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The map label for this gene is 52841322

Identifier: 52841322

GI number: 52841322

Start: 1185394

End: 1187199

Strand: Direct

Name: 52841322

Synonym: lpg1088

Alternate gene names: NA

Gene position: 1185394-1187199 (Clockwise)

Preceding gene: 52841321

Following gene: 52841323

Centisome position: 34.89

GC content: 36.1

Gene sequence:

>1806_bases
ATGGGCATTTTTCTAGAAACTAAAAGACTAATACTTAAAAGAGTCGAATTATCCGATCTTGATCTGTTAGTAGCATTGAG
ATCTGATTTAGAAGTAATGGAAAATACTGGTTATGGGGGTACTCAGACAATAGAAGAGGTAAGAGAGTACTTAGATTTTG
CTATTCCTTATCAAGAAAAGCATGGAATGGGATTTTGTCTGGTATTTGAAAAGGAAAGCGGAAACTTTGTTGGCGAAGCG
GGTTTATTCCATTTGTTATTTGATGATAAGCAATCCGAAATTGAACTTGGTTACCACTTGCATAAAAAGTTTTGGGGGAA
AGGCTATGGCACTGAATTAGCAAAGGCACTAATTCAGTGGGGGTTTCAGCACTTATCTGTCAACAAGCTCATTTCTACCG
CCTATCCAGATAATATCGCTTCTCAAAAAGTCTTAAACAAGGCGGGCTTTGATTGCATGAGTAAAAAACAATTGCCTGAT
GGCGAGGAATTGTTTTGGTATGAAATTTACAAGAATGATTCCGTTGAATTAGTGCCTTATGATTCTCAATGGCCAAAGAT
AGCTGAAGTGGAAATTAAAAAGCTACGAAAAATCCTGCCAACTAATCATGTTATTGATATCCAACATGTTGGTAGCACAG
CTATTCCAGGAATGCTGGCTAAGCCTATTATTGATATTCAAATTACTGTTGATTCTCTAACCGCTATAAAACAGACAGCG
ATAGCCGTATTAAAAGCCTATGACTACGTATATTGGGCCGAAGATCCTGATCCTGAAAAAATGTTTTTTGTAAAAGGGAT
GCCTCCATTTGGTGAAAAACGAACATACCATGTGCATATTATTGAGCCTAAATCAAAGCGTGGGCACGATAGAATCATTT
TTAGGGATTATTTGATTGCTCATCCTGAGGTAGCGCGTGAGTATGAACAATTAAAAATAGAATTGGCACATGAATATACT
TATGATCGGGAGCAGTATACCGATGCTAAAACACAATTCATTGCCAGTGTATTAGGCAAAGCTCTAGTAACTGATCAAAT
TCAGAACCTGACAAAATATAAAGGAATAAATGAACTACTACACCAGCTCCTCTTACAAATACAATCTATTCTAGCAAACG
AATTTGTAGGTATGTACATTGGAGGTTCTCTCGCAAGTGATTCATTCAATAGTGAAACAAGTGATATTGATTGCTACATT
ATTACAAGCAAGATGCTTTCTGAGAATATGATCGGAAAGATTGAGGAAATGCACAATCAATTTTATTCAAGTAAATTAAA
ATATGCGAAAAAAATTGAAGCTTCCTACGTTCCTCAAAAAGATCTCGTAGATTTTGATCCCCAAGGCATGCGTCCTTATT
TTAATGAAGGTCGCTATTACCTGGGGCATTATGGCAATAATTATTTAATCGAACTATTTGTACTAAGAGAAAAAGGAATT
TCAATTGCAGGGCCCGATATAAAATGTTTAATCCAAGAAATATCCAATCAAAGTTTGAAGGCTGCTATACAGAAAAATTT
GCACGAATATTGGGAGTCTAACTTAATTGATTTTTCAAAATTTAAACGCAGTGACTATCAGGTGTTTACAATTTTAACCA
TGTGCCGCACCCTTTATTCTTTAGAAACAGGCAAAATAACTTCTAAAATAGAAGCAGCACAATGGGCAATGCAGCATCTT
GATACTAAATGGGAAAAGTTGATTGAATTAGCTGCCGCTTGGGAGCCAAGCCAGGAAATAAATAGATTAGAGGAAACGCA
GAATTTTGTCAGGTATGTGCTGAATAAAAGTCGTGAGTATCAATGA

Upstream 100 bases:

>100_bases
TTCGTGCTACCCCGGCGCTACCTTTTGTAGCAACTGCTATCGTAGAAGCATCAAATAAAAAGTATAATTCCTTCCAGTTT
AAAATATAGATAGACACCCA

Downstream 100 bases:

>100_bases
GCAGATCACATTACTTTTCAGAATAAATGAAGACTGAAAATTTATTGTAGTAGTCTGATAAAATCTCACTCATCAATAAA
TCCAGCTATTGTTATTTTAG

Product: nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MGIFLETKRLILKRVELSDLDLLVALRSDLEVMENTGYGGTQTIEEVREYLDFAIPYQEKHGMGFCLVFEKESGNFVGEA
GLFHLLFDDKQSEIELGYHLHKKFWGKGYGTELAKALIQWGFQHLSVNKLISTAYPDNIASQKVLNKAGFDCMSKKQLPD
GEELFWYEIYKNDSVELVPYDSQWPKIAEVEIKKLRKILPTNHVIDIQHVGSTAIPGMLAKPIIDIQITVDSLTAIKQTA
IAVLKAYDYVYWAEDPDPEKMFFVKGMPPFGEKRTYHVHIIEPKSKRGHDRIIFRDYLIAHPEVAREYEQLKIELAHEYT
YDREQYTDAKTQFIASVLGKALVTDQIQNLTKYKGINELLHQLLLQIQSILANEFVGMYIGGSLASDSFNSETSDIDCYI
ITSKMLSENMIGKIEEMHNQFYSSKLKYAKKIEASYVPQKDLVDFDPQGMRPYFNEGRYYLGHYGNNYLIELFVLREKGI
SIAGPDIKCLIQEISNQSLKAAIQKNLHEYWESNLIDFSKFKRSDYQVFTILTMCRTLYSLETGKITSKIEAAQWAMQHL
DTKWEKLIELAAAWEPSQEINRLEETQNFVRYVLNKSREYQ

Sequences:

>Translated_601_residues
MGIFLETKRLILKRVELSDLDLLVALRSDLEVMENTGYGGTQTIEEVREYLDFAIPYQEKHGMGFCLVFEKESGNFVGEA
GLFHLLFDDKQSEIELGYHLHKKFWGKGYGTELAKALIQWGFQHLSVNKLISTAYPDNIASQKVLNKAGFDCMSKKQLPD
GEELFWYEIYKNDSVELVPYDSQWPKIAEVEIKKLRKILPTNHVIDIQHVGSTAIPGMLAKPIIDIQITVDSLTAIKQTA
IAVLKAYDYVYWAEDPDPEKMFFVKGMPPFGEKRTYHVHIIEPKSKRGHDRIIFRDYLIAHPEVAREYEQLKIELAHEYT
YDREQYTDAKTQFIASVLGKALVTDQIQNLTKYKGINELLHQLLLQIQSILANEFVGMYIGGSLASDSFNSETSDIDCYI
ITSKMLSENMIGKIEEMHNQFYSSKLKYAKKIEASYVPQKDLVDFDPQGMRPYFNEGRYYLGHYGNNYLIELFVLREKGI
SIAGPDIKCLIQEISNQSLKAAIQKNLHEYWESNLIDFSKFKRSDYQVFTILTMCRTLYSLETGKITSKIEAAQWAMQHL
DTKWEKLIELAAAWEPSQEINRLEETQNFVRYVLNKSREYQ
>Mature_600_residues
GIFLETKRLILKRVELSDLDLLVALRSDLEVMENTGYGGTQTIEEVREYLDFAIPYQEKHGMGFCLVFEKESGNFVGEAG
LFHLLFDDKQSEIELGYHLHKKFWGKGYGTELAKALIQWGFQHLSVNKLISTAYPDNIASQKVLNKAGFDCMSKKQLPDG
EELFWYEIYKNDSVELVPYDSQWPKIAEVEIKKLRKILPTNHVIDIQHVGSTAIPGMLAKPIIDIQITVDSLTAIKQTAI
AVLKAYDYVYWAEDPDPEKMFFVKGMPPFGEKRTYHVHIIEPKSKRGHDRIIFRDYLIAHPEVAREYEQLKIELAHEYTY
DREQYTDAKTQFIASVLGKALVTDQIQNLTKYKGINELLHQLLLQIQSILANEFVGMYIGGSLASDSFNSETSDIDCYII
TSKMLSENMIGKIEEMHNQFYSSKLKYAKKIEASYVPQKDLVDFDPQGMRPYFNEGRYYLGHYGNNYLIELFVLREKGIS
IAGPDIKCLIQEISNQSLKAAIQKNLHEYWESNLIDFSKFKRSDYQVFTILTMCRTLYSLETGKITSKIEAAQWAMQHLD
TKWEKLIELAAAWEPSQEINRLEETQNFVRYVLNKSREYQ

Specific function: Unknown

COG id: COG2320

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0157 (GrpB) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007344 [H]

Pfam domain/function: PF04229 UPF0157 [H]

EC number: NA

Molecular weight: Translated: 69520; Mature: 69389

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFLETKRLILKRVELSDLDLLVALRSDLEVMENTGYGGTQTIEEVREYLDFAIPYQEK
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
HGMGFCLVFEKESGNFVGEAGLFHLLFDDKQSEIELGYHLHKKFWGKGYGTELAKALIQW
CCCEEEEEEECCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GFQHLSVNKLISTAYPDNIASQKVLNKAGFDCMSKKQLPDGEELFWYEIYKNDSVELVPY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCCEEEEEC
DSQWPKIAEVEIKKLRKILPTNHVIDIQHVGSTAIPGMLAKPIIDIQITVDSLTAIKQTA
CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCEEEEEEEHHHHHHHHHHH
IAVLKAYDYVYWAEDPDPEKMFFVKGMPPFGEKRTYHVHIIEPKSKRGHDRIIFRDYLIA
HHHHHHHCEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHC
HPEVAREYEQLKIELAHEYTYDREQYTDAKTQFIASVLGKALVTDQIQNLTKYKGINELL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
HQLLLQIQSILANEFVGMYIGGSLASDSFNSETSDIDCYIITSKMLSENMIGKIEEMHNQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
FYSSKLKYAKKIEASYVPQKDLVDFDPQGMRPYFNEGRYYLGHYGNNYLIELFVLREKGI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCEEEEEEEEEECCC
SIAGPDIKCLIQEISNQSLKAAIQKNLHEYWESNLIDFSKFKRSDYQVFTILTMCRTLYS
EECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHH
LETGKITSKIEAAQWAMQHLDTKWEKLIELAAAWEPSQEINRLEETQNFVRYVLNKSREY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q
C
>Mature Secondary Structure 
GIFLETKRLILKRVELSDLDLLVALRSDLEVMENTGYGGTQTIEEVREYLDFAIPYQEK
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
HGMGFCLVFEKESGNFVGEAGLFHLLFDDKQSEIELGYHLHKKFWGKGYGTELAKALIQW
CCCEEEEEEECCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GFQHLSVNKLISTAYPDNIASQKVLNKAGFDCMSKKQLPDGEELFWYEIYKNDSVELVPY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCEEEEEEECCCCEEEEEC
DSQWPKIAEVEIKKLRKILPTNHVIDIQHVGSTAIPGMLAKPIIDIQITVDSLTAIKQTA
CCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCEEEEEEEHHHHHHHHHHH
IAVLKAYDYVYWAEDPDPEKMFFVKGMPPFGEKRTYHVHIIEPKSKRGHDRIIFRDYLIA
HHHHHHHCEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHC
HPEVAREYEQLKIELAHEYTYDREQYTDAKTQFIASVLGKALVTDQIQNLTKYKGINELL
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
HQLLLQIQSILANEFVGMYIGGSLASDSFNSETSDIDCYIITSKMLSENMIGKIEEMHNQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
FYSSKLKYAKKIEASYVPQKDLVDFDPQGMRPYFNEGRYYLGHYGNNYLIELFVLREKGI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCEEEEEEEEEECCC
SIAGPDIKCLIQEISNQSLKAAIQKNLHEYWESNLIDFSKFKRSDYQVFTILTMCRTLYS
EECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHH
LETGKITSKIEAAQWAMQHLDTKWEKLIELAAAWEPSQEINRLEETQNFVRYVLNKSREY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]