSKMEYFPDVEIEGGRLHDTGMHTKGYQVLLKATV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCCCHHHHHHHHHC
PLYFMQKQNNAVRESIARYSADMEDLQTTYRALSFQVKNAYLLAERSAKLIHLIQHTIIP
CEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHCC
QATLTFTSSQANYGVGKVDFLTMLNNLLTLQENELEWHGELAEHEKAITQIEAITGTYL
CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA