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The map label for this gene is yebA [C]

Identifier: 52840809

GI number: 52840809

Start: 605145

End: 606578

Strand: Reverse

Name: yebA [C]

Synonym: lpg0567

Alternate gene names: 52840809

Gene position: 606578-605145 (Counterclockwise)

Preceding gene: 52840811

Following gene: 52840806

Centisome position: 17.85

GC content: 37.59

Gene sequence:

>1434_bases
ATGGATAAAAGACCGAATATACCAAAAAGAAAATCTGGTAACTCATCAAAGCTATTAGCGTTTTTTGCGTTGGTATTTGC
CTTTTCGCTTCCGTATTTGCTAGTGAAAAATTTTTCACACCCTAAACGAAGCAGTTATGCTGACCAAACTGATTTATACC
CCGAACTATCAGACGAGTTATCAAGAGATATACCTGCTGAAGCTTCCACGGAAATTCCGCATGAAAAACCTGATATTAAA
TCTGCTACAAAACCTATGCAAACAAAGCAAGATCAGCAAGACAAACCAATCAATACAAGTCATGTAAAAAAAGATAATGA
ATGGCAAATAGTCAATCCTCATTCAGGAGATTCTATGGCGACCATTTTCCATAGGCTAGGACTAACCGCGCAAAATTTAA
ATGATGTGATAAAAAATAACCCGCACGCCAAGATGCTTACAAGAATCAAACCCAACCAGAAATTACAATTTTTAATTAAA
AAAAATAAATTGGAAAAATTAATTGTTCCTGTAAACACCATTCAAACACTAACAGTTTATCGCGCAGGGAAAATATACAA
AACCAAAATTGACTCAAAAAAAACAACCACTCAAAATCGTTATGTGACTGCAACAGTCCAAGGTTCTTTGTATACAACAG
CCCAACGATTTAACATCCCCTCAAAATTAGTCCGTCAAATGACCACTATCTTTAACAAAGAAATTGATTTTTCCAGATCT
TTGCGCTCCGGAGATCAATTCTCGATAATTTATGATGCTTATTACATTGAAGATAAAATGGTTGGAGTAGGAGACATTCT
GGTAGTAACGTATACTAATCGTGGAAAAACTTATCAAGCAATACGTCATACTAACGCTCATGGTGAGCAAGACTATTTTA
CCCCACAAGGCACCAGCTTTAAAAAAGCCTTCACTCGATATCCAATTAAATTTAGCCATATAAGCTCGACTTTTGCTTTA
TCGAGATACCACCCAATTCTTCATTACAGACGAGCGCACAAAGGTATCGATTTGGCTGCCCCGATTGGAACACCAATACA
TGCTACCGGCGATGGGGTTATTACAATCATCGATAGGCATAACGGATATGGCAATATGATTAAAATTAAGCATGATAAAA
CATACAGCACTATTTATGGGCATTTACTCAAATTCCAGAAAGGTCTATCAAAAGGCAGTAGAGTAAAACGAGGTCAAGTA
ATTGGTTATGTAGGACAAACCGGCCTGGCAACCGGACCTCATTGCCATTATGAGCTTCATGTCAATAATCAGCCAAGAAA
CCCAACTACAATAAGCTTGCCTACTGCAGCACCAGTACCAGCAAGAGAAATGGCAGCATTCAAAGCAAAAGCCAGTACAC
TTTTAGCCCGTCTAAAACTTTTCGAGCAAGCGCAATTAGCAAGTAAAGGGAAAAAGAAAGTTAACGTTGGATAA

Upstream 100 bases:

>100_bases
AGTTGACTCAAGGTAGCGGTCACTTCCAAATAATGACTGTGATATATTGATTGAAATTTAAATAGCAGCATTTTTCAGAT
GACGGCAATATAGGCAAAAA

Downstream 100 bases:

>100_bases
AAACTGTGCGTTGGATTTTTCCATACCCCAATACCTAATCTAAATGACAGCAGACACTTCTTTATAAAGCGAGTAAGCTC
CAAGTAATTCAAACATAACG

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDELSRDIPAEASTEIPHEKPDIK
SATKPMQTKQDQQDKPINTSHVKKDNEWQIVNPHSGDSMATIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIK
KNKLEKLIVPVNTIQTLTVYRAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSRS
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNRGKTYQAIRHTNAHGEQDYFTPQGTSFKKAFTRYPIKFSHISSTFAL
SRYHPILHYRRAHKGIDLAAPIGTPIHATGDGVITIIDRHNGYGNMIKIKHDKTYSTIYGHLLKFQKGLSKGSRVKRGQV
IGYVGQTGLATGPHCHYELHVNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKVNVG

Sequences:

>Translated_477_residues
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDELSRDIPAEASTEIPHEKPDIK
SATKPMQTKQDQQDKPINTSHVKKDNEWQIVNPHSGDSMATIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIK
KNKLEKLIVPVNTIQTLTVYRAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSRS
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNRGKTYQAIRHTNAHGEQDYFTPQGTSFKKAFTRYPIKFSHISSTFAL
SRYHPILHYRRAHKGIDLAAPIGTPIHATGDGVITIIDRHNGYGNMIKIKHDKTYSTIYGHLLKFQKGLSKGSRVKRGQV
IGYVGQTGLATGPHCHYELHVNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKVNVG
>Mature_477_residues
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDELSRDIPAEASTEIPHEKPDIK
SATKPMQTKQDQQDKPINTSHVKKDNEWQIVNPHSGDSMATIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIK
KNKLEKLIVPVNTIQTLTVYRAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSRS
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNRGKTYQAIRHTNAHGEQDYFTPQGTSFKKAFTRYPIKFSHISSTFAL
SRYHPILHYRRAHKGIDLAAPIGTPIHATGDGVITIIDRHNGYGNMIKIKHDKTYSTIYGHLLKFQKGLSKGSRVKRGQV
IGYVGQTGLATGPHCHYELHVNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKVNVG

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=448, Percent_Identity=27.4553571428571, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 53780; Mature: 53780

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDEL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
SRDIPAEASTEIPHEKPDIKSATKPMQTKQDQQDKPINTSHVKKDNEWQIVNPHSGDSMA
HHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCHHH
TIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIKKNKLEKLIVPVNTIQTLTVY
HHHHHHCCCHHHHHHHHHCCCCHHHHEECCCCCCEEEEEHHCCCCEEEECCCHHEEEEEE
RAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSRS
ECCCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHCCCHHHHHHHHHHHHCCCCCHHHH
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNRGKTYQAIRHTNAHGEQDYFTPQGTSF
HCCCCCEEEEEEEEEECCCEECCCCEEEEEEECCCCEEHHHHCCCCCCCCCCCCCCCCCH
KKAFTRYPIKFSHISSTFALSRYHPILHYRRAHKGIDLAAPIGTPIHATGDGVITIIDRH
HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCCEEEEEECC
NGYGNMIKIKHDKTYSTIYGHLLKFQKGLSKGSRVKRGQVIGYVGQTGLATGPHCHYELH
CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
VNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKVNVG
ECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDKRPNIPKRKSGNSSKLLAFFALVFAFSLPYLLVKNFSHPKRSSYADQTDLYPELSDEL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
SRDIPAEASTEIPHEKPDIKSATKPMQTKQDQQDKPINTSHVKKDNEWQIVNPHSGDSMA
HHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCHHH
TIFHRLGLTAQNLNDVIKNNPHAKMLTRIKPNQKLQFLIKKNKLEKLIVPVNTIQTLTVY
HHHHHHCCCHHHHHHHHHCCCCHHHHEECCCCCCEEEEEHHCCCCEEEECCCHHEEEEEE
RAGKIYKTKIDSKKTTTQNRYVTATVQGSLYTTAQRFNIPSKLVRQMTTIFNKEIDFSRS
ECCCEEEEECCCCCCCCCCEEEEEEECCCEEEHHHHCCCHHHHHHHHHHHHCCCCCHHHH
LRSGDQFSIIYDAYYIEDKMVGVGDILVVTYTNRGKTYQAIRHTNAHGEQDYFTPQGTSF
HCCCCCEEEEEEEEEECCCEECCCCEEEEEEECCCCEEHHHHCCCCCCCCCCCCCCCCCH
KKAFTRYPIKFSHISSTFALSRYHPILHYRRAHKGIDLAAPIGTPIHATGDGVITIIDRH
HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCCEEEEEECC
NGYGNMIKIKHDKTYSTIYGHLLKFQKGLSKGSRVKRGQVIGYVGQTGLATGPHCHYELH
CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE
VNNQPRNPTTISLPTAAPVPAREMAAFKAKASTLLARLKLFEQAQLASKGKKKVNVG
ECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]