Click here to switch to the map view.

The map label for this gene is 52841324

Identifier: 52841324

GI number: 52841324

Start: 1188292

End: 1188813

Strand: Direct

Name: 52841324

Synonym: lpg1090

Alternate gene names: NA

Gene position: 1188292-1188813 (Clockwise)

Preceding gene: 52841323

Following gene: 52841325

Centisome position: 34.97

GC content: 36.02

Gene sequence:

>522_bases
TTGCCGAATGGATTGTGGAGGGTAGTTCTATCGCATCACCCCAGGTATTATCGTGAACATGAGCGTTCAGGATCAGGTCT
TGTTTTTTGCCAACTTCTAGTCAGAAGTCAAAAAGCAGGGTCTGCTCCAGATATGCTCTCAACAGTATTGACAAAAATAT
TATTAAAAAAGAGAAAGGAATATTATCAGCAATTAGGCTTAGCAAGTAAAACCTTAGACCTGACATCCTGGCTTTTATGG
TTTGCTAACATTGCTCTGGAGGATTATATGTATATTGATTTTATTATTAAAAAATCTGTCATTTTAAGGGAAGCCGAAGG
GAAAATTAATCCAAGGCAAGAAAAGGTGTTATTAAGATTATTTCATGCTGGGCCTGAGGGGGTTGTGGGTGGTTTAAGTG
CTAAAAATTATATGAGCATTACTAATGCAACGATTGCTACAACAACCAGAGATTTAAATGATTTGGTTAAAAAAATATTC
TCAAAAGAACTGGTGAGCTTAAAGCGACTCGTTATTTTTTAA

Upstream 100 bases:

>100_bases
AAGAAACCAAAGGTCATGGACGTTTACCCCATACTGCTTATGCCAATGCGAATGCGAATGAGTACAATATCCCCATAGAG
ACACTAAGCCCTGGTCAGCC

Downstream 100 bases:

>100_bases
ATCTCGATAAGTTTTAAATAGGATTTATTGAACTTGGTACGTAGTGAGTTCCAAAATGGAACTTACTAAAGCATACAATT
TGTCAGACATTATAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Fic Family Protein; Fic Protein Family; Xin-Antitoxin System Toxin Component Fic Family; Filamentation Induced By Camp Protein Fic

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPNGLWRVVLSHHPRYYREHERSGSGLVFCQLLVRSQKAGSAPDMLSTVLTKILLKKRKEYYQQLGLASKTLDLTSWLLW
FANIALEDYMYIDFIIKKSVILREAEGKINPRQEKVLLRLFHAGPEGVVGGLSAKNYMSITNATIATTTRDLNDLVKKIF
SKELVSLKRLVIF

Sequences:

>Translated_173_residues
MPNGLWRVVLSHHPRYYREHERSGSGLVFCQLLVRSQKAGSAPDMLSTVLTKILLKKRKEYYQQLGLASKTLDLTSWLLW
FANIALEDYMYIDFIIKKSVILREAEGKINPRQEKVLLRLFHAGPEGVVGGLSAKNYMSITNATIATTTRDLNDLVKKIF
SKELVSLKRLVIF
>Mature_172_residues
PNGLWRVVLSHHPRYYREHERSGSGLVFCQLLVRSQKAGSAPDMLSTVLTKILLKKRKEYYQQLGLASKTLDLTSWLLWF
ANIALEDYMYIDFIIKKSVILREAEGKINPRQEKVLLRLFHAGPEGVVGGLSAKNYMSITNATIATTTRDLNDLVKKIFS
KELVSLKRLVIF

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19783; Mature: 19651

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNGLWRVVLSHHPRYYREHERSGSGLVFCQLLVRSQKAGSAPDMLSTVLTKILLKKRKE
CCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
YYQQLGLASKTLDLTSWLLWFANIALEDYMYIDFIIKKSVILREAEGKINPRQEKVLLRL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FHAGPEGVVGGLSAKNYMSITNATIATTTRDLNDLVKKIFSKELVSLKRLVIF
HHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PNGLWRVVLSHHPRYYREHERSGSGLVFCQLLVRSQKAGSAPDMLSTVLTKILLKKRKE
CCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
YYQQLGLASKTLDLTSWLLWFANIALEDYMYIDFIIKKSVILREAEGKINPRQEKVLLRL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FHAGPEGVVGGLSAKNYMSITNATIATTTRDLNDLVKKIFSKELVSLKRLVIF
HHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA