Click here to switch to the map view.

The map label for this gene is korA [H]

Identifier: 52841182

GI number: 52841182

Start: 1027860

End: 1029677

Strand: Direct

Name: korA [H]

Synonym: lpg0947

Alternate gene names: 52841182

Gene position: 1027860-1029677 (Clockwise)

Preceding gene: 52841181

Following gene: 52841183

Centisome position: 30.25

GC content: 42.96

Gene sequence:

>1818_bases
ATGTCAACGACTGATGTCATTGTTGTACGTATCACTGGCGATTCTGGTGACGGAGTACAATTGGTAGGTGAACAATTAAC
CATTAGCGCGGCATTGACAGGACGTGATGTGCGTACTATGCCTGATTTCCCGGCAGAAATCCGGGCTCCTGCTGGAACAG
TTGCGGGTGTCTCAGGATTTCAGTTGGCAATGGCGGAAAGGGCTATTTTTACTGCCGGAGAGTCATTGGATGTTTTAGTG
GCTTTAAATCCAGCTGCATTAAAAAACTCACTTCAACATTTGAATCAAGGTGGTTTATTGATCATTAATGAAGACAGTTT
TCAAGAAAGAGATTGGCAAAAAGCAGGTATCGATAAGAGTTTCCTGGATAATTGTCGAGAACATTATCACATTGTTGCTT
TCCCATTAATTACACAAACTATTCAGGCAGTTGAATCCATTAACCTTACAAAACCACAGGCTGTCAAAACCAAGAATTTT
TATATTTTGGGATTGGTTTTGTGGTTGTTTGATTTGCCTACAGAAACTTGCCAGGCTTTTATCGCTAAAAAGTTTAAAAC
AAATCAGGCCATAGCAAAAGCCAATGAATTGGCTTTGTTGGCAGGATATAATTATGCTATGACTCTGGAGCTTTCCCGTC
GGGATTACATGCTGGGGGAAGTCAACAGGCATTCAGGTGAGTACAGGCAAATCACTGGAGTTGAGGCAGTAGGGTTAGCT
CTGGCTACATTAGCTACTCAGACACAAGTTCCACTGCTGGTGTCAGGTTACCCAATTACACCGGCTTCTGCTATTTTGCA
TGAATGTGCTCGCTTATCTGATTACGGCGTACAGTTAATACAAGCCGAGGATGAAATTGCCGCTATTTGTTCTTGTATAG
GGGCTGCTTATGGTGGTCGTTTAGCTCTGACCTGTACTTCAGGGCCTGGACTTGATTTAAAATGTGAAAGCCTGGGCTTG
GCTGTTGTGACGGAGCTGCCCTTGGTGCTAGTTGATGTGCAAAGAGCGGGGGCTTCAACAGGTTTGCCCACAAAAACCAG
CCAGAGTGATTTAAAGCAAGCTTTGTATGGTCGCCATGGCGAGGCACCTTTACCTGTGATTGCAGCTCAATCCCCTGCTG
ATTGTTTTAATACAATTATTGAAGCCTTCAGGATAGCCATCAAGTACATGACTCCAGTTATTGTATTACTCGATGCTTAT
TTGGCGAACGCGGCAGAGCCCTGGGAAATTCCTGCTTTGGATTCTCTCAATATACCAAAACCGGAGTTTAATCGTTTTAC
CAAACCCTATCATCGAGATGAATTTTTAAGTAGAAGCTGGAATGTTCCTGGAACTTCCGGGTTTATTCATCAAATTGGAG
GCTTGGAAAAGCAAGGCGATGAAGGACGAGTTAGTTACGATGCTGAGAATCATCAAAAAATGGTGATTACACGCGCCGAG
AAAATAAAGGGTATTGCAAGAGATTATCCTGCTTTGGTTCTTGAGGGTGATATGACGGCTCCCACGCTTGTTATAGGTTG
GGGTAGTACTTTTGGTAGTTTAAAGTCTGCTGTACAACAATGTCTTGAACAGGGATTACCGGTTGCCTATCTGCATCTGC
GCCATCTTAACCCATTACCTGATGATTTGGGCTCTTTGTTGAAAAAATATGACAAGGTATTGGTTGCTGAATTAAATTCT
GGCCAATTATGTCAACTCATCAGAGCAGTTTATCTGGTGGATGCGCAATCGATTAGCCAATGCAATGGTCAACCTTTCAG
TGTTAATCCTTTGGTAAGTGCCATTAAAGCGGAAGCTAACTATGAACAGCAATTATAA

Upstream 100 bases:

>100_bases
GAACTTAACATAGGACATGCCATTATTGCCAGAGCATTATTCTGTGGATTAAAAGAGGCAGTAAGACACATGCGCCAATT
AATGCAGGAAGCGAGACTTT

Downstream 100 bases:

>100_bases
GCGTGAAGATTTTGTGAATGAAACAGAAGTTCGCTGGTGTCCTGGATGTGGTGATTATGCCATTTTGGCTGCTTTGCAAA
GAGTACTTCCTGAGTTAGGT

Product: 2-oxoglutarate ferredoxin oxidoreductase alpha subunit

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MSTTDVIVVRITGDSGDGVQLVGEQLTISAALTGRDVRTMPDFPAEIRAPAGTVAGVSGFQLAMAERAIFTAGESLDVLV
ALNPAALKNSLQHLNQGGLLIINEDSFQERDWQKAGIDKSFLDNCREHYHIVAFPLITQTIQAVESINLTKPQAVKTKNF
YILGLVLWLFDLPTETCQAFIAKKFKTNQAIAKANELALLAGYNYAMTLELSRRDYMLGEVNRHSGEYRQITGVEAVGLA
LATLATQTQVPLLVSGYPITPASAILHECARLSDYGVQLIQAEDEIAAICSCIGAAYGGRLALTCTSGPGLDLKCESLGL
AVVTELPLVLVDVQRAGASTGLPTKTSQSDLKQALYGRHGEAPLPVIAAQSPADCFNTIIEAFRIAIKYMTPVIVLLDAY
LANAAEPWEIPALDSLNIPKPEFNRFTKPYHRDEFLSRSWNVPGTSGFIHQIGGLEKQGDEGRVSYDAENHQKMVITRAE
KIKGIARDYPALVLEGDMTAPTLVIGWGSTFGSLKSAVQQCLEQGLPVAYLHLRHLNPLPDDLGSLLKKYDKVLVAELNS
GQLCQLIRAVYLVDAQSISQCNGQPFSVNPLVSAIKAEANYEQQL

Sequences:

>Translated_605_residues
MSTTDVIVVRITGDSGDGVQLVGEQLTISAALTGRDVRTMPDFPAEIRAPAGTVAGVSGFQLAMAERAIFTAGESLDVLV
ALNPAALKNSLQHLNQGGLLIINEDSFQERDWQKAGIDKSFLDNCREHYHIVAFPLITQTIQAVESINLTKPQAVKTKNF
YILGLVLWLFDLPTETCQAFIAKKFKTNQAIAKANELALLAGYNYAMTLELSRRDYMLGEVNRHSGEYRQITGVEAVGLA
LATLATQTQVPLLVSGYPITPASAILHECARLSDYGVQLIQAEDEIAAICSCIGAAYGGRLALTCTSGPGLDLKCESLGL
AVVTELPLVLVDVQRAGASTGLPTKTSQSDLKQALYGRHGEAPLPVIAAQSPADCFNTIIEAFRIAIKYMTPVIVLLDAY
LANAAEPWEIPALDSLNIPKPEFNRFTKPYHRDEFLSRSWNVPGTSGFIHQIGGLEKQGDEGRVSYDAENHQKMVITRAE
KIKGIARDYPALVLEGDMTAPTLVIGWGSTFGSLKSAVQQCLEQGLPVAYLHLRHLNPLPDDLGSLLKKYDKVLVAELNS
GQLCQLIRAVYLVDAQSISQCNGQPFSVNPLVSAIKAEANYEQQL
>Mature_604_residues
STTDVIVVRITGDSGDGVQLVGEQLTISAALTGRDVRTMPDFPAEIRAPAGTVAGVSGFQLAMAERAIFTAGESLDVLVA
LNPAALKNSLQHLNQGGLLIINEDSFQERDWQKAGIDKSFLDNCREHYHIVAFPLITQTIQAVESINLTKPQAVKTKNFY
ILGLVLWLFDLPTETCQAFIAKKFKTNQAIAKANELALLAGYNYAMTLELSRRDYMLGEVNRHSGEYRQITGVEAVGLAL
ATLATQTQVPLLVSGYPITPASAILHECARLSDYGVQLIQAEDEIAAICSCIGAAYGGRLALTCTSGPGLDLKCESLGLA
VVTELPLVLVDVQRAGASTGLPTKTSQSDLKQALYGRHGEAPLPVIAAQSPADCFNTIIEAFRIAIKYMTPVIVLLDAYL
ANAAEPWEIPALDSLNIPKPEFNRFTKPYHRDEFLSRSWNVPGTSGFIHQIGGLEKQGDEGRVSYDAENHQKMVITRAEK
IKGIARDYPALVLEGDMTAPTLVIGWGSTFGSLKSAVQQCLEQGLPVAYLHLRHLNPLPDDLGSLLKKYDKVLVAELNSG
QLCQLIRAVYLVDAQSISQCNGQPFSVNPLVSAIKAEANYEQQL

Specific function: Unknown

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941
- InterPro:   IPR005476 [H]

Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 65549; Mature: 65418

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTDVIVVRITGDSGDGVQLVGEQLTISAALTGRDVRTMPDFPAEIRAPAGTVAGVSGF
CCCCCEEEEEEECCCCCCCEEECCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCH
QLAMAERAIFTAGESLDVLVALNPAALKNSLQHLNQGGLLIINEDSFQERDWQKAGIDKS
HHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCHH
FLDNCREHYHIVAFPLITQTIQAVESINLTKPQAVKTKNFYILGLVLWLFDLPTETCQAF
HHHHHHHCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
IAKKFKTNQAIAKANELALLAGYNYAMTLELSRRDYMLGEVNRHSGEYRQITGVEAVGLA
HHHHHHCHHHHHHHCCEEEEECCCEEEEEEECCCCCEECCCCCCCCCCEEECCHHHHHHH
LATLATQTQVPLLVSGYPITPASAILHECARLSDYGVQLIQAEDEIAAICSCIGAAYGGR
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCE
LALTCTSGPGLDLKCESLGLAVVTELPLVLVDVQRAGASTGLPTKTSQSDLKQALYGRHG
EEEEECCCCCCCEEECCCCCHHHHHCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHCCCC
EAPLPVIAAQSPADCFNTIIEAFRIAIKYMTPVIVLLDAYLANAAEPWEIPALDSLNIPK
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PEFNRFTKPYHRDEFLSRSWNVPGTSGFIHQIGGLEKQGDEGRVSYDAENHQKMVITRAE
CHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCEEEEEHHH
KIKGIARDYPALVLEGDMTAPTLVIGWGSTFGSLKSAVQQCLEQGLPVAYLHLRHLNPLP
HHHHHHCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
DDLGSLLKKYDKVLVAELNSGQLCQLIRAVYLVDAQSISQCNGQPFSVNPLVSAIKAEAN
HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHCC
YEQQL
HHCCC
>Mature Secondary Structure 
STTDVIVVRITGDSGDGVQLVGEQLTISAALTGRDVRTMPDFPAEIRAPAGTVAGVSGF
CCCCEEEEEEECCCCCCCEEECCEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCH
QLAMAERAIFTAGESLDVLVALNPAALKNSLQHLNQGGLLIINEDSFQERDWQKAGIDKS
HHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCHH
FLDNCREHYHIVAFPLITQTIQAVESINLTKPQAVKTKNFYILGLVLWLFDLPTETCQAF
HHHHHHHCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
IAKKFKTNQAIAKANELALLAGYNYAMTLELSRRDYMLGEVNRHSGEYRQITGVEAVGLA
HHHHHHCHHHHHHHCCEEEEECCCEEEEEEECCCCCEECCCCCCCCCCEEECCHHHHHHH
LATLATQTQVPLLVSGYPITPASAILHECARLSDYGVQLIQAEDEIAAICSCIGAAYGGR
HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCE
LALTCTSGPGLDLKCESLGLAVVTELPLVLVDVQRAGASTGLPTKTSQSDLKQALYGRHG
EEEEECCCCCCCEEECCCCCHHHHHCCEEEEEEHHCCCCCCCCCCCCHHHHHHHHHCCCC
EAPLPVIAAQSPADCFNTIIEAFRIAIKYMTPVIVLLDAYLANAAEPWEIPALDSLNIPK
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PEFNRFTKPYHRDEFLSRSWNVPGTSGFIHQIGGLEKQGDEGRVSYDAENHQKMVITRAE
CHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCEEEEEHHH
KIKGIARDYPALVLEGDMTAPTLVIGWGSTFGSLKSAVQQCLEQGLPVAYLHLRHLNPLP
HHHHHHCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
DDLGSLLKKYDKVLVAELNSGQLCQLIRAVYLVDAQSISQCNGQPFSVNPLVSAIKAEAN
HHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHCC
YEQQL
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]