Click here to switch to the map view.

The map label for this gene is 52841133

Identifier: 52841133

GI number: 52841133

Start: 972975

End: 973706

Strand: Reverse

Name: 52841133

Synonym: lpg0898

Alternate gene names: NA

Gene position: 973706-972975 (Counterclockwise)

Preceding gene: 52841134

Following gene: 52841132

Centisome position: 28.66

GC content: 39.34

Gene sequence:

>732_bases
TTGCACTTAACAAGAGAGGTAAACATTATGTCAATATTATCTGCTGTTTCGCGTGTCATAAATAATTTTTCAACTGAAAT
TAAAAATAGAGTTGTTGAAGTCGGGAGTAATTTAAAGAAGTCAACAGAAGAGTTTATTGGCGAAGTAGTCATAAAAGCGG
CTGTGAATCGTTTGAAACAAGGAATGTTGAATGCTTTGTCTTCTTCGAATGACACCACCAAAGATAATGGTAATGATTTA
TCCACAAACAGCCCTGACATTGAAGATGTATCTGCCCCCACGCTAAGCTCAAAGAAAAAAACAGAGGCAAATACCACTCT
GGTTGGCAGTACCGGTATAATGCAGAAATTGTTGGGCAATATTGGCGTAAATTCTGAACAAAGTATAGAAGTGTTGTCCA
AGCATTTTAATGGTGCTGTTGAGCGTTTTACCCAAGATGTTTCAAAGGCTGCAAATGAGGCTGTGTGTGAAAAGATCAAA
AGTATACAGCCGGAAGATGTGGTAAAGGGTATTAACAGTCTAATCGGCAATACTCTCAAAGTAGACTCAGAGTCTGGCGA
CACTACCCTATCATTCAAGCTTGAGAGTGCCGTACAAATCCTGGGCGTCATTCTTGCAGCCATGGGTATGCTGATGTTTG
CTTCTCAAACTAAATCAACCGAGCAGAAAACTCTAGAGATAGAACATCTGCCAACTGAAGAAATTCAACCACCTTCATTG
GCTATTCATTAA

Upstream 100 bases:

>100_bases
ATAATGAACAATTACTTTTAATTTACATTTTTTTGTAAAGAAATATTTCAATCTTAACAATTCCTTAATGTTCACTTAAT
GTTCTCTTCTTATTATTTAT

Downstream 100 bases:

>100_bases
GAAATACTCACGGCTTGTTCTTCCAGGCTACGTACCGCAAATCATTCTTGGTATGTAGCTTGAAGAATTGGCAACACATT
CATAAACTCCTTAATTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MHLTREVNIMSILSAVSRVINNFSTEIKNRVVEVGSNLKKSTEEFIGEVVIKAAVNRLKQGMLNALSSSNDTTKDNGNDL
STNSPDIEDVSAPTLSSKKKTEANTTLVGSTGIMQKLLGNIGVNSEQSIEVLSKHFNGAVERFTQDVSKAANEAVCEKIK
SIQPEDVVKGINSLIGNTLKVDSESGDTTLSFKLESAVQILGVILAAMGMLMFASQTKSTEQKTLEIEHLPTEEIQPPSL
AIH

Sequences:

>Translated_243_residues
MHLTREVNIMSILSAVSRVINNFSTEIKNRVVEVGSNLKKSTEEFIGEVVIKAAVNRLKQGMLNALSSSNDTTKDNGNDL
STNSPDIEDVSAPTLSSKKKTEANTTLVGSTGIMQKLLGNIGVNSEQSIEVLSKHFNGAVERFTQDVSKAANEAVCEKIK
SIQPEDVVKGINSLIGNTLKVDSESGDTTLSFKLESAVQILGVILAAMGMLMFASQTKSTEQKTLEIEHLPTEEIQPPSL
AIH
>Mature_243_residues
MHLTREVNIMSILSAVSRVINNFSTEIKNRVVEVGSNLKKSTEEFIGEVVIKAAVNRLKQGMLNALSSSNDTTKDNGNDL
STNSPDIEDVSAPTLSSKKKTEANTTLVGSTGIMQKLLGNIGVNSEQSIEVLSKHFNGAVERFTQDVSKAANEAVCEKIK
SIQPEDVVKGINSLIGNTLKVDSESGDTTLSFKLESAVQILGVILAAMGMLMFASQTKSTEQKTLEIEHLPTEEIQPPSL
AIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26170; Mature: 26170

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLTREVNIMSILSAVSRVINNFSTEIKNRVVEVGSNLKKSTEEFIGEVVIKAAVNRLKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMLNALSSSNDTTKDNGNDLSTNSPDIEDVSAPTLSSKKKTEANTTLVGSTGIMQKLLGN
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEECCHHHHHHHHHH
IGVNSEQSIEVLSKHFNGAVERFTQDVSKAANEAVCEKIKSIQPEDVVKGINSLIGNTLK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
VDSESGDTTLSFKLESAVQILGVILAAMGMLMFASQTKSTEQKTLEIEHLPTEEIQPPSL
ECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCC
AIH
CCC
>Mature Secondary Structure
MHLTREVNIMSILSAVSRVINNFSTEIKNRVVEVGSNLKKSTEEFIGEVVIKAAVNRLKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMLNALSSSNDTTKDNGNDLSTNSPDIEDVSAPTLSSKKKTEANTTLVGSTGIMQKLLGN
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEECCHHHHHHHHHH
IGVNSEQSIEVLSKHFNGAVERFTQDVSKAANEAVCEKIKSIQPEDVVKGINSLIGNTLK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
VDSESGDTTLSFKLESAVQILGVILAAMGMLMFASQTKSTEQKTLEIEHLPTEEIQPPSL
ECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCC
AIH
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA