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The map label for this gene is ccmC

Identifier: 52841094

GI number: 52841094

Start: 933968

End: 934759

Strand: Direct

Name: ccmC

Synonym: lpg0858

Alternate gene names: 52841094

Gene position: 933968-934759 (Clockwise)

Preceding gene: 52841093

Following gene: 52841095

Centisome position: 27.49

GC content: 39.65

Gene sequence:

>792_bases
GTGGTAGAATCCTTCTTTTTGATTTTATTGTTTCCTATGTGGAAGATATTGTATCAGTTGGCATCGCCAAAAAATTTTTA
TAACTACGCGGGACGTCTCATTCCCTGGTTGGCAGTCAGTGCTTTGACTACCATGGCCATTGGTATGGTTTGGGGATTGG
TATTTGCTCCACCAGATTATCAGCAAGGGGATGCATACCGAATTATTTTTGTTCATGTACCCAGCGCTTTTTTATCAATG
GCATTGTATGCCTGGATGGGGTTTCTGGCCATTTTATTGTTGGTGTGGCGTATCAAAATGGCAGGGCTTTTGATTCATAA
GGTCGCGCAATTAGGTGCCTGCATGGCATTTCTTGCTTTAATTACAGGGAGCATTTGGGGTAAACCCATGTGGGGTGCCT
GGTGGGTATGGGATGCCCGCCTGACCTCAGAATTAATACTTTTGTTGCTCTATCTGGCAATTCTGGCTACCTATCAAGCG
GTAAAAAATAAAGAAGATGGAGATAAAATAATAGCAATTTTAGCTTTGGTGGGTTTAATTGATTTACCAATAATTCATTA
TTCAGTTTATTGGTGGAATACTTTACACCAAGGTGCAACTTTATCTGTGTTTGCCAAACCCAAAATTGCTCTCAGTATGT
TGTATCCATTGTTAATCACTTTGCTGGGTTTTTTCTTGTATTCCTTATGGATCATTTTGGAAAAAGCACGTAATGAAGTC
TTATTCAGGGAGAGAAAGCAATCATGGGTTAAGATTCAATTTGAGGAAGAGTCTGATGAATCAGTTTTTTGA

Upstream 100 bases:

>100_bases
GCTCCGCTACGGTGCTCGAAAATCAAGGCTTTTCGACTCAAGCGAGCGAAATGTCAACAGACCCTAAGTTTGGAACTAAA
TTTTGTGATTGTTTTGATGC

Downstream 100 bases:

>100_bases
ATGGTTGGCAATGGGCGGTTATTCTCTCTATGTTTGGCCTGCTTATGGTTTGGTTTGCGTGGTTTTGGGCATGAATATTT
TAGGAATAAAGTGGCAAAGA

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MVESFFLILLFPMWKILYQLASPKNFYNYAGRLIPWLAVSALTTMAIGMVWGLVFAPPDYQQGDAYRIIFVHVPSAFLSM
ALYAWMGFLAILLLVWRIKMAGLLIHKVAQLGACMAFLALITGSIWGKPMWGAWWVWDARLTSELILLLLYLAILATYQA
VKNKEDGDKIIAILALVGLIDLPIIHYSVYWWNTLHQGATLSVFAKPKIALSMLYPLLITLLGFFLYSLWIILEKARNEV
LFRERKQSWVKIQFEEESDESVF

Sequences:

>Translated_263_residues
MVESFFLILLFPMWKILYQLASPKNFYNYAGRLIPWLAVSALTTMAIGMVWGLVFAPPDYQQGDAYRIIFVHVPSAFLSM
ALYAWMGFLAILLLVWRIKMAGLLIHKVAQLGACMAFLALITGSIWGKPMWGAWWVWDARLTSELILLLLYLAILATYQA
VKNKEDGDKIIAILALVGLIDLPIIHYSVYWWNTLHQGATLSVFAKPKIALSMLYPLLITLLGFFLYSLWIILEKARNEV
LFRERKQSWVKIQFEEESDESVF
>Mature_263_residues
MVESFFLILLFPMWKILYQLASPKNFYNYAGRLIPWLAVSALTTMAIGMVWGLVFAPPDYQQGDAYRIIFVHVPSAFLSM
ALYAWMGFLAILLLVWRIKMAGLLIHKVAQLGACMAFLALITGSIWGKPMWGAWWVWDARLTSELILLLLYLAILATYQA
VKNKEDGDKIIAILALVGLIDLPIIHYSVYWWNTLHQGATLSVFAKPKIALSMLYPLLITLLGFFLYSLWIILEKARNEV
LFRERKQSWVKIQFEEESDESVF

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=239, Percent_Identity=48.9539748953975, Blast_Score=242, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 30205; Mature: 30205

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVESFFLILLFPMWKILYQLASPKNFYNYAGRLIPWLAVSALTTMAIGMVWGLVFAPPDY
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QQGDAYRIIFVHVPSAFLSMALYAWMGFLAILLLVWRIKMAGLLIHKVAQLGACMAFLAL
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITGSIWGKPMWGAWWVWDARLTSELILLLLYLAILATYQAVKNKEDGDKIIAILALVGLI
HHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DLPIIHYSVYWWNTLHQGATLSVFAKPKIALSMLYPLLITLLGFFLYSLWIILEKARNEV
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFRERKQSWVKIQFEEESDESVF
HHHHHCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MVESFFLILLFPMWKILYQLASPKNFYNYAGRLIPWLAVSALTTMAIGMVWGLVFAPPDY
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QQGDAYRIIFVHVPSAFLSMALYAWMGFLAILLLVWRIKMAGLLIHKVAQLGACMAFLAL
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITGSIWGKPMWGAWWVWDARLTSELILLLLYLAILATYQAVKNKEDGDKIIAILALVGLI
HHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DLPIIHYSVYWWNTLHQGATLSVFAKPKIALSMLYPLLITLLGFFLYSLWIILEKARNEV
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFRERKQSWVKIQFEEESDESVF
HHHHHCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]