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The map label for this gene is ybgI [C]

Identifier: 52841084

GI number: 52841084

Start: 924399

End: 925157

Strand: Direct

Name: ybgI [C]

Synonym: lpg0848

Alternate gene names: 52841084

Gene position: 924399-925157 (Clockwise)

Preceding gene: 52841083

Following gene: 52841088

Centisome position: 27.21

GC content: 39.92

Gene sequence:

>759_bases
GTGATTACAAGAGATGAATTAAGCCTTTTTTTACTGGATTTCTTGAATTGTTCTCAATACCAGGATTATGCACCTAATGG
AATTCAAGTTGAAGGCAAAGACAAGATTAAGCGTATATGTACGGCAGTCAGTGCATCAGAGGACGTGATTTCCCAAGCTA
TTGAACAGCAAGCTGATGCACTGTTAGTTCACCATGGTTATTTCTGGAAAGGTGAAAATCCTGTTATTTCCGGAATGAAA
AGGCGAAGGATTGCTAAGCTACTTGGCCATAACATGAATTTATTTGCCTATCATTTGCCTTTGGATTGTCATCCCGAGCT
AGGGAATAATGCCAGCCTGGCGAATTTGTTGTTAATAGGGTCCCATGAGATGCATAAGGTCAACAATACTGCCAATCTCC
TTTGGTCTGGAAAATTATCAAAGGCAATGAACAGCGAACAGTTTTCCAGTTTTTTAGAGCACAAACTTGGCCGTTATCCT
GTGCATATTGCGGGAAATGAAAAAATGATTCACTCCATAGCATGGTGCACTGGAGCAGCACAAGACTTTATAGAAGAAGC
TTACCAACTTGGCGTTGATGCTTATTTAAGTGGTGAAGTTTCTGAACGAACGTTCTATCAGGCTATGGAATTGGGTATAC
AATATTTTTCTTGTGGTCATCATGCGACGGAACGTTTCGGCATTCAATCCCTCGGTGTTTATCTTGCAAACTATTTTGAC
TTGGAACATTGGTTTATAGATAGTCCTAATCCGATTTAA

Upstream 100 bases:

>100_bases
AAACAGTAGTTGAGCGGATTTATCATGTTGATAGAGGCTATGAGCGAATAGAAGAAAAGTTATCTCTATTGGGAGCGGAC
ATTAAGAGAGTTTCTGACAG

Downstream 100 bases:

>100_bases
AAAGAACAGGACCTACGCAAAATCCCAATCTCTTTGTTAAAAAATGTTTTTAATTCGTTCATTTAGTTTATTATTTAAAC
TCACTCATTACAAACATTTT

Product: putative hydrolase-oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MITRDELSLFLLDFLNCSQYQDYAPNGIQVEGKDKIKRICTAVSASEDVISQAIEQQADALLVHHGYFWKGENPVISGMK
RRRIAKLLGHNMNLFAYHLPLDCHPELGNNASLANLLLIGSHEMHKVNNTANLLWSGKLSKAMNSEQFSSFLEHKLGRYP
VHIAGNEKMIHSIAWCTGAAQDFIEEAYQLGVDAYLSGEVSERTFYQAMELGIQYFSCGHHATERFGIQSLGVYLANYFD
LEHWFIDSPNPI

Sequences:

>Translated_252_residues
MITRDELSLFLLDFLNCSQYQDYAPNGIQVEGKDKIKRICTAVSASEDVISQAIEQQADALLVHHGYFWKGENPVISGMK
RRRIAKLLGHNMNLFAYHLPLDCHPELGNNASLANLLLIGSHEMHKVNNTANLLWSGKLSKAMNSEQFSSFLEHKLGRYP
VHIAGNEKMIHSIAWCTGAAQDFIEEAYQLGVDAYLSGEVSERTFYQAMELGIQYFSCGHHATERFGIQSLGVYLANYFD
LEHWFIDSPNPI
>Mature_252_residues
MITRDELSLFLLDFLNCSQYQDYAPNGIQVEGKDKIKRICTAVSASEDVISQAIEQQADALLVHHGYFWKGENPVISGMK
RRRIAKLLGHNMNLFAYHLPLDCHPELGNNASLANLLLIGSHEMHKVNNTANLLWSGKLSKAMNSEQFSSFLEHKLGRYP
VHIAGNEKMIHSIAWCTGAAQDFIEEAYQLGVDAYLSGEVSERTFYQAMELGIQYFSCGHHATERFGIQSLGVYLANYFD
LEHWFIDSPNPI

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=247, Percent_Identity=46.5587044534413, Blast_Score=239, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 28455; Mature: 28455

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITRDELSLFLLDFLNCSQYQDYAPNGIQVEGKDKIKRICTAVSASEDVISQAIEQQADA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHE
LLVHHGYFWKGENPVISGMKRRRIAKLLGHNMNLFAYHLPLDCHPELGNNASLANLLLIG
EEEECCEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC
SHEMHKVNNTANLLWSGKLSKAMNSEQFSSFLEHKLGRYPVHIAGNEKMIHSIAWCTGAA
CCHHHHCCCCHHEEECCHHHHHCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH
QDFIEEAYQLGVDAYLSGEVSERTFYQAMELGIQYFSCGHHATERFGIQSLGVYLANYFD
HHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LEHWFIDSPNPI
HHHEECCCCCCC
>Mature Secondary Structure
MITRDELSLFLLDFLNCSQYQDYAPNGIQVEGKDKIKRICTAVSASEDVISQAIEQQADA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHE
LLVHHGYFWKGENPVISGMKRRRIAKLLGHNMNLFAYHLPLDCHPELGNNASLANLLLIG
EEEECCEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEC
SHEMHKVNNTANLLWSGKLSKAMNSEQFSSFLEHKLGRYPVHIAGNEKMIHSIAWCTGAA
CCHHHHCCCCHHEEECCHHHHHCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH
QDFIEEAYQLGVDAYLSGEVSERTFYQAMELGIQYFSCGHHATERFGIQSLGVYLANYFD
HHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LEHWFIDSPNPI
HHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]