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The map label for this gene is 52840902

Identifier: 52840902

GI number: 52840902

Start: 716146

End: 716610

Strand: Reverse

Name: 52840902

Synonym: lpg0665

Alternate gene names: NA

Gene position: 716610-716146 (Counterclockwise)

Preceding gene: 52840903

Following gene: 52840901

Centisome position: 21.09

GC content: 37.2

Gene sequence:

>465_bases
ATGAAAGCACTTATAGCAAAAACCTATCTGCTGGCTGATAAAATTTTTGATTTCCTTGCCCCAATTTTTATCCTTTTAAC
CCGCCTTTATCTGGCCCAGGTTTTTTTTCTATCTGGCTTAACCAAAATCAGTAATTGGCAGGCTACTCTTTCTTTATTCC
AAAACGAATACATGGTTCCCGTTATGTCGCCTACTTTTGCCGCGTATCTGGGAACAGCTTGTGAACTGGGCTTTCCTATA
TTGATTACATTAGGACTTGGATCCAGGCTCGTTTTATTTGGACTTTTTCTATTTAACTTATTTGCTGTTTTCTCTTATAA
ATTTCTGTGGACACCAGACGGTGCCGTTGGCCTTACCGATCATATGCAATGGGGAATCATGATTTTAATGCTCTTATGTA
CCGGGCCAGGGAAATTATCAATTGATTATTTAATCAGACGATTTTATTTGAAATTAGATAATTAA

Upstream 100 bases:

>100_bases
TAACAGAATTAAGTAAATGGATTAGCGAAGAAAAAATTGGCGACACTCTAACCAAGGCGCTTCGTTATCAATGGATTAAT
CATTTTTCACTGGAGGCTAT

Downstream 100 bases:

>100_bases
TTGAATCTTTAAACTCCATAGCACGAAACATCAAGCATTCTATACCATCCTCTCTCTAACGAATCAGAGAGGATGGAATT
TTGTTATCTTGATTTGCTCC

Product: putative transmembrane protein

Products: NA

Alternate protein names: Transmembrane Protein; DoxD Family Protein; NADH Dehydrogenase

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKALIAKTYLLADKIFDFLAPIFILLTRLYLAQVFFLSGLTKISNWQATLSLFQNEYMVPVMSPTFAAYLGTACELGFPI
LITLGLGSRLVLFGLFLFNLFAVFSYKFLWTPDGAVGLTDHMQWGIMILMLLCTGPGKLSIDYLIRRFYLKLDN

Sequences:

>Translated_154_residues
MKALIAKTYLLADKIFDFLAPIFILLTRLYLAQVFFLSGLTKISNWQATLSLFQNEYMVPVMSPTFAAYLGTACELGFPI
LITLGLGSRLVLFGLFLFNLFAVFSYKFLWTPDGAVGLTDHMQWGIMILMLLCTGPGKLSIDYLIRRFYLKLDN
>Mature_154_residues
MKALIAKTYLLADKIFDFLAPIFILLTRLYLAQVFFLSGLTKISNWQATLSLFQNEYMVPVMSPTFAAYLGTACELGFPI
LITLGLGSRLVLFGLFLFNLFAVFSYKFLWTPDGAVGLTDHMQWGIMILMLLCTGPGKLSIDYLIRRFYLKLDN

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17457; Mature: 17457

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALIAKTYLLADKIFDFLAPIFILLTRLYLAQVFFLSGLTKISNWQATLSLFQNEYMVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VMSPTFAAYLGTACELGFPILITLGLGSRLVLFGLFLFNLFAVFSYKFLWTPDGAVGLTD
ECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHH
HMQWGIMILMLLCTGPGKLSIDYLIRRFYLKLDN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKALIAKTYLLADKIFDFLAPIFILLTRLYLAQVFFLSGLTKISNWQATLSLFQNEYMVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VMSPTFAAYLGTACELGFPILITLGLGSRLVLFGLFLFNLFAVFSYKFLWTPDGAVGLTD
ECCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHH
HMQWGIMILMLLCTGPGKLSIDYLIRRFYLKLDN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA