Click here to switch to the map view.

The map label for this gene is 52840859

Identifier: 52840859

GI number: 52840859

Start: 655706

End: 657649

Strand: Reverse

Name: 52840859

Synonym: lpg0622

Alternate gene names: NA

Gene position: 657649-655706 (Counterclockwise)

Preceding gene: 52840860

Following gene: 52840858

Centisome position: 19.36

GC content: 35.75

Gene sequence:

>1944_bases
ATGCCTACAAAAAAAATGACTAGAGCCCAAACCTGCCCTCATCAAACGACCGTTATTTCAAATCTTAAAATAATTCCACT
CACTTTGGGGTGGTTATTAAAATCTGCTTTGCTCATTATTATAATCGCCGTTTTTATTCCACTATCCCCCAAAATGCCAG
CTCCCGGTCTCGATGCCTCTTGGGCTGTAGGACTTAATCAAGCAGTTGCCCAAGGTTTGGCTTTTGGTAAAGACATTTTT
TTTACCTTAGGACCTTATTCTTCAATCTATACAAAATTCTACCATCCAGCTACCGATTTCATGATGGTTGGGGGAAGTTT
GTATTTGGCTTTATGTTACTGGATAGCTATTATCCTTTTAATGCAAGGCATTAAATGGCGTTGGAGTATTGCCTTTGCAA
TACTTCTCTTTAGTATGATCTATGCTCGGGATTCTTTGTTTTTTTCCTATTCATTAATCATTGGCTTACTCATTCATAAA
GAAATTTCTGGAAAAGAAACATCCTTTAAAAGCAATTTCTGCACTTTATTTGCTTTGCTTTTTACGCCATTCGGTTTATT
TCCTCTGATAAAGGGCTCTCTTTTAATATTAAGTATTATTACCGTGCTCTTATGCTCTTTATTTTTGATCCTATATAAAC
AGCGAAATCTTGCTGTGCTTTGTCTGGCATCTCCAGTAGTTTCCATATTATTTTTTTGGATAGCATCCGGGCAATCTATT
TTCAATCTGCCAGCTTATGTCAGTAACACTATCTTGCTCGCATCAGGTTTTACTGAAGCCATGGCAATTGAAGGAGACAA
TAAAGAACTGATATTTTTTGGGGTTACCTCTTCTTGCATTCTCTTATCAATACTCCTGCAAAAACAGCTCTCACCATTAT
CCAAAGCATTTCTATTTTGTATCTATCTCGTTTTTCTTTTCCTCTCATATAAAACGGGTTTCACAAGACATTTTGGCCAT
GCCTTCATTGCTGGTACCTCTGTTTTGCTAGCCTCTTTTTTGTTACCGTATTTTAATTCCAACAACAAAGTAATAGTCCC
ATTATTAGCTTTATCCCTTTATACAGCGAGTTATATCAACGGGCACTATACCAAAATATCTGTTCGAGATAATTTCATTT
CCACCTATACCGCCGCTTACTATGGCCTTAAAAACAGAATCCAGAATAAGAATTGGTTAAAAGAAAATTTTTCATTAACG
ATGAATTATTTGAAAGCCCGCGATGATTTTCCCAGATTACCGGGTACTACCGATATTTATTCTTACAATCAAACTTCATT
AATCGCCTCGGGAATGACATGGTCGCCAAGGCCAATCTTTCAGAGTTATTCCGTTTTTACTGCAAAAATGGCAGAAATCA
ATACGAATTACCTTTTAAGTGAGAACAAACCGGATAACATCCTTTTTAAAGTAGAACCAATTGACAATAGAATTCCTTCA
ATGGAAGACGGAATGAGTTGGCCGATACTGATTAATCATTACCAACCAGTACGGTTAGAAAATGATTTTTTATTTTTAAG
AAAAAAATTAGTCAACAAACCTGTAACATCTTTAGTGCCATTAAAAACAGAAATTCATACTTTTGGAGAACAAGTTAAAA
TACCTGATACAGATAAATCTCTTTTTGTCGAAATAGATATTCAACCAACGCTCTGGGGGATGTTAGCGACTACCTTTTTC
AAGCCTCACCAGCTTGAAGCCAATTTGGAATTAAAAAATGGCACCCAAAGACAATATAGACTCATTTCCAATATGGCAAA
ATCCGGTTTTCTATTATCCCCATTCATAGAAAACAGCGCTGAGTTTGGACTATTATTTAGCCAGAATAATTACCTGGCAG
GTAAAAAGGTTATTTCATTTTCCATTAACTCAAAGCAAGTACCTTCGTCGCACTGGCAAACGAAATATACTATTCATTAT
AAAACTTTTGCCAGCAATAATTAA

Upstream 100 bases:

>100_bases
ATTGAGGTACTATGACTCATTCTGTTGATGGGGAAAGGAAGCGATAAAGTCCTTGTCAATTCAGCAGCAAGGAATGCTAT
GATATGATGCTTGATATGAT

Downstream 100 bases:

>100_bases
AACAACAAGGATGCGTCAATAAAAATAGTGTGCCAAGCTCTTCTTTGTTGATTTTTTGTTTAAATTCCAAACAAATATCT
TCCCAAAAGGAAAATTAACA

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 646

Protein sequence:

>647_residues
MPTKKMTRAQTCPHQTTVISNLKIIPLTLGWLLKSALLIIIIAVFIPLSPKMPAPGLDASWAVGLNQAVAQGLAFGKDIF
FTLGPYSSIYTKFYHPATDFMMVGGSLYLALCYWIAIILLMQGIKWRWSIAFAILLFSMIYARDSLFFSYSLIIGLLIHK
EISGKETSFKSNFCTLFALLFTPFGLFPLIKGSLLILSIITVLLCSLFLILYKQRNLAVLCLASPVVSILFFWIASGQSI
FNLPAYVSNTILLASGFTEAMAIEGDNKELIFFGVTSSCILLSILLQKQLSPLSKAFLFCIYLVFLFLSYKTGFTRHFGH
AFIAGTSVLLASFLLPYFNSNNKVIVPLLALSLYTASYINGHYTKISVRDNFISTYTAAYYGLKNRIQNKNWLKENFSLT
MNYLKARDDFPRLPGTTDIYSYNQTSLIASGMTWSPRPIFQSYSVFTAKMAEINTNYLLSENKPDNILFKVEPIDNRIPS
MEDGMSWPILINHYQPVRLENDFLFLRKKLVNKPVTSLVPLKTEIHTFGEQVKIPDTDKSLFVEIDIQPTLWGMLATTFF
KPHQLEANLELKNGTQRQYRLISNMAKSGFLLSPFIENSAEFGLLFSQNNYLAGKKVISFSINSKQVPSSHWQTKYTIHY
KTFASNN

Sequences:

>Translated_647_residues
MPTKKMTRAQTCPHQTTVISNLKIIPLTLGWLLKSALLIIIIAVFIPLSPKMPAPGLDASWAVGLNQAVAQGLAFGKDIF
FTLGPYSSIYTKFYHPATDFMMVGGSLYLALCYWIAIILLMQGIKWRWSIAFAILLFSMIYARDSLFFSYSLIIGLLIHK
EISGKETSFKSNFCTLFALLFTPFGLFPLIKGSLLILSIITVLLCSLFLILYKQRNLAVLCLASPVVSILFFWIASGQSI
FNLPAYVSNTILLASGFTEAMAIEGDNKELIFFGVTSSCILLSILLQKQLSPLSKAFLFCIYLVFLFLSYKTGFTRHFGH
AFIAGTSVLLASFLLPYFNSNNKVIVPLLALSLYTASYINGHYTKISVRDNFISTYTAAYYGLKNRIQNKNWLKENFSLT
MNYLKARDDFPRLPGTTDIYSYNQTSLIASGMTWSPRPIFQSYSVFTAKMAEINTNYLLSENKPDNILFKVEPIDNRIPS
MEDGMSWPILINHYQPVRLENDFLFLRKKLVNKPVTSLVPLKTEIHTFGEQVKIPDTDKSLFVEIDIQPTLWGMLATTFF
KPHQLEANLELKNGTQRQYRLISNMAKSGFLLSPFIENSAEFGLLFSQNNYLAGKKVISFSINSKQVPSSHWQTKYTIHY
KTFASNN
>Mature_646_residues
PTKKMTRAQTCPHQTTVISNLKIIPLTLGWLLKSALLIIIIAVFIPLSPKMPAPGLDASWAVGLNQAVAQGLAFGKDIFF
TLGPYSSIYTKFYHPATDFMMVGGSLYLALCYWIAIILLMQGIKWRWSIAFAILLFSMIYARDSLFFSYSLIIGLLIHKE
ISGKETSFKSNFCTLFALLFTPFGLFPLIKGSLLILSIITVLLCSLFLILYKQRNLAVLCLASPVVSILFFWIASGQSIF
NLPAYVSNTILLASGFTEAMAIEGDNKELIFFGVTSSCILLSILLQKQLSPLSKAFLFCIYLVFLFLSYKTGFTRHFGHA
FIAGTSVLLASFLLPYFNSNNKVIVPLLALSLYTASYINGHYTKISVRDNFISTYTAAYYGLKNRIQNKNWLKENFSLTM
NYLKARDDFPRLPGTTDIYSYNQTSLIASGMTWSPRPIFQSYSVFTAKMAEINTNYLLSENKPDNILFKVEPIDNRIPSM
EDGMSWPILINHYQPVRLENDFLFLRKKLVNKPVTSLVPLKTEIHTFGEQVKIPDTDKSLFVEIDIQPTLWGMLATTFFK
PHQLEANLELKNGTQRQYRLISNMAKSGFLLSPFIENSAEFGLLFSQNNYLAGKKVISFSINSKQVPSSHWQTKYTIHYK
TFASNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73112; Mature: 72981

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTKKMTRAQTCPHQTTVISNLKIIPLTLGWLLKSALLIIIIAVFIPLSPKMPAPGLDAS
CCCCCCCHHHCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
WAVGLNQAVAQGLAFGKDIFFTLGPYSSIYTKFYHPATDFMMVGGSLYLALCYWIAIILL
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCHHHEEECHHHHHHHHHHHHHHHH
MQGIKWRWSIAFAILLFSMIYARDSLFFSYSLIIGLLIHKEISGKETSFKSNFCTLFALL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
FTPFGLFPLIKGSLLILSIITVLLCSLFLILYKQRNLAVLCLASPVVSILFFWIASGQSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCE
FNLPAYVSNTILLASGFTEAMAIEGDNKELIFFGVTSSCILLSILLQKQLSPLSKAFLFC
EECCHHHCCEEEEECCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCHHHHHHHHH
IYLVFLFLSYKTGFTRHFGHAFIAGTSVLLASFLLPYFNSNNKVIVPLLALSLYTASYIN
HHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCC
GHYTKISVRDNFISTYTAAYYGLKNRIQNKNWLKENFSLTMNYLKARDDFPRLPGTTDIY
CEEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
SYNQTSLIASGMTWSPRPIFQSYSVFTAKMAEINTNYLLSENKPDNILFKVEPIDNRIPS
CCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCC
MEDGMSWPILINHYQPVRLENDFLFLRKKLVNKPVTSLVPLKTEIHTFGEQVKIPDTDKS
CCCCCCCCEEEECCCCEEECCHHHHHHHHHHCCCHHHHCCCHHHHHHCCCEEECCCCCCE
LFVEIDIQPTLWGMLATTFFKPHQLEANLELKNGTQRQYRLISNMAKSGFLLSPFIENSA
EEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEECHHHCCCC
EFGLLFSQNNYLAGKKVISFSINSKQVPSSHWQTKYTIHYKTFASNN
CEEEEEECCCEECCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCC
>Mature Secondary Structure 
PTKKMTRAQTCPHQTTVISNLKIIPLTLGWLLKSALLIIIIAVFIPLSPKMPAPGLDAS
CCCCCCHHHCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
WAVGLNQAVAQGLAFGKDIFFTLGPYSSIYTKFYHPATDFMMVGGSLYLALCYWIAIILL
HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCHHHEEECHHHHHHHHHHHHHHHH
MQGIKWRWSIAFAILLFSMIYARDSLFFSYSLIIGLLIHKEISGKETSFKSNFCTLFALL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
FTPFGLFPLIKGSLLILSIITVLLCSLFLILYKQRNLAVLCLASPVVSILFFWIASGQSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCE
FNLPAYVSNTILLASGFTEAMAIEGDNKELIFFGVTSSCILLSILLQKQLSPLSKAFLFC
EECCHHHCCEEEEECCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCHHHHHHHHH
IYLVFLFLSYKTGFTRHFGHAFIAGTSVLLASFLLPYFNSNNKVIVPLLALSLYTASYIN
HHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCC
GHYTKISVRDNFISTYTAAYYGLKNRIQNKNWLKENFSLTMNYLKARDDFPRLPGTTDIY
CEEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
SYNQTSLIASGMTWSPRPIFQSYSVFTAKMAEINTNYLLSENKPDNILFKVEPIDNRIPS
CCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCC
MEDGMSWPILINHYQPVRLENDFLFLRKKLVNKPVTSLVPLKTEIHTFGEQVKIPDTDKS
CCCCCCCCEEEECCCCEEECCHHHHHHHHHHCCCHHHHCCCHHHHHHCCCEEECCCCCCE
LFVEIDIQPTLWGMLATTFFKPHQLEANLELKNGTQRQYRLISNMAKSGFLLSPFIENSA
EEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEECHHHCCCC
EFGLLFSQNNYLAGKKVISFSINSKQVPSSHWQTKYTIHYKTFASNN
CEEEEEECCCEECCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA